◆◆◆RE_0454 detail◆◆◆

Code name	RE_0454
Locus	AT3G19360
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0311_アミノ酸配列70%以上一致
sequence	>RE_0454_1158bp ATGGATTCGAGTTACTCTGATTCTCGTCCCATGTTCGTGCAATCACCTTATGGTGGTTGGAATCAAACACAGATGATTGATTCAATGGCTAATCCAATGA ACAATGAACAAGGAGACTTGCATTCACTATCTGAATCACAATCACAATCTCAACCGTCTCAGCAATTACAGCCTGCATTGAAAAGGCCTAGACTTGTTGA TGATAACTTGTTTAATCCTGCTTCGTCGTTTCCTCAGCCTTCGAGTAGCAATCCTTGGATGGTTCCATCTTTGAACCCTCCTCCTGTGAACAAAGGGACT GCTAATATATTCTATAAGACTAGAATGTGTGCTAAATTCAGGGCAGGGACTTGTAGGAATGGTGAACTCTGTAATTTTGCTCATGGGATTGAGGATTTGA GGCAGCCTCCGTCGAATTGGCAGGAAATTGTTGGACCTCCTCCTGCTGGTCAAGACAGGGAGAGGGAGAGAGAGAGGGAAAGGGAGAGGGAAAGACCGTC TTTGGCGCCTGTTGTGAATAATAATTTGGAAGATGATCAGAAGATAATCTTGAGGATGAAGCTTTGTAGGAAGTTTTGTTTTGGGGAAGAGTGTCCTTAT GGGGACAGGTGCAATTTTATTCATGAGGATCTGTCAAAGTTTCGTGAGGACTCGGGGAAGTTGAGAGAGAGCTCGGTTATAAGTGTTGGTGCTACTGCTG CTGATCAACCATCTGATACTGCTTCTAATCTTATTGAAGTAAATAGACAAGGAAGCATCCCGGTACCTGCACCTATGAACAATGGTGGTGTTGTCAAGAC TGTGTACTGGAAGACGAGGTTGTGCATGAAGTTTGACATCACGGGTCAATGTCCTTTTGGCGATAAGTGTCACTTTGCTCATGGCCAAGCAGAGTTGCAT AACTCTGTTGGAAGGGTAGAAGGAGAAGCTATGAACGCGGTAGCGTCTGTGAATAAACAAGCAGTGGTACCTGCGAATGAAGCATTTGCAATGAAACCGA TTACACAAGTAACAGCAGATTCCTCTGGTCTGAATGAAGAAGGGCGGCGAAAGAAGTGTTTGCTCAAGTGGAGCGACTCCAAGAAGATTAACCGAATATA TGGAGACTGGATCGATGATTTACCGGTGGGTCAAAAGTCGACAAAGCCAGTAGAGAGT >RE_0454_translated MDSSYSDSRPMFVQSPYGGWNQTQMIDSMANPMNNEQGDLHSLSESQSQSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPPPVNKGT ANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERPSLAPVVNNNLEDDQKIILRMKLCRKFCFGEECPY GDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELH NSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVES
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1157/1158 (99.9%)（アミノ酸配列で385/386 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G19 ATGGATTCGAGTTACTCTGATTCTCGTCCCATGTTCGTGCAATCACCTTATGGTGGTTGGAATCAAACACAGATGATTGATTCAATGGCTAATCCAATGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 ATGGATTCGAGTTACTCTGATTCTCGTCCCATGTTCGTGCAATCACCTTATGGTGGTTGGAATCAAACACAGATGATTGATTCAATGGCTAATCCAATGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G19 ACAATGAACAAGGAGACTTGCATTCACTATCTGAATCACAATCACAATCTCAACCGTCTCAGCAATTACAGCCTGCATTGAAAAGGCCTAGACTTGTTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 ACAATGAACAAGGAGACTTGCATTCACTATCTGAATCACAATCACAATCTCAACCGTCTCAGCAATTACAGCCTGCATTGAAAAGGCCTAGACTTGTTGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G19 TGATAACTTGTTTAATCCTGCTTCGTCGTTTCCTCAGCCTTCGAGTAGCAATCCTTGGATGGTTCCATCTTTGAACCCTCCTCCTGTGAACAAAGGGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 TGATAACTTGTTTAATCCTGCTTCGTCGTTTCCTCAGCCTTCGAGTAGCAATCCTTGGATGGTTCCATCTTTGAACCCTCCTCCTGTGAACAAAGGGACT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G19 GCTAATATATTCTATAAGACTAGAATGTGTGCTAAATTCAGGGCAGGGACTTGTAGGAATGGTGAACTCTGTAATTTTGCTCATGGGATTGAGGATTTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 