◆◆◆RE_0416 detail◆◆◆

Code name	RE_0416
Locus	AT4G12240
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0311_アミノ酸配列100%一致
sequence	>RE_0416_1092bp ATGTTTTCAAGATTTGTCCTAAAAAGTTGGAGACCTAAAACCCAAACCACATCTCTCAATTCAATCAAAGGTTTTAGCTTTAGCTCTAGCTCGATAAACC CTAAACCCAAAATCCGAGTAGGGGTTTGGTGGGATCTAGACAACAAACCACCAGCCTCTTTCCCGCCTTACGACGCCGCCGTCAAGCTCCGAACCGCCGC GTCGTCTTTCGGAACCGTGAAGCTAATGATGGCGTATGCGAATCGTCACGCCTTTAGCTACGTTCCTTTAGAAGTTCGAGAACAGAGGAAAGATAGGAAA TTGCTAAACAAATTAGAGAACAAAGGTTTAGTTAAACCACCGGAGCCTTACTTCTGCGGTGTTTGTGACCGGAGATTCTACACTAACGAGAAGCTAATTA ATCATTTCAAGCAGATTCATGAGACAGAGAATCAGAAACGTATGAGACAGATTGAATCTTCGAAAGGACATCGAAGAGTGAGACTTGTGGCTAAGTATTC GATGAAGATTGAGAAGTATAAAAGAGCGGCGAGGAATGTTTTGACTCCGAAGGAAGGTTACGGTCTAGCTGATGAGCTGAAACGAGCTGGTTTTTGGGTG AAGATGGTTAGTGATAAGCCAGATGCTGCTGATAAGGCGTTGAAGGAACATTTGGTTGAAGTGATGGATAAGAGAGAAGTGGAGTGTGTTGTTTTAGTGT CTGATGATTCTGATTTTGCGGGGATTTTGTGGGAAGCTAAGGAGAGGTGTTTGAGGACGGTTGTGATTGGAGATTCGAACGAAGGTGCGCTGAAGCGAGT AGCGGATGTTGCGTATTCGTGGAAGGAAGTGACGATGGGGAAGGCGAAGAAGGAAGTTGAGAAAGTTGTGGGGAAGTGGAAGGATAGAGATGTGTTGAAG AAGTTGGAGTGGACTTATGATCCTGCTTTGGAGAAAGAGAGAGGTGGTTCTTGCGGTGTTTGGGATTACGAGTTTGATTATGATGATGAGATTGAGAATG GAACAGAGGTGGAACCTGTGGAGATTGGTGATGGTGTTGACTGGTGGAAGATCGATACTGAAGATGGTGTTGGATCTTCAAGAACTTGTCGA >RE_0416_translated MFSRFVLKSWRPKTQTTSLNSIKGFSFSSSSINPKPKIRVGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDRK LLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWV KMVSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLK KLEWTYDPALEKERGGSCGVWDYEFDYDDEIENGTEVEPVEIGDGVDWWKIDTEDGVGSSRTCR
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1091/1092 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G12 ATGTTTTCAAGATTTGTCCTAAAAAGTTGGAGACCTAAAACCCAAACCACATCTCTCAATTCAATCAAAGGTTTTAGCTTTAGCTCTAGCTCGATAAACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 ATGTTTTCAAGATTTGTCCTAAAAAGTTGGAGACCTAAAACCCAAACCACATCTCTCAATTCAATCAAAGGTTTTAGCTTTAGCTCTAGCTCGATAAACC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G12 CTAAACCCAAAATCCGAGTAGGGGTTTGGTGGGATCTAGACAACAAACCACCAGCCTCTTTCCCGCCTTACGACGCCGCCGTCAAGCTCCGAACCGCCGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CTAAACCCAAAATCCGAGTAGGGGTTTGGTGGGATCTAGACAACAAACCACCAGCCTCTTTCCCGCCTTACGACGCCGCCGTCAAGCTCCGAACCGCCGC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G12 GTCGTCTTTCGGAACCGTGAAGCTAATGATGGCGTATGCGAATCGTCACGCCTTTAGCTACGTTCCTTTAGAAGTTCGAGAACAGAGGAAAGATAGGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GTCGTCTTTCGGAACCGTGAAGCTAATGATGGCGTATGCGAATCGTCACGCCTTTAGCTACGTTCCTTTAGAAGTTCGAGAACAGAGGAAAGATAGGAAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G12 TTGCTAAACAAATTAGAGAACAAAGGTTTAGTTAAACCACCGGAGCCTTACTTCTGCGGTGTTTGTGACCGGAGATTCTACACTAACGAGAAGCTAATTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 TTGCTAAACAAATTAGAGAACAAAGGTTTAGTTAAACCACCGGAGCCTTACTTCTGCGGTGTTTGTGACCGGAGATTCTACACTAACGAGAAGCTAATTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G12 ATCATTTCAAGCAGATTCATGAGACAGAGAATCAGAAACGTATGAGACAGATTGAATCTTCGAAAGGACATCGAAGAGTGAGACTTGTGGCTAAGTATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 