◆◆◆RE_03H11 detail◆◆◆

Code name	RE_03H11
Locus	AT1G27650
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_03H11_888bp ATGGCGGAGCATTTGGCTTCAATCTTTGGTACTGAGAAAGACAGAGTGAATTGCCCTTTCTACTTCAAGATTGGCGCTTGCCGTCATGGTGACCGGTGCT CGCGTCTTCACAACCGTCCTACCATCTCCCCAACACTCCTTCTTTCAAACATGTACCAAAGGCCTGACATGATTACCCCTGGTGTTGACGCTCAGGGCCA ACCACTCGACCCGCGTAAGATTCAGGAGCACTTTGAGGATTTCTTTGAGGATCTTTTTGAGGAGCTTGGAAAGTTTGGCGAGATAGAGAGCCTCAACATT TGTGACAACCTTGCTGACCACATGATTGGCAACGTATATGTTCAGTTTAAGGAAGAGGATCAGGCTGCAGCTGCTTTGCAGGCTCTGCAAGGTAGGTTCT ATTCAGGACGTCCCATCATTGCTGATTTCTCTCCTGTGACGGATTTCCGCGAAGCCACGTGTAGGCAGTATGAAGAAAACAACTGCAACCGTGGTGGGTA CTGTAATTTCATGCATGTGAAGCTTGTTTCGAGGGAACTAAGGAGAAAACTCTTTGGGAGATATCGGCGATCATACCGCAGAGGAAGTAGAAGCAGGAGC AGAAGCAGGAGTATTAGCCCCAGGAACAAGAGAGATAATGACCGACGTGATCCTTCTCACAGGGAATTCAGTCATCGGGACAGAGATCGCGAGTTTTACC GTCATGGAAGTGGAAAAAGGAGCAGTGAGAGGTCGGAGAGGCAAGAGAGGGACGGTCCAAGGGGTAGGAGACAAGCAAGCCCTAAACGAGGAGGGAGCCC GGGTGGCGGGAGGGAAGGAAGTGAGGAGAGGAGGGCAAGGATTGAGCAATGGAACAGAGAACGGGAGGAGAAGGAAGAGGGAGGAGCA >RE_03H11_translated MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNI CDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRYRRSYRRGSRSRS RSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKRSSERSERQERDGPRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREEKEEGGA
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 887/888 (99.9%)（アミノ酸配列で295/296 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G27 ATGGCGGAGCATTTGGCTTCAATCTTTGGTACTGAGAAAGACAGAGTGAATTGCCCTTTCTACTTCAAGATTGGCGCTTGCCGTCATGGTGACCGGTGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H ATGGCGGAGCATTTGGCTTCAATCTTTGGTACTGAGAAAGACAGAGTGAATTGCCCTTTCTACTTCAAGATTGGCGCTTGCCGTCATGGTGACCGGTGCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G27 CGCGTCTTCACAACCGTCCTACCATCTCCCCAACACTCCTTCTTTCAAACATGTACCAAAGGCCTGACATGATTACCCCTGGTGTTGACGCTCAGGGCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H CGCGTCTTCACAACCGTCCTACCATCTCCCCAACACTCCTTCTTTCAAACATGTACCAAAGGCCTGACATGATTACCCCTGGTGTTGACGCTCAGGGCCA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G27 ACCACTCGACCCGCGTAAGATTCAGGAGCACTTTGAGGATTTCTTTGAGGATCTTTTTGAGGAGCTTGGAAAGTTTGGCGAGATAGAGAGCCTCAACATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H ACCACTCGACCCGCGTAAGATTCAGGAGCACTTTGAGGATTTCTTTGAGGATCTTTTTGAGGAGCTTGGAAAGTTTGGCGAGATAGAGAGCCTCAACATT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G27 TGTGACAACCTTGCTGACCACATGATTGGCAACGTATATGTTCAGTTTAAGGAAGAGGATCAGGCTGCAGCTGCTTTGCAGGCTCTGCAAGGTAGGTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H TGTGACAACCTTGCTGACCACATGATTGGCAACGTATATGTTCAGTTTAAGGAAGAGGATCAGGCTGCAGCTGCTTTGCAGGCTCTGCAAGGTAGGTTCT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G27 ATTCAGGACGTCCCATCATTGCTGATTTCTCTCCTGTGACGGATTTCCGCGAAGCCACGTGTAGGCAGTATGAAGAAAACAACTGCAACCGTGGTGGGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H ATTCAGGACGTCCCATCATTGCTGATTTCTCTCCTGTGACGGATTTCCGCGAAGCCACGTGTAGGCAGTATGAAGAAAACAACTGCAACCGTGGTGGGTA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G27 CTGTAATTTCATGCATGTGAAGCTTGTTTCGAGGGAACTAAGGAGAAAACTCTTTGGGAGATATCGGCGATCATACCGCAGAGGAAGTAGAAGCAGGAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H CTGTAATTTCATGCATGTGAAGCTTGTTTCGAGGGAACTAAGGAGAAAACTCTTTGGGAGATATCGGCGATCATACCGCAGAGGAAGTAGAAGCAGGAGC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G27 AGAAGCAGGAGTATTAGCCCCAGGAACAAGAGAGATAATGACCGACGTGATCCTTCTCACAGGGAATTCAGTCATCGGGACAGAGATCGCGAGTTTTACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H AGAAGCAGGAGTATTAGCCCCAGGAACAAGAGAGATAATGACCGACGTGATCCTTCTCACAGGGAATTCAGTCATCGGGACAGAGATCGCGAGTTTTACC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G27 GTCATGGAAGTGGAAAAAGGAGCAGTGAGAGGTCGGAGAGGCAAGAGAGGGACGGTTCAAGGGGTAGGAGACAAGCAAGCCCTAAACGAGGAGGGAGCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: RE_03H GTCATGGAAGTGGAAAAAGGAGCAGTGAGAGGTCGGAGAGGCAAGAGAGGGACGGTCCAAGGGGTAGGAGACAAGCAAGCCCTAAACGAGGAGGGAGCCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 AT1G27 GGGTGGCGGGAGGGAAGGAAGTGAGGAGAGGAGGGCAAGGATTGAGCAATGGAACAGAGAACGGGAGGAGAAGGAAGAGGGAGGAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H GGGTGGCGGGAGGGAAGGAAGTGAGGAGAGGAGGGCAAGGATTGAGCAATGGAACAGAGAACGGGAGGAGAAGGAAGAGGGAGGAGCA 810 820 830 840 850 860 870 880 10 20 30 40 50 60 70 80 90 100 AT1G27 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G27 CDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRYRRSYRRGSRSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_03H CDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRYRRSYRRGSRSRS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT1G27 RSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREEKEEGGA :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: RE_03H RSRSISPRNKRDNDRRDPSHREFSHRDRDREFYRHGSGKRSSERSERQERDGPRGRRQASPKRGGSPGGGREGSEERRARIEQWNREREEKEEGGA 210 220 230 240 250 260 270 280 290

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