◆◆◆RE_0401 detail◆◆◆

Code name	RE_0401
Locus	AT2G29660
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0318_アミノ酸配列100%一致
sequence	>RE_0401_1119bp ATGGCGGCTCGAAAACTAGGGTCGTTGTTACGTCAATACTTTTTCTCTCTATGCTTCCTCTTCCTCGGTTGCTTCTTCTTCCCTAAAGACGCAGACTATA AACAAAAGAGAAGAAAGAAAAAGCTTAGAAGAGTTTCTTCTTCTTCTGGTTCATCTCTATCCTCTTCTTGGACGTATTTAAAACGAGTTTTCTTATCCAC GACAAGGATATCCAAATCCCGTAACCAAACACATCCTAACGTTACTTTAACATCCGCAAGATCATCTCAAAACTCCCTCGTCACTCTCGTCCAACCCGAT ACCACAAACCAACCCGACCCGGAAACACGTATTCATCAGCAAACCGAATTCGAGATCTCCTCTTCCGACGAGATTTTCCCTTGTAACTCGTGTGGCGAGA TTTTCCCAAAAATCAATCTCCTCGAGAATCACATCGCGATCAAACACGCCGTGTCGGAGCTAATCGCCGGAGAATCAAGCACGAACATCGTCAAGATCAT ATTCAAATCTGGTTGGCCGGAGCAAGGTAATTACAAATCTCCGGTGATCAATCGAATCTTAAAAATCCACAACAGTTCAAAGATTCTCACCAGATTCGAA GAGTATCGTGAGTTCGTGAAAGCTAAAGCCGCTCGTAGCAACGGCGGTGGAAGACGGTGGGACGATGAACGTTGCGTCGCCGACGGAAACGAACTTTTAC GATTTTACTGCTCGACGTTTATGTGTGATTTAGGGCAAAACGGTAAATCAAATCTCTGTGGTCATCAGTATTGTAGTATCTGTGGTATCATCGGATCTGG ATTCTCGCCGAAGCTCGACGGGATCGCGACGTTGGCGACGGGGTGGAGAGGACACGTGGCGGTTCCGGAGGAGGTTGAAGAAGAGTTTGGGTTTATGAAT GTGAAACGGGCCATGTTGGTTTGTCGGGTTGTAGCGGGTCGGGTCGGGTGTGATTTGATTGATGATGATGACGTGGATAAGAGTGATGGTGGAGGGTATG ATTCTCTGGTTGGGCAGAGTGGGAACAAGAGTGGGGCTCTGTTGAGGATCGACGATGATGAGCTTTTGGTTTTTAATCCAAGGGCTGTGCTTCCTTGTTT TGTTATTGTGTATACTGTG >RE_0401_translated MAARKLGSLLRQYFFSLCFLFLGCFFFPKDADYKQKRRKKKLRRVSSSSGSSLSSSWTYLKRVFLSTTRISKSRNQTHPNVTLTSARSSQNSLVTLVQPD TTNQPDPETRIHQQTEFEISSSDEIFPCNSCGEIFPKINLLENHIAIKHAVSELIAGESSTNIVKIIFKSGWPEQGNYKSPVINRILKIHNSSKILTRFE EYREFVKAKAARSNGGGRRWDDERCVADGNELLRFYCSTFMCDLGQNGKSNLCGHQYCSICGIIGSGFSPKLDGIATLATGWRGHVAVPEEVEEEFGFMN VKRAMLVCRVVAGRVGCDLIDDDDVDKSDGGGYDSLVGQSGNKSGALLRIDDDELLVFNPRAVLPCFVIVYTV
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1118/1119 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G29 ATGGCGGCTCGAAAACTAGGGTCGTTGTTACGTCAATACTTTTTCTCTCTATGCTTCCTCTTCCTCGGTTGCTTCTTCTTCCCTAAAGACGCAGACTATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 ATGGCGGCTCGAAAACTAGGGTCGTTGTTACGTCAATACTTTTTCTCTCTATGCTTCCTCTTCCTCGGTTGCTTCTTCTTCCCTAAAGACGCAGACTATA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G29 AACAAAAGAGAAGAAAGAAGAAGCTTAGAAGAGTTTCTTCTTCTTCTGGTTCATCTCTATCCTCTTCTTGGACGTATTTAAAACGAGTTTTCTTATCCAC ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 AACAAAAGAGAAGAAAGAAAAAGCTTAGAAGAGTTTCTTCTTCTTCTGGTTCATCTCTATCCTCTTCTTGGACGTATTTAAAACGAGTTTTCTTATCCAC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G29 GACAAGGATATCCAAATCCCGTAACCAAACACATCCTAACGTTACTTTAACATCCGCAAGATCATCTCAAAACTCCCTCGTCACTCTCGTCCAACCCGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 GACAAGGATATCCAAATCCCGTAACCAAACACATCCTAACGTTACTTTAACATCCGCAAGATCATCTCAAAACTCCCTCGTCACTCTCGTCCAACCCGAT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G29 ACCACAAACCAACCCGACCCGGAAACACGTATTCATCAGCAAACCGAATTCGAGATCTCCTCTTCCGACGAGATTTTCCCTTGTAACTCGTGTGGCGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 ACCACAAACCAACCCGACCCGGAAACACGTATTCATCAGCAAACCGAATTCGAGATCTCCTCTTCCGACGAGATTTTCCCTTGTAACTCGTGTGGCGAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G29 TTTTCCCAAAAATCAATCTCCTCGAGAATCACATCGCGATCAAACACGCCGTGTCGGAGCTAATCGCCGGAGAATCAAGCACGAACATCGTCAAGATCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 