GCTAATATATTCTATAAGACTAGAATGTGTGCTAAATTCAGGGCAGGGACTTGTAGGAATGGTGAACTCTGTAATTTTGCTCATGGGATTGAGGATTTGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G19 GGCAGCCTCCGTCGAATTGGCAGGAAATTGTTGGACCTCCTCCTGCTGGTCAAGACAGGGAGAGGGAGAGAGAGAGGGAAAGGGAGAGGGAAAGACCGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 GGCAGCCTCCGTCGAATTGGCAGGAAATTGTTGGACCTCCTCCTGCTGGTCAAGACAGGGAGAGGGAGAGAGAGAGGGAAAGGGAGAGGGAAAGACCGTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G19 TTTGGCGCCTGTTGTGAATAATAATTGGGAAGATGATCAGAAGATAATCTTGAGGATGAAGCTTTGTAGGAAGTTTTGTTTTGGGGAAGAGTGTCCTTAT :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 TTTGGCGCCTGTTGTGAATAATAATTTGGAAGATGATCAGAAGATAATCTTGAGGATGAAGCTTTGTAGGAAGTTTTGTTTTGGGGAAGAGTGTCCTTAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G19 GGGGACAGGTGCAATTTTATTCATGAGGATCTGTCAAAGTTTCGTGAGGACTCGGGGAAGTTGAGAGAGAGCTCGGTTATAAGTGTTGGTGCTACTGCTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 GGGGACAGGTGCAATTTTATTCATGAGGATCTGTCAAAGTTTCGTGAGGACTCGGGGAAGTTGAGAGAGAGCTCGGTTATAAGTGTTGGTGCTACTGCTG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G19 CTGATCAACCATCTGATACTGCTTCTAATCTTATTGAAGTAAATAGACAAGGAAGCATCCCGGTACCTGCACCTATGAACAATGGTGGTGTTGTCAAGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 CTGATCAACCATCTGATACTGCTTCTAATCTTATTGAAGTAAATAGACAAGGAAGCATCCCGGTACCTGCACCTATGAACAATGGTGGTGTTGTCAAGAC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G19 TGTGTACTGGAAGACGAGGTTGTGCATGAAGTTTGACATCACGGGTCAATGTCCTTTTGGCGATAAGTGTCACTTTGCTCATGGCCAAGCAGAGTTGCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 TGTGTACTGGAAGACGAGGTTGTGCATGAAGTTTGACATCACGGGTCAATGTCCTTTTGGCGATAAGTGTCACTTTGCTCATGGCCAAGCAGAGTTGCAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G19 AACTCTGTTGGAAGGGTAGAAGGAGAAGCTATGAACGCGGTAGCGTCTGTGAATAAACAAGCAGTGGTACCTGCGAATGAAGCATTTGCAATGAAACCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 AACTCTGTTGGAAGGGTAGAAGGAGAAGCTATGAACGCGGTAGCGTCTGTGAATAAACAAGCAGTGGTACCTGCGAATGAAGCATTTGCAATGAAACCGA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G19 TTACACAAGTAACAGCAGATTCCTCTGGTCTGAATGAAGAAGGGCGGCGAAAGAAGTGTTTGCTCAAGTGGAGCGACTCCAAGAAGATTAACCGAATATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 TTACACAAGTAACAGCAGATTCCTCTGGTCTGAATGAAGAAGGGCGGCGAAAGAAGTGTTTGCTCAAGTGGAGCGACTCCAAGAAGATTAACCGAATATA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 AT3G19 TGGAGACTGGATCGATGATTTACCGGTGGGTCAAAAGTCGACAAAGCCAGTAGAGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 TGGAGACTGGATCGATGATTTACCGGTGGGTCAAAAGTCGACAAAGCCAGTAGAGAGT 1110 1120 1130 1140 1150 10 20 30 40 50 60 70 80 90 100 AT3G19 MDSSYSDSRPMFVQSPYGGWNQTQMIDSMANPMNNEQGDLHSLSESQSQSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPPPVNKGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 MDSSYSDSRPMFVQSPYGGWNQTQMIDSMANPