◆◆◆RE_03G08 detail◆◆◆

Code name	RE_03G08
Locus	AT5G65590
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_03G08_948bp ATGTCCTCCCATACCAATCTCCCCTCTCCCAAACCAGTTCCTAAACCAGATCACCGTATCTCCGGTACATCCCAAACCAAGAAACCACCGTCTTCCTCCG TAGCTCAAGACCAACAAAACCTAAAATGCCCTCGTTGCAACTCTCCAAACACAAAGTTCTGTTACTACAACAACTACAGTCTCTCTCAACCTCGTCACTT CTGCAAATCTTGTCGCCGTTACTGGACACGTGGCGGTGCTCTAAGAAACGTCCCCATCGGTGGTGGTTGCCGGAAAACCAAAAAATCTATCAAACCTAAT TCCTCCATGAACACACTTCCTTCGTCTTCTTCCTCTCAGAGGTTCTTCTCATCAATCATGGAAGATTCATCCAAATTCTTCCCTCCTCCGACAACAATGG ATTTTCAGCTGGCCGGATTATCTCCCAACAAAATGAACGATCTTCAACTTTTGAATAACCAAGAAGTTCTTGATCTTAGGCCCATGATGTCCTCGGGCCG AGAAAACACACCCGTTGATGTCGGGTCGGGTTTATCCCTAATGGGTTTTGGAGATTTCAACAACAACCATTCACCGACGGGGTTCACAACCGCCGGAGCA AGCGACGGAAACTTAGCTTCTTCTATAGAGACTTTGAGTTGTTTAAACCAAGATTTACACTGGAGGCTTCAGCAACAGAGGATGGCGATGCTTTTTGGTA ATTCTAAGGAAGAAACTGTTGTCGTCGAGAGGCCACAACCTATTCTTTATCGGAATCTTGAGATCGTAAACTCATCATCGCCGTCGTCGCCGACGAAGAA AGGAGATAATCAGACAGAGTGGTATTTTGGTAATAACAGTGATAATGAAGGAGTGATTAGTAATAATGCTAATACAGGAGGAGGAGGAAGTGAATGGAAC AATGGAATTCAAGCTTGGACTGATCTTAATCATTATAATGCATTGCCT >RE_03G08_translated MSSHTNLPSPKPVPKPDHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPN SSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSPNKMNDLQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTTAGA SDGNLASSIETLSCLNQDLHWRLQQQRMAMLFGNSKEETVVVERPQPILYRNLEIVNSSSPSSPTKKGDNQTEWYFGNNSDNEGVISNNANTGGGGSEWN NGIQAWTDLNHYNALP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 947/948 (99.9%)（アミノ酸配列で315/316 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G65 ATGTCCTCCCATACCAATCTCCCCTCTCCCAAACCAGTTCCTAAACCAGATCACCGTATCTCCGGTACATCCCAAACCAAGAAACCACCGTCTTCCTCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G ATGTCCTCCCATACCAATCTCCCCTCTCCCAAACCAGTTCCTAAACCAGATCACCGTATCTCCGGTACATCCCAAACCAAGAAACCACCGTCTTCCTCCG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G65 TAGCTCAAGACCAACAAAACCTAAAATGCCCTCGTTGCAACTCTCCAAACACAAAGTTCTGTTACTACAACAACTACAGTCTCTCTCAACCTCGTCACTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TAGCTCAAGACCAACAAAACCTAAAATGCCCTCGTTGCAACTCTCCAAACACAAAGTTCTGTTACTACAACAACTACAGTCTCTCTCAACCTCGTCACTT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G65 CTGCAAATCTTGTCGCCGTTACTGGACACGTGGCGGTGCTCTAAGAAACGTCCCCATCGGTGGTGGTTGCCGGAAAACCAAAAAATCTATCAAACCTAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G CTGCAAATCTTGTCGCCGTTACTGGACACGTGGCGGTGCTCTAAGAAACGTCCCCATCGGTGGTGGTTGCCGGAAAACCAAAAAATCTATCAAACCTAAT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G65 TCCTCCATGAACACACTTCCTTCGTCTTCTTCCTCTCAGAGGTTCTTCTCATCAATCATGGAAGATTCATCCAAATTCTTCCCTCCTCCGACAACAATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TCCTCCATGAACACACTTCCTTCGTCTTCTTCCTCTCAGAGGTTCTTCTCATCAATCATGGAAGATTCATCCAAATTCTTCCCTCCTCCGACAACAATGG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G65 