◆◆◆RE_0412 detail◆◆◆

Code name	RE_0412
Locus	AT3G57670
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0311_アミノ酸配列100%一致
sequence	>RE_0412_1149bp ATGACTGATCCTTATTCCAATTTCTTCACAGACTGGTTCAAGTCTAATCCTTTTCACCATTACCCTAATTCCTCCACTAACCCCTCTCCTCACCCTCTTC CTCCTGTTACTCCTCCCTCTTCCTTCTTCTTCTTCCCTCAATCCGGAGACCTCCGCCGTCCACCGCCGCCACCAACTCCTCCTCCTTCTCCTCCTCTCCG AGAAGCCCTCCCTCTCCTCAGCCTCAGCCCCGCCAACAAACAACAAGACCACCATCACAACCATGACCACCTTATTCAAGAACCACCTTCAACCTCCATG GATGTCGACTACGATCATCACCATCAAGATGATCATCATAACCTCGATGACGATGACCATGACGTCACCGTTGCTCTTCACATAGGCCTTCCAAGCCCTA GTGCTCAAGAGATGGCCTCTTTGCTCATGATGTCTTCTTCTTCCTCTTCCTCGAGGACCACTCATCATCACGAGGACATGAATCACAAGAAAGACCTCGA CCATGAGTACAGCCACGGAGCTGTCGGAGGAGGAGAAGATGACGATGAAGATTCAGTCGGCGGAGACGGCGGCTGTAGAATCAGCAGACTCAACAAGGGT CAATATTGGATCCCTACACCTTCTCAGATTCTCATTGGCCCTACTCAGTTCTCATGTCCTGTTTGCTTCAAAACCTTCAACAGATACAATAACATGCAGA TGCATATGTGGGGACATGGATCACAATACAGAAAAGGACCTGAATCCCTAAGGGGAACACAACCAACAGGAATGCTAAGGCTTCCGTGCTATTGCTGCGC CCCAGGCTGTCGCAACAACATTGACCATCCAAGGGCAAAGCCTCTCAAAGACTTCAGAACCCTTCAAACACATTACAAGAGAAAACATGGGATCAAACCT TTCATGTGTAGGAAATGTGGAAAGGCTTTCGCAGTCCGAGGGGACTGGAGAACACATGAGAAGAATTGTGGCAAACTTTGGTATTGCATATGTGGATCTG ATTTCAAGCACAAGAGATCTCTCAAAGATCACATCAAGGCTTTTGGGAATGGTCATGGAGCCTACGGAATTGATGGGTTTGATGAAGAAGATGAGCCTGC CTCTGAGGTAGAACAATTAGACAATGATCATGAGTCAATGCAGTCTAAA >RE_0412_translated MTDPYSNFFTDWFKSNPFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPPPTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSM DVDYDHHHQDDHHNLDDDDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGGGEDDDEDSVGGDGGCRISRLNKG QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP FMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHESMQSK
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1147/1149 (99.8%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G57 ATGACTGATCCTTATTCCAATTTCTTCACAGACTGGTTCAAGTCTAATCCTTTTCACCATTACCCTAATTCCTCCACTAACCCCTCTCCTCATCCTCTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: RE_041 ATGACTGATCCTTATTCCAATTTCTTCACAGACTGGTTCAAGTCTAATCCTTTTCACCATTACCCTAATTCCTCCACTAACCCCTCTCCTCACCCTCTTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G57 CTCCTGTTACTCCTCCCTCTTCCTTCTTCTTCTTCCCTCAATCCGGAGACCTCCGCCGTCCACCGCCGCCACCAACTCCTCCTCCTTCTCCTCCTCTCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CTCCTGTTACTCCTCCCTCTTCCTTCTTCTTCTTCCCTCAATCCGGAGACCTCCGCCGTCCACCGCCGCCACCAACTCCTCCTCCTTCTCCTCCTCTCCG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G57 AGAAGCCCTCCCTCTCCTCAGCCTCAGCCCCGCCAACAAACAACAAGACCACCATCACAACCATGACCACCTTATTCAAGAACCACCTTCAACCTCCATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 AGAAGCCCTCCCTCTCCTCAGCCTCAGCCCCGCCAACAAACAACAAGACCACCATCACAACCATGACCACCTTATTCAAGAACCACCTTCAACCTCCATG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G57 GATGTCGACTACGATCATCACCATCAAGATGATCATCATAACCTCGATGACGATGACCATGACGTCACCGTTGCTCTTCACATAGGCCTTCCAAGCCCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GATGTCGACTACGATCATCACCATCAAGATGATCATCATAACCTCGATGACGATGACCATGACGTCACCGTTGCTCTTCACATAGGCCTTCCAAGCCCTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G57 