◆◆◆RE_0410 detail◆◆◆

Code name	RE_0410
Locus	AT3G45260
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.60%一致
comment	0420_アミノ酸配列70%以上一致
sequence	>RE_0410_1338bp ATGATGATGCCAGATGATCATCATCCCCTCTCATTTCCCAGCTATGTCCTTCACCAAGAACACATCGCTCCAAATCCTAACCCTAACCCTAATCCTACCT CCTCTAACTCAGCCAAGAGGAAGAGAAATCTCCCGGGAAATCCAGATCCAGATGCAGAAGTCATCGCTCTATCACCAAACTCCCTCATGACAACTAATCG ATTCATCTGCGAGGTTTGCAACAAAGGATTTAAGAGAGACCAGAACCTTCAGCTTCACCGGAGAGGCCATAACCTTCCATGGAAGCTAAAGCAAAGGACA AACAAGGAGCAAGTGAAGAAAAAAGTGTACATCTGTCCAGAGAAGACTTGCGTACACCATGACCCGGCCCGAGCCCTTGGTGACTTAACTGGAATTAAGA AGCATTTCAGCAGGAAACATGGTGAAAAGAAGTGGAAATGTGACAAGTGTTCCAAGAAATATGCTGTCATGTCCGATTGGAAAGCTCATAGCAAGATTTG TGGTACTAAAGAATACAGATGTGACTGTGGTACCCTCTTTTCCAGGAAAGATAGTTTCATCACACATAGAGCATTCTGTGACGCTTTAGCTGAAGAGAGT GCTAGATTTGTCTCAGTTCCACCAGCACCCGCATATTTGAACAATGCCCTGGATGTGGAAGTCAACCATGGAAATATCAACCAAAATCATCAACAACGAC CGCTTAATACTACTTCGTCACAATTGGACCAACCTGGTTTTAATACCAATCGCAATAACATTGCCTTTTTGGGACAAACCTTACCAACCAACGTTTTTGC GTCCTCATCATCTCCATCACCTCGTAGTGCATCCGACTCCCTTCAAAATCTATGGCATTTACAAGGACAATCATCTCACCAATGGCTTCTCAACGAAAAC AACAACAACAACAACAACATTCTCCAAAGGGGAATCTCCAAAAATCAAGAAGAACATGAGATGAAGAATGTGATTAGTAATGGTTCTTTGTTCTTTTCGG AAGCACGAAACAACACTAATAATTATAACCAAAACGGTGGACAAATAGCATCAATGTCAGCCACGGCATTGCTACAAAAGGCAGCTCAAATGGGATCAAA GAGATCATCATCAAGCTCAAGCAATAGCAAGACTTTTGGTCTAATGACCTCTATCTTCAACAACAAACAAGCAGAGAATATCAAAACTAAGGAAGTTGAT GAAAGAGGTTTCACGAGAGACTTTCTTGGTGTGGGAAGTCAACACCGTTCTTGGCCGTTATTGATGGTCAACCATAATCTTCCAGACTCGTCTCCTCCGG CCTCCACGGACGGCACACCAACCGCCGACATGAACCAG >RE_0410_translated MMMPDDHHPLSFPSYVLHQEHIAPNPNPNPNPTSSNSAKRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRT NKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEES ARFVSVPPAPAYLNNALDVEVNHGNINQNHQQRPLNTTSSQLDQPGFNTNRNNIAFLGQTLPTNVFASSSSPSPRSASDSLQNLWHLQGQSSHQWLLNEN NNNNNNILQRGISKNQEEHEMKNVISNGSLFFSEARNNTNNYNQNGGQIASMSATALLQKAAQMGSKRSSSSSSNSKTFGLMTSIFNNKQAENIKTKEVD ERGFTRDFLGVGSQHRSWPLLMVNHNLPDSSPPASTDGTPTADMNQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1336/1338 (99.9%)（アミノ酸配列で444/446 (99.6%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G45 ATGATGATGCCAGATGATCATCATCCCCTCTCATTTCCCAGCTATGTCCTTCACCAAGAACACATCGCTCCAAATCCTAACCCTAACCCTAATCCTACCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 ATGATGATGCCAGATGATCATCATCCCCTCTCATTTCCCAGCTATGTCCTTCACCAAGAACACATCGCTCCAAATCCTAACCCTAACCCTAATCCTACCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G45 