◆◆◆RE_03G09 detail◆◆◆

Code name	RE_03G09
Locus	AT1G51600
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_03G09_906bp ATGGATGACCTACATGGAAGCAATGCTCGAATGCACATTAGAGAAGCTCAAGATCCAATGCATGTGCAATTTGAACATCATGCTTTGCATCACATCCACA ATGGAAGCGGTATGGTTGATGACCAGGCTGATGATGGCAATGCTGGTGGGATGAGTGAGGGTGTGGAAACAGACATTCCTTCTCACCCTGGAAATGTAAC TGACAATCGTGGTGAAGTGGTCGACCGTGGTAGTGAACAAGGAGATCAGTTAACATTGTCTTTTCAGGGCCAAGTCTACGTTTTTGACAGTGTCTTGCCT GAGAAGGTTCAAGCTGTGCTTCTATTATTGGGTGGTCGTGAATTACCTCAGGCAGCCCCTCCTGGCCTAGGATCACCTCATCATAACAACAGAGTATCGA GTTTACCTGGTACTCCTCAAAGGTTTAGTATTCCGCAGCGATTAGCTTCTTTGGTCAGATTTCGAGAGAAACGGAAAGGAAGGAATTTTGATAAGAAGAT TCGGTATACAGTCCGCAAGGAGGTAGCTTTGAGGATGCAACGCAATAAAGGTCAGTTCACATCTGCCAAGTCAAACAATGATGAAGCTGCATCTGCTGGA TCTAGCTGGGGGTCGAATCAAACCTGGGCCATAGAAAGTAGTGAGGCTCAGCATCAAGAGATCTCATGTCGGCACTGTGGAATTGGCGAGAAGTCAACTC CAATGATGCGACGTGGACCTGCCGGGCCAAGAACACTTTGCAATGCATGTGGACTTATGTGGGCAAACAAGGGTGCTTTTAGGGACTTATCCAAAGCCTC TCCTCAAACAGCCCAGAATCTTCCTTTAAATAAGAATGAAGATGCAAATCTTGAGACTGATCATCAAATAATGATAACAGTGGCCAATGACATAAGCAAC TCACAG >RE_03G09_translated MDDLHGSNARMHIREAQDPMHVQFEHHALHHIHNGSGMVDDQADDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLP EKVQAVLLLLGGRELPQAAPPGLGSPHHNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAG SSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLETDHQIMITVANDISN SQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 905/906 (99.9%)（アミノ酸配列で301/302 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G51 ATGGATGACCTACATGGAAGCAATGCTCGAATGCACATTAGAGAAGCTCAAGATCCAATGCATGTGCAATTTGAACATCATGCTTTGCATCACATCCACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G ATGGATGACCTACATGGAAGCAATGCTCGAATGCACATTAGAGAAGCTCAAGATCCAATGCATGTGCAATTTGAACATCATGCTTTGCATCACATCCACA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G51 ATGGAAGCGGTATGGTTGATGACCAGGCTGATGATGGCAATGCTGGTGGGATGAGTGAGGGTGTGGAAACAGACATTCCTTCTCACCCTGGAAATGTAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G ATGGAAGCGGTATGGTTGATGACCAGGCTGATGATGGCAATGCTGGTGGGATGAGTGAGGGTGTGGAAACAGACATTCCTTCTCACCCTGGAAATGTAAC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G51 TGACAATCGTGGTGAAGTGGTCGACCGTGGTAGTGAACAAGGAGATCAGTTAACATTGTCTTTTCAGGGCCAAGTCTACGTTTTTGACAGTGTCTTGCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TGACAATCGTGGTGAAGTGGTCGACCGTGGTAGTGAACAAGGAGATCAGTTAACATTGTCTTTTCAGGGCCAAGTCTACGTTTTTGACAGTGTCTTGCCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G51 GAGAAGGTTCAAGCTGTGCTTCTATTATTGGGTGGTCGTGAATTACCTCAGGCAGCCCCTCCTGGCCTAGGATCACCTCATCAGAACAACAGAGTATCGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: RE_03G GAGAAGGTTCAAGCTGTGCTTCTATTATTGGGTGGTCGTGAATTACCTCAGGCAGCCCCTCCTGGCCTAGGATCACCTCATCATAACAACAGAGTATCGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G51 GTTTACCTGGTACTCCTCAAAGGTTTAGTATTCCGCAGCGATTAGCTTCTTTGGTCAGATTTCGAGAGAAACGGAAAGGAAGGAATTTTGATAAGAAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G GTTTACCTGGTACTCCTCAAAGGTTTAGTATTCCGCAGCGATTAGCTTCTTTGGTCAGATTTCGAGAGAAACGGAAAGGAAGGAATTTTGATAAGAAGAT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G51 TCGGTATACAGTCCGCAAGGAGGTAGCTTTGAGGATGCAACGCAATAAAGGTCAGTTCACATCTGCCAAGTCAAACAATGATGAAGCTGCATCTGCTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TCGGTATACAGTCCGCAAGGAGGTAGCTTTGAGGATGCAACGCAATAAAGGTCAGTTCACATCTGCCAAGTCAAACAATGATGAAGCTGCATCTGCTGGA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G51 TCTAGCTGGGGGTCGAATCAAACCTGGGCCATAGAAAGTAGTGAGGCTCAGCATCAAGAGATCTCATGTCGGCACTGTGGAATTGGCGAGAAGTCAACTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TCTAGCTGGGGGTCGAATCAAACCTGGGCCATAGAAAGTAGTGAGGCTCAGCATCAAGAGATCTCATGTCGGCACTGTGGAATTGGCGAGAAGTCAACTC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G51 CAATGATGCGACGTGGACCTGCCGGGCCAAGAACACTTTGCAATGCATGTGGACTTATGTGGGCAAACAAGGGTGCTTTTAGGGACTTATCCAAAGCCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G CAATGATGCGACGTGGACCTGCCGGGCCAAGAACACTTTGCAATGCATGTGGACTTATGTGGGCAAACAAGGGTGCTTTTAGGGACTTATCCAAAGCCTC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G51 TCCTCAAACAGCCCAGAATCTTCCTTTAAATAAGAATGAAGATGCAAATCTTGAGACTGATCATCAAATAATGATAACAGTGGCCAATGACATAAGCAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G TCCTCAAACAGCCCAGAATCTTCCTTTAAATAAGAATGAAGATGCAAATCTTGAGACTGATCATCAAATAATGATAACAGTGGCCAATGACATAAGCAAC 810 820 830 840 850 860 870 880 890 900 AT1G51 TCACAG :::::: RE_03G TCACAG 10 20 30 40 50 60 70 80 90 100 AT1G51 MDDLHGSNARMHIREAQDPMHVQFEHHALHHIHNGSGMVDDQADDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G MDDLHGSNARMHIREAQDPMHVQFEHHALHHIHNGSGMVDDQADDGNAGGMSEGVETDIPSHPGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLP 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G51 EKVQAVLLLLGGRELPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAG ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G EKVQAVLLLLGGRELPQAAPPGLGSPHHNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G51 SSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLETDHQIMITVANDISN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03G SSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLETDHQIMITVANDISN 210 220 230 240 250 260 270 280 290 300 AT1G51 SQ :: RE_03G SQ

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