GTGCTCAAGAGATGGCCTCTTTGCTCATGATGTCTTCTTCTTCCTCTTCCTCGAGGACCACTCATCATCACGAGGACATGAATCACAAGAAAGACCTCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GTGCTCAAGAGATGGCCTCTTTGCTCATGATGTCTTCTTCTTCCTCTTCCTCGAGGACCACTCATCATCACGAGGACATGAATCACAAGAAAGACCTCGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G57 CCATGAGTACAGCCACGGAGCTGTCGGAGGAGGAGAAGATGACGATGAAGATTCAGTCGGCGGAGACGGCGGCTGTAGAATCAGCAGACTCAACAAGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CCATGAGTACAGCCACGGAGCTGTCGGAGGAGGAGAAGATGACGATGAAGATTCAGTCGGCGGAGACGGCGGCTGTAGAATCAGCAGACTCAACAAGGGT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G57 CAATATTGGATCCCTACACCTTCTCAGATTCTCATTGGCCCTACTCAGTTCTCATGTCCTGTTTGCTTCAAAACCTTCAACAGATACAATAACATGCAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CAATATTGGATCCCTACACCTTCTCAGATTCTCATTGGCCCTACTCAGTTCTCATGTCCTGTTTGCTTCAAAACCTTCAACAGATACAATAACATGCAGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G57 TGCATATGTGGGGACATGGATCACAATACAGAAAAGGACCTGAATCTCTAAGGGGAACACAACCAACAGGAATGCTAAGGCTTCCGTGCTATTGCTGCGC :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 TGCATATGTGGGGACATGGATCACAATACAGAAAAGGACCTGAATCCCTAAGGGGAACACAACCAACAGGAATGCTAAGGCTTCCGTGCTATTGCTGCGC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G57 CCCAGGCTGTCGCAACAACATTGACCATCCAAGGGCAAAGCCTCTCAAAGACTTCAGAACCCTTCAAACACATTACAAGAGAAAACATGGGATCAAACCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CCCAGGCTGTCGCAACAACATTGACCATCCAAGGGCAAAGCCTCTCAAAGACTTCAGAACCCTTCAAACACATTACAAGAGAAAACATGGGATCAAACCT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G57 TTCATGTGTAGGAAATGTGGAAAGGCTTTCGCAGTCCGAGGGGACTGGAGAACACATGAGAAGAATTGTGGCAAACTTTGGTATTGCATATGTGGATCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 TTCATGTGTAGGAAATGTGGAAAGGCTTTCGCAGTCCGAGGGGACTGGAGAACACATGAGAAGAATTGTGGCAAACTTTGGTATTGCATATGTGGATCTG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G57 ATTTCAAGCACAAGAGATCTCTCAAAGATCACATCAAGGCTTTTGGGAATGGTCATGGAGCCTACGGAATTGATGGGTTTGATGAAGAAGATGAGCCTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 ATTTCAAGCACAAGAGATCTCTCAAAGATCACATCAAGGCTTTTGGGAATGGTCATGGAGCCTACGGAATTGATGGGTTTGATGAAGAAGATGAGCCTGC 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 AT3G57 CTCTGAGGTAGAACAATTAGACAATGATCATGAGTCAATGCAGTCTAAA ::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CTCTGAGGTAGAACAATTAGACAATGATCATGAGTCAATGCAGTCTAAA 1110 1120 1130 1140 10 20 30 40 50 60 70 80 90 100 AT3G57 MTDPYSNFFTDWFKSNPFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPPPTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 MTDPYSNFFTDWFKSNPFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPPPTPPPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSM 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G57 DVDYDHHHQDDHHNLDDDDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGGGEDDDEDSVGGDGGCRISRLNKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 DVDYDHHHQDDHHNLDDDDHDVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGGGEDDDEDSVGGDGGCRISRLNKG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G57 QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 AT3G57 FMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHESMQSK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 FMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVEQLDNDHESMQSK 310 320 330 340 350 360 370 380

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