◆◆◆RE_03F12 detail◆◆◆

Code name	RE_03F12
Locus	AT5G09460
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	->RE_0278(0420_塩基配列100%一致)
sequence	>RE_03F12_978bp ATGCCTCTTGATACCAAACAGCAGAAATGGTTGCCATTAGGCTTAAATCCTCAAGCTTGTGTCCAGGACAAGGCGACTGAGTATTTCCGTCCTGGAATTC CTTTTCCGGAACTCGGTAAAGTTTATGCAGCTGAGCATCAGTTTCGCTATTTGCAGCCACCGTTCCAAGCCTTATTGTCTAGATATGATCAGCAGTCTTG TGGAAAACAAGTTTCATGTTTGAATGGGCGATCTAGCAACGGTGCTGCTCCAGAGGGGGCACTCAAGTCTTCTCGGAAAAGATTTATAGTATTCGATCAG TCGGGAGAGCAGACTCGTTTGTTACAATGTGGATTTCCTCTGCGGTTTCCTTCTTCTATGGATGCAGAGCGAGGGAACATTCTCGGTGCCCTACACCCAG AGAAAGGGTTTAGTAAAGATCATGCCATTCAAGAAAAGATATTGCAACATGGAGATCATGAAAATGGCGAAGAAGACTCGGAAATGCACGAAGACACTGA GGAAATCAACGCGTTACTGTATTCTGATGATGACGATAATGATGATTGGGAAAGTGATGATGAAGTAATGAGCACTGGTCACTCTCCATTCACAGTTGAA CAACAAGCGTGCAACATAACAACAGAAGAGCTGGATGAAACTGAAAGCACTGTTGATGGTCCACTTCTTAAAAGACAGAAACTACTGGACCATTCGTACA GAGACTCATCACCATCCCTTGTGGGCACCACTAAAGTCAAAGGCTTATCAGATGAAAACCTTCCTGAATCAAACATTTCAAGCAAACAAGAAACGGGTTC TGGTTTGAGCGACGAGCAGTCAAGAAAAGACAAGATTCACACCGCTCTGAGAATCCTGGAGAGTGTAGTTCCAGGGGCAAAGGGAAAAGAAGCTCTTTTA CTACTAGACGAAGCCATTGATTACCTCAAGTTGCTGAAGCAAAGCTTAAACTCATCAAAGGGTTTGAATAACCATTGG >RE_03F12_translated MPLDTKQQKWLPLGLNPQACVQDKATEYFRPGIPFPELGKVYAAEHQFRYLQPPFQALLSRYDQQSCGKQVSCLNGRSSNGAAPEGALKSSRKRFIVFDQ SGEQTRLLQCGFPLRFPSSMDAERGNILGALHPEKGFSKDHAIQEKILQHGDHENGEEDSEMHEDTEEINALLYSDDDDNDDWESDDEVMSTGHSPFTVE QQACNITTEELDETESTVDGPLLKRQKLLDHSYRDSSPSLVGTTKVKGLSDENLPESNISSKQETGSGLSDEQSRKDKIHTALRILESVVPGAKGKEALL LLDEAIDYLKLLKQSLNSSKGLNNHW
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 977/978 (99.9%)（アミノ酸配列で325/326 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G09 ATGCCTCTTGATACCAAACAGCAGAAATGGTTGCCATTAGGCTTAAATCCTCAAGCTTGTGTCCAGGACAAGGCGACTGAGTATTTCCGTCCTGGAATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F ATGCCTCTTGATACCAAACAGCAGAAATGGTTGCCATTAGGCTTAAATCCTCAAGCTTGTGTCCAGGACAAGGCGACTGAGTATTTCCGTCCTGGAATTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G09 CTTTTCCGGAACTCGGTAAAGTTTATGCAGCTGAGCATCAGTTTCGCTATTTGCAGCCACCGTTCCAAGCCTTATTGTCTAGATATGATCAGCAGTCTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F CTTTTCCGGAACTCGGTAAAGTTTATGCAGCTGAGCATCAGTTTCGCTATTTGCAGCCACCGTTCCAAGCCTTATTGTCTAGATATGATCAGCAGTCTTG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G09 TGGAAAACAAGTTTCATGTTTGAATGGGCGATCTAGCAACGGTGCTGCTCCAGAGGGGGCACTCAAGTCTTCTCGGAAAAGATTTATAGTATTCGATCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F TGGAAAACAAGTTTCATGTTTGAATGGGCGATCTAGCAACGGTGCTGCTCCAGAGGGGGCACTCAAGTCTTCTCGGAAAAGATTTATAGTATTCGATCAG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G09 TCGGGAGAGCAGACTCGTTTGTTACAATGTGGATTTCCTCTGCGGTTTCCTTCTTCTATGGATGCAGAGCGAGGGAACATTCTCGGTGCCCTACACCCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F TCGGGAGAGCAGACTCGTTTGTTACAATGTGGATTTCCTCTGCGGTTTCCTTCTTCTATGGATGCAGAGCGAGGGAACATTCTCGGTGCCCTACACCCAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G09 