CCTCTAACTCAGCCAAGAGGAAGAGAAATCTCCCGGGAAATCCAGATCCAGATGCAGAAGTCATCGCTCTATCACCAAACTCCCTCATGACAACTAATCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CCTCTAACTCAGCCAAGAGGAAGAGAAATCTCCCGGGAAATCCAGATCCAGATGCAGAAGTCATCGCTCTATCACCAAACTCCCTCATGACAACTAATCG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G45 ATTCATCTGCGAGGTTTGCAACAAAGGATTTAAGAGAGACCAGAACCTTCAGCTTCACCGGAGAGGCCATAACCTTCCATGGAAGCTAAAGCAAAGGACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 ATTCATCTGCGAGGTTTGCAACAAAGGATTTAAGAGAGACCAGAACCTTCAGCTTCACCGGAGAGGCCATAACCTTCCATGGAAGCTAAAGCAAAGGACA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G45 AACAAGGAGCAAGTGAAGAAAAAAGTGTACATCTGTCCAGAGAAGACTTGCGTACACCATGACCCGGCCCGAGCCCTTGGTGACTTAACTGGAATTAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 AACAAGGAGCAAGTGAAGAAAAAAGTGTACATCTGTCCAGAGAAGACTTGCGTACACCATGACCCGGCCCGAGCCCTTGGTGACTTAACTGGAATTAAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G45 AGCATTTCAGCAGGAAACATGGTGAAAAGAAGTGGAAATGTGACAAGTGTTCCAAGAAATATGCTGTCATGTCCGATTGGAAAGCTCATAGCAAGATTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 AGCATTTCAGCAGGAAACATGGTGAAAAGAAGTGGAAATGTGACAAGTGTTCCAAGAAATATGCTGTCATGTCCGATTGGAAAGCTCATAGCAAGATTTG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G45 TGGTACTAAAGAATACAGATGTGACTGTGGTACCCTCTTTTCCAGGAAAGATAGTTTCATCACACATAGAGCATTCTGTGACGCTTTAGCTGAAGAGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 TGGTACTAAAGAATACAGATGTGACTGTGGTACCCTCTTTTCCAGGAAAGATAGTTTCATCACACATAGAGCATTCTGTGACGCTTTAGCTGAAGAGAGT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G45 GCTAGATTTGTCTCAGTTCCACCAGCACCCGCATATTTGAACAATGCCCTGGATGTGGAAGTCAACCATGGAAATATCAACCAAAATCATCAACAACGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GCTAGATTTGTCTCAGTTCCACCAGCACCCGCATATTTGAACAATGCCCTGGATGTGGAAGTCAACCATGGAAATATCAACCAAAATCATCAACAACGAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G45 AGCTTAATACTACTTCGTCACAATTGGACCAACCTGGTTTTAATACCAATCGCAATAACATTGCCTTTTTGGGACAAACCTTACCAACCAACGTTTTTGC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CGCTTAATACTACTTCGTCACAATTGGACCAACCTGGTTTTAATACCAATCGCAATAACATTGCCTTTTTGGGACAAACCTTACCAACCAACGTTTTTGC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G45 GTCCTCATCATCTCCATCACCTCGTAGTGCATCCGACTCCCTTCAAAATCTATGGCATTTACAAGGACAATCATCTCACCAATGGCTTCTCAACGAAAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GTCCTCATCATCTCCATCACCTCGTAGTGCATCCGACTCCCTTCAAAATCTATGGCATTTACAAGGACAATCATCTCACCAATGGCTTCTCAACGAAAAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G45 AACAACAACAACAACAACATTCTCCAAAGGGGAATCTCCAAAAATCAAGAAGAACATGAGATGAAGAATGTGATTAGTAATGGTTCTTTGTTCTCTTCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: RE_041 AACAACAACAACAACAACATTCTCCAAAGGGGAATCTCCAAAAATCAAGAAGAACATGAGATGAAGAATGTGATTAGTAATGGTTCTTTGTTCTTTTCGG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G45 AAGCACGAAACAACACTAATAATTATAACCAAAACGGTGGACAAATAGCATCAATGTCAGCCACGGCATTGCTACAAAAGGCAGCTCAAATGGGATCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 AAGCACGAAACAACACTAATAATTATAACCAAAACGGTGGACAAATAGCATCAATGTCAGCCACGGCATTGCTACAAAAGGCAGCTCAAATGGGATCAAA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT3G45 GAGATCATCATCAAGCTCAAGCAATAGCAAGACTTTTGGTCTAATGACCTCTATCTTCAACAACAAACAAGCAGAGAATATCAAAACTAAGGAAGTTGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GAGATCATCATCAAGCTCAAGCAATAGCAAGACTTTTGGTCTAATGACCTCTATCTTCAACAACAAACAAGCAGAGAATATCAAAACTAAGGAAGTTGAT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT3G45 GAAAGAGGTTTCACGAGAGACTTTCTTGGTGTGGGAAGTCAACACCGTTCTTGGCCGTTATTGATGGTCAACCATAATCTTCCAGACTCGTCTCCTCCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GAAAGAGGTTTCACGAGAGACTTTCTTGGTGTGGGAAGTCAACACCGTTCTTGGCCGTTATTGATGGTCAACCATAATCTTCCAGACTCGTCTCCTCCGG 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 AT3G45 CCTCCACGGACGGCACACCAACCGCCGACATGAACCAG :::::::::::::::::::::::::::::::::::::: RE_041 CCTCCACGGACGGCACACCAACCGCCGACATGAACCAG 1310 1320 1330 10 20 30 40 50 60 70 80 90 100 AT3G45 MMMPDDHHPLSFPSYVLHQEHIAPNPNPNPNPTSSNSAKRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 MMMPDDHHPLSFPSYVLHQEHIAPNPNPNPNPTSSNSAKRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G45 NKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 NKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEES 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G45 ARFVSVPPAPAYLNNALDVEVNHGNINQNHQQRQLNTTSSQLDQPGFNTNRNNIAFLGQTLPTNVFASSSSPSPRSASDSLQNLWHLQGQSSHQWLLNEN ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 ARFVSVPPAPAYLNNALDVEVNHGNINQNHQQRPLNTTSSQLDQPGFNTNRNNIAFLGQTLPTNVFASSSSPSPRSASDSLQNLWHLQGQSSHQWLLNEN 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G45 NNNNNNILQRGISKNQEEHEMKNVISNGSLFSSEARNNTNNYNQNGGQIASMSATALLQKAAQMGSKRSSSSSSNSKTFGLMTSIFNNKQAENIKTKEVD ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 NNNNNNILQRGISKNQEEHEMKNVISNGSLFFSEARNNTNNYNQNGGQIASMSATALLQKAAQMGSKRSSSSSSNSKTFGLMTSIFNNKQAENIKTKEVD 310 320 330 340 350 360 370 380 390 400 410 420 430 440 AT3G45 ERGFTRDFLGVGSQHRSWPLLMVNHNLPDSSPPASTDGTPTADMNQ :::::::::::::::::::::::::::::::::::::::::::::: RE_041 ERGFTRDFLGVGSQHRSWPLLMVNHNLPDSSPPASTDGTPTADMNQ 410 420 430 440

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