ATCATTTCAAGCAGATTCATGAGACAGAGAATCAGAAACGTATGAGACAGATTGAATCTTCGAAAGGACATCGAAGAGTGAGACTTGTGGCTAAGTATTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G12 GATGAAGATTGAGAAGTATAAAAGAGCGGCGAGGAATGTTTTGACTCCGAAGGAAGGTTACGGTTTAGCTGATGAGCTGAAACGAGCTGGTTTTTGGGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: RE_041 GATGAAGATTGAGAAGTATAAAAGAGCGGCGAGGAATGTTTTGACTCCGAAGGAAGGTTACGGTCTAGCTGATGAGCTGAAACGAGCTGGTTTTTGGGTG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G12 AAGATGGTTAGTGATAAGCCAGATGCTGCTGATAAGGCGTTGAAGGAACATTTGGTTGAAGTGATGGATAAGAGAGAAGTGGAGTGTGTTGTTTTAGTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 AAGATGGTTAGTGATAAGCCAGATGCTGCTGATAAGGCGTTGAAGGAACATTTGGTTGAAGTGATGGATAAGAGAGAAGTGGAGTGTGTTGTTTTAGTGT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G12 CTGATGATTCTGATTTTGCGGGGATTTTGTGGGAAGCTAAGGAGAGGTGTTTGAGGACGGTTGTGATTGGAGATTCGAACGAAGGTGCGCTGAAGCGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 CTGATGATTCTGATTTTGCGGGGATTTTGTGGGAAGCTAAGGAGAGGTGTTTGAGGACGGTTGTGATTGGAGATTCGAACGAAGGTGCGCTGAAGCGAGT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G12 AGCGGATGTTGCGTATTCGTGGAAGGAAGTGACGATGGGGAAGGCGAAGAAGGAAGTTGAGAAAGTTGTGGGGAAGTGGAAGGATAGAGATGTGTTGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 AGCGGATGTTGCGTATTCGTGGAAGGAAGTGACGATGGGGAAGGCGAAGAAGGAAGTTGAGAAAGTTGTGGGGAAGTGGAAGGATAGAGATGTGTTGAAG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT4G12 AAGTTGGAGTGGACTTATGATCCTGCTTTGGAGAAAGAGAGAGGTGGTTCTTGCGGTGTTTGGGATTACGAGTTTGATTATGATGATGAGATTGAGAATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 AAGTTGGAGTGGACTTATGATCCTGCTTTGGAGAAAGAGAGAGGTGGTTCTTGCGGTGTTTGGGATTACGAGTTTGATTATGATGATGAGATTGAGAATG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 AT4G12 GAACAGAGGTGGAACCTGTGGAGATTGGTGATGGTGTTGACTGGTGGAAGATCGATACTGAAGATGGTGTTGGATCTTCAAGAACTTGTCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 GAACAGAGGTGGAACCTGTGGAGATTGGTGATGGTGTTGACTGGTGGAAGATCGATACTGAAGATGGTGTTGGATCTTCAAGAACTTGTCGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 10 20 30 40 50 60 70 80 90 100 AT4G12 MFSRFVLKSWRPKTQTTSLNSIKGFSFSSSSINPKPKIRVGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 MFSRFVLKSWRPKTQTTSLNSIKGFSFSSSSINPKPKIRVGVWWDLDNKPPASFPPYDAAVKLRTAASSFGTVKLMMAYANRHAFSYVPLEVREQRKDRK 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G12 LLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 LLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRRVRLVAKYSMKIEKYKRAARNVLTPKEGYGLADELKRAGFWV 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G12 KMVSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 KMVSDKPDAADKALKEHLVEVMDKREVECVVLVSDDSDFAGILWEAKERCLRTVVIGDSNEGALKRVADVAYSWKEVTMGKAKKEVEKVVGKWKDRDVLK 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 AT4G12 KLEWTYDPALEKERGGSCGVWDYEFDYDDEIENGTEVEPVEIGDGVDWWKIDTEDGVGSSRTCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_041 KLEWTYDPALEKERGGSCGVWDYEFDYDDEIENGTEVEPVEIGDGVDWWKIDTEDGVGSSRTCR 310 320 330 340 350 360

このページのTOPに戻る