AGAAAGGGTTTAGTAAAGATCATGCCATTCAAGAAAAGATATTGCAACATGAAGATCATGAAAATGGCGAAGAAGACTCGGAAATGCACGAAGACACTGA ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: RE_03F AGAAAGGGTTTAGTAAAGATCATGCCATTCAAGAAAAGATATTGCAACATGGAGATCATGAAAATGGCGAAGAAGACTCGGAAATGCACGAAGACACTGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G09 GGAAATCAACGCGTTACTGTATTCTGATGATGACGATAATGATGATTGGGAAAGTGATGATGAAGTAATGAGCACTGGTCACTCTCCATTCACAGTTGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F GGAAATCAACGCGTTACTGTATTCTGATGATGACGATAATGATGATTGGGAAAGTGATGATGAAGTAATGAGCACTGGTCACTCTCCATTCACAGTTGAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G09 CAACAAGCGTGCAACATAACAACAGAAGAGCTGGATGAAACTGAAAGCACTGTTGATGGTCCACTTCTTAAAAGACAGAAACTACTGGACCATTCGTACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F CAACAAGCGTGCAACATAACAACAGAAGAGCTGGATGAAACTGAAAGCACTGTTGATGGTCCACTTCTTAAAAGACAGAAACTACTGGACCATTCGTACA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G09 GAGACTCATCACCATCCCTTGTGGGCACCACTAAAGTCAAAGGCTTATCAGATGAAAACCTTCCTGAATCAAACATTTCAAGCAAACAAGAAACGGGTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F GAGACTCATCACCATCCCTTGTGGGCACCACTAAAGTCAAAGGCTTATCAGATGAAAACCTTCCTGAATCAAACATTTCAAGCAAACAAGAAACGGGTTC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G09 TGGTTTGAGCGACGAGCAGTCAAGAAAAGACAAGATTCACACCGCTCTGAGAATCCTGGAGAGTGTAGTTCCAGGGGCAAAGGGAAAAGAAGCTCTTTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F TGGTTTGAGCGACGAGCAGTCAAGAAAAGACAAGATTCACACCGCTCTGAGAATCCTGGAGAGTGTAGTTCCAGGGGCAAAGGGAAAAGAAGCTCTTTTA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 AT5G09 CTACTAGACGAAGCCATTGATTACCTCAAGTTGCTGAAGCAAAGCTTAAACTCATCAAAGGGTTTGAATAACCATTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F CTACTAGACGAAGCCATTGATTACCTCAAGTTGCTGAAGCAAAGCTTAAACTCATCAAAGGGTTTGAATAACCATTGG 910 920 930 940 950 960 970 10 20 30 40 50 60 70 80 90 100 AT5G09 MPLDTKQQKWLPLGLNPQACVQDKATEYFRPGIPFPELGKVYAAEHQFRYLQPPFQALLSRYDQQSCGKQVSCLNGRSSNGAAPEGALKSSRKRFIVFDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F MPLDTKQQKWLPLGLNPQACVQDKATEYFRPGIPFPELGKVYAAEHQFRYLQPPFQALLSRYDQQSCGKQVSCLNGRSSNGAAPEGALKSSRKRFIVFDQ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G09 SGEQTRLLQCGFPLRFPSSMDAERGNILGALHPEKGFSKDHAIQEKILQHEDHENGEEDSEMHEDTEEINALLYSDDDDNDDWESDDEVMSTGHSPFTVE :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F SGEQTRLLQCGFPLRFPSSMDAERGNILGALHPEKGFSKDHAIQEKILQHGDHENGEEDSEMHEDTEEINALLYSDDDDNDDWESDDEVMSTGHSPFTVE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G09 QQACNITTEELDETESTVDGPLLKRQKLLDHSYRDSSPSLVGTTKVKGLSDENLPESNISSKQETGSGLSDEQSRKDKIHTALRILESVVPGAKGKEALL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03F QQACNITTEELDETESTVDGPLLKRQKLLDHSYRDSSPSLVGTTKVKGLSDENLPESNISSKQETGSGLSDEQSRKDKIHTALRILESVVPGAKGKEALL 210 220 230 240 250 260 270 280 290 300 310 320 AT5G09 LLDEAIDYLKLLKQSLNSSKGLNNHW :::::::::::::::::::::::::: RE_03F LLDEAIDYLKLLKQSLNSSKGLNNHW 310 320

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