◆◆◆RE_03G01 detail◆◆◆

Code name	RE_03G01
Locus	AT5G10570
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_03G01_945bp ATGGAAACGGAATTGACGCAATTGAGAAAACAAGAAAGCAACAATCTCAACGGCGTTAATGGAGGATTCATGGCGATTGACCAATTCGTCCCAAATGATT GGAACTTCGATTACCTCTGTTTCAACAATCTTCTCCAAGAAGACGACAACATTGATCATCCTTCTTCTTCTTCTTTGATGAATCTAATTTCTCAGCCACC TCCATTGCTTCATCAACCACCACAACCGTCGTCACCTCTTTATGATTCTCCGCCGCTCTCCTCCGCTTTCGACTATCCTTTTCTCGAGGATATCATACAC TCCTCTTATTCTCCTCCTCCATTGATCCTTCCGGCTTCGCAAGAGAACACCAACAATTACTCACCATTGATGGAGGAAAGCAAGAGCTTCATAAGCATCG GAGAGACTAACAAGAAAAGGAGTAACAAGAAGCTTGAAGGTCAGCCTTCGAAGAATCTTATGGCGGAGAGACGGCGGAGGAAACGGTTAAATGACCGACT CTCCCTGCTCCGATCCATTGTCCCTAAAATCACCAAGATGGATAGGACATCGATACTAGGAGATGCAATAGATTACATGAAGGAGCTTTTGGACAAGATT AACAAGTTGCAAGAAGACGAACAAGAACTTGGAAGCAACTCTCATCTAAGCACCCTCATTACAAACGAATCTACGGTCAGAAACTCCCTAAAGTTTGAAG TAGATCAAAGGGAAGTTAATACGCATATTGATATATGTTGTCCTACGAAACCGGGTTTGGTTGTATCAACGGTTAGTACATTGGAGACTCTAGGATTAGA GATTGAACAATGTGTCATTAGCTGCTTCAGTGACTTCTCATTGCAGGCTTCTTGTTTTGAGGTTGGTGAGCAGAGATACATGGTTACTTCGGAAGCTACT AAACAAGCACTAATCAGAAACGCAGGTTATGGAGGAAGATGTCTG >RE_03G01_translated METELTQLRKQESNNLNGVNGGFMAIDQFVPNDWNFDYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQPPQPSSPLYDSPPLSSAFDYPFLEDIIH SSYSPPPLILPASQENTNNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI NKLQEDEQELGSNSHLSTLITNESTVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEAT KQALIRNAGYGGRCL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 944/945 (99.9%)（アミノ酸配列で314/315 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G10 ATGGAAACGGAATTGACGCAATTGAGAAAACAAGAAAGCAACAATCTCAACGGCGTTAATGGAGGATTCATGGCGATTGACCAATTCGTCCCAAATGATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G ATGGAAACGGAATTGACGCAATTGAGAAAACAAGAAAGCAACAATCTCAACGGCGTTAATGGAGGATTCATGGCGATTGACCAATTCGTCCCAAATGATT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G10 GGAACTTCGATTACCTCTGTTTCAACAATCTTCTCCAAGAAGACGACAACATTGATCATCCTTCTTCTTCTTCTTTGATGAATCTAATTTCTCAGCCACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G GGAACTTCGATTACCTCTGTTTCAACAATCTTCTCCAAGAAGACGACAACATTGATCATCCTTCTTCTTCTTCTTTGATGAATCTAATTTCTCAGCCACC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G10 TCCATTGCTTCATCAACCACCACAACCGTCGTCACCTCTTTATGATTCTCCGCCGCTCTCCTCCGCTTTCGACTATCCTTTTCTCGAGGATATCATACAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TCCATTGCTTCATCAACCACCACAACCGTCGTCACCTCTTTATGATTCTCCGCCGCTCTCCTCCGCTTTCGACTATCCTTTTCTCGAGGATATCATACAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G10 TCCTCTTATTCTCCTCCTCCATTGATCCTTCCGGCTTCGCAAGAGAACACCAACAATTACTCACCATTGATGGAGGAAAGCAAGAGCTTCATAAGCATCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TCCTCTTATTCTCCTCCTCCATTGATCCTTCCGGCTTCGCAAGAGAACACCAACAATTACTCACCATTGATGGAGGAAAGCAAGAGCTTCATAAGCATCG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G10 GAGAGACTAACAAGAAAAGGAGTAACAAGAAGCTTGAAGGTCAGCCTTCGAAGAATCTTATGGCGGAGAGACGGCGGAGGAAACGGTTAAATGACCGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G GAGAGACTAACAAGAAAAGGAGTAACAAGAAGCTTGAAGGTCAGCCTTCGAAGAATCTTATGGCGGAGAGACGGCGGAGGAAACGGTTAAATGACCGACT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G10 CTCCCTGCTCCGATCCATTGTCCCTAAAATCACCAAGATGGATAGGACATCGATACTAGGAGATGCAATAGATTACATGAAGGAGCTTTTGGACAAGATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G CTCCCTGCTCCGATCCATTGTCCCTAAAATCACCAAGATGGATAGGACATCGATACTAGGAGATGCAATAGATTACATGAAGGAGCTTTTGGACAAGATT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G10 AACAAGTTGCAAGAAGACGAACAAGAACTTGGAAGCAACTCTCATCTAAGCACCCTCATTACAAACGAATCTATGGTCAGAAACTCCCTAAAGTTTGAAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: RE_03G AACAAGTTGCAAGAAGACGAACAAGAACTTGGAAGCAACTCTCATCTAAGCACCCTCATTACAAACGAATCTACGGTCAGAAACTCCCTAAAGTTTGAAG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G10 TAGATCAAAGGGAAGTTAATACGCATATTGATATATGTTGTCCTACGAAACCGGGTTTGGTTGTATCAACGGTTAGTACATTGGAGACTCTAGGATTAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TAGATCAAAGGGAAGTTAATACGCATATTGATATATGTTGTCCTACGAAACCGGGTTTGGTTGTATCAACGGTTAGTACATTGGAGACTCTAGGATTAGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G10 GATTGAACAATGTGTCATTAGCTGCTTCAGTGACTTCTCATTGCAGGCTTCTTGTTTTGAGGTTGGTGAGCAGAGATACATGGTTACTTCGGAAGCTACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G GATTGAACAATGTGTCATTAGCTGCTTCAGTGACTTCTCATTGCAGGCTTCTTGTTTTGAGGTTGGTGAGCAGAGATACATGGTTACTTCGGAAGCTACT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 AT5G10 AAACAAGCACTAATCAGAAACGCAGGTTATGGAGGAAGATGTCTG ::::::::::::::::::::::::::::::::::::::::::::: RE_03G AAACAAGCACTAATCAGAAACGCAGGTTATGGAGGAAGATGTCTG 910 920 930 940 10 20 30 40 50 60 70 80 90 100 AT5G10 METELTQLRKQESNNLNGVNGGFMAIDQFVPNDWNFDYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQPPQPSSPLYDSPPLSSAFDYPFLEDIIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G METELTQLRKQESNNLNGVNGGFMAIDQFVPNDWNFDYLCFNNLLQEDDNIDHPSSSSLMNLISQPPPLLHQPPQPSSPLYDSPPLSSAFDYPFLEDIIH 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G10 SSYSPPPLILPASQENTNNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G SSYSPPPLILPASQENTNNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKI 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G10 NKLQEDEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEAT :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G NKLQEDEQELGSNSHLSTLITNESTVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEAT 210 220 230 240 250 260 270 280 290 300 310 AT5G10 KQALIRNAGYGGRCL ::::::::::::::: RE_03G KQALIRNAGYGGRCL 310

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