ATTTTCAGCTGGCCGGATTATCTCTCAACAAAATGAACGATCTTCAACTTTTGAATAACCAAGAAGTTCTTGATCTTAGGCCCATGATGTCCTCGGGCCG :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G ATTTTCAGCTGGCCGGATTATCTCCCAACAAAATGAACGATCTTCAACTTTTGAATAACCAAGAAGTTCTTGATCTTAGGCCCATGATGTCCTCGGGCCG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G65 AGAAAACACACCCGTTGATGTCGGGTCGGGTTTATCCCTAATGGGTTTTGGAGATTTCAACAACAACCATTCACCGACGGGGTTCACAACCGCCGGAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G AGAAAACACACCCGTTGATGTCGGGTCGGGTTTATCCCTAATGGGTTTTGGAGATTTCAACAACAACCATTCACCGACGGGGTTCACAACCGCCGGAGCA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G65 AGCGACGGAAACTTAGCTTCTTCTATAGAGACTTTGAGTTGTTTAAACCAAGATTTACACTGGAGGCTTCAGCAACAGAGGATGGCGATGCTTTTTGGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G AGCGACGGAAACTTAGCTTCTTCTATAGAGACTTTGAGTTGTTTAAACCAAGATTTACACTGGAGGCTTCAGCAACAGAGGATGGCGATGCTTTTTGGTA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G65 ATTCTAAGGAAGAAACTGTTGTCGTCGAGAGGCCACAACCTATTCTTTATCGGAATCTTGAGATCGTAAACTCATCATCGCCGTCGTCGCCGACGAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G ATTCTAAGGAAGAAACTGTTGTCGTCGAGAGGCCACAACCTATTCTTTATCGGAATCTTGAGATCGTAAACTCATCATCGCCGTCGTCGCCGACGAAGAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G65 AGGAGATAATCAGACAGAGTGGTATTTTGGTAATAACAGTGATAATGAAGGAGTGATTAGTAATAATGCTAATACAGGAGGAGGAGGAAGTGAATGGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G AGGAGATAATCAGACAGAGTGGTATTTTGGTAATAACAGTGATAATGAAGGAGTGATTAGTAATAATGCTAATACAGGAGGAGGAGGAAGTGAATGGAAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 AT5G65 AATGGAATTCAAGCTTGGACTGATCTTAATCATTATAATGCATTGCCT :::::::::::::::::::::::::::::::::::::::::::::::: RE_03G AATGGAATTCAAGCTTGGACTGATCTTAATCATTATAATGCATTGCCT 910 920 930 940 10 20 30 40 50 60 70 80 90 100 AT5G65 MSSHTNLPSPKPVPKPDHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G MSSHTNLPSPKPVPKPDHRISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPN 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G65 SSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSLNKMNDLQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTTAGA ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G SSMNTLPSSSSSQRFFSSIMEDSSKFFPPPTTMDFQLAGLSPNKMNDLQLLNNQEVLDLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTTAGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G65 SDGNLASSIETLSCLNQDLHWRLQQQRMAMLFGNSKEETVVVERPQPILYRNLEIVNSSSPSSPTKKGDNQTEWYFGNNSDNEGVISNNANTGGGGSEWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G SDGNLASSIETLSCLNQDLHWRLQQQRMAMLFGNSKEETVVVERPQPILYRNLEIVNSSSPSSPTKKGDNQTEWYFGNNSDNEGVISNNANTGGGGSEWN 210 220 230 240 250 260 270 280 290 300 310 AT5G65 NGIQAWTDLNHYNALP :::::::::::::::: RE_03G NGIQAWTDLNHYNALP 310

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