TTTTCCCAAAAATCAATCTCCTCGAGAATCACATCGCGATCAAACACGCCGTGTCGGAGCTAATCGCCGGAGAATCAAGCACGAACATCGTCAAGATCAT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G29 ATTCAAATCTGGTTGGCCGGAGCAAGGTAATTACAAATCTCCGGTGATCAATCGAATCTTAAAAATCCACAACAGTTCAAAGATTCTCACCAGATTCGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 ATTCAAATCTGGTTGGCCGGAGCAAGGTAATTACAAATCTCCGGTGATCAATCGAATCTTAAAAATCCACAACAGTTCAAAGATTCTCACCAGATTCGAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G29 GAGTATCGTGAGTTCGTGAAAGCTAAAGCCGCTCGTAGCAACGGCGGTGGAAGACGGTGGGACGATGAACGTTGCGTCGCCGACGGAAACGAACTTTTAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 GAGTATCGTGAGTTCGTGAAAGCTAAAGCCGCTCGTAGCAACGGCGGTGGAAGACGGTGGGACGATGAACGTTGCGTCGCCGACGGAAACGAACTTTTAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G29 GATTTTACTGCTCGACGTTTATGTGTGATTTAGGGCAAAACGGTAAATCAAATCTCTGTGGTCATCAGTATTGTAGTATCTGTGGTATCATCGGATCTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 GATTTTACTGCTCGACGTTTATGTGTGATTTAGGGCAAAACGGTAAATCAAATCTCTGTGGTCATCAGTATTGTAGTATCTGTGGTATCATCGGATCTGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G29 ATTCTCGCCGAAGCTCGACGGGATCGCGACGTTGGCGACGGGGTGGAGAGGACACGTGGCGGTTCCGGAGGAGGTTGAAGAAGAGTTTGGGTTTATGAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 ATTCTCGCCGAAGCTCGACGGGATCGCGACGTTGGCGACGGGGTGGAGAGGACACGTGGCGGTTCCGGAGGAGGTTGAAGAAGAGTTTGGGTTTATGAAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G29 GTGAAACGGGCCATGTTGGTTTGTCGGGTTGTAGCGGGTCGGGTCGGGTGTGATTTGATTGATGATGATGACGTGGATAAGAGTGATGGTGGAGGGTATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 GTGAAACGGGCCATGTTGGTTTGTCGGGTTGTAGCGGGTCGGGTCGGGTGTGATTTGATTGATGATGATGACGTGGATAAGAGTGATGGTGGAGGGTATG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT2G29 ATTCTCTGGTTGGGCAGAGTGGGAACAAGAGTGGGGCTCTGTTGAGGATCGACGATGATGAGCTTTTGGTTTTTAATCCAAGGGCTGTGCTTCCTTGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 ATTCTCTGGTTGGGCAGAGTGGGAACAAGAGTGGGGCTCTGTTGAGGATCGACGATGATGAGCTTTTGGTTTTTAATCCAAGGGCTGTGCTTCCTTGTTT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 AT2G29 TGTTATTGTGTATACTGTG ::::::::::::::::::: RE_040 TGTTATTGTGTATACTGTG 1110 10 20 30 40 50 60 70 80 90 100 AT2G29 MAARKLGSLLRQYFFSLCFLFLGCFFFPKDADYKQKRRKKKLRRVSSSSGSSLSSSWTYLKRVFLSTTRISKSRNQTHPNVTLTSARSSQNSLVTLVQPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 MAARKLGSLLRQYFFSLCFLFLGCFFFPKDADYKQKRRKKKLRRVSSSSGSSLSSSWTYLKRVFLSTTRISKSRNQTHPNVTLTSARSSQNSLVTLVQPD 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G29 TTNQPDPETRIHQQTEFEISSSDEIFPCNSCGEIFPKINLLENHIAIKHAVSELIAGESSTNIVKIIFKSGWPEQGNYKSPVINRILKIHNSSKILTRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 TTNQPDPETRIHQQTEFEISSSDEIFPCNSCGEIFPKINLLENHIAIKHAVSELIAGESSTNIVKIIFKSGWPEQGNYKSPVINRILKIHNSSKILTRFE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G29 EYREFVKAKAARSNGGGRRWDDERCVADGNELLRFYCSTFMCDLGQNGKSNLCGHQYCSICGIIGSGFSPKLDGIATLATGWRGHVAVPEEVEEEFGFMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 EYREFVKAKAARSNGGGRRWDDERCVADGNELLRFYCSTFMCDLGQNGKSNLCGHQYCSICGIIGSGFSPKLDGIATLATGWRGHVAVPEEVEEEFGFMN 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 AT2G29 VKRAMLVCRVVAGRVGCDLIDDDDVDKSDGGGYDSLVGQSGNKSGALLRIDDDELLVFNPRAVLPCFVIVYTV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_040 VKRAMLVCRVVAGRVGCDLIDDDDVDKSDGGGYDSLVGQSGNKSGALLRIDDDELLVFNPRAVLPCFVIVYTV 310 320 330 340 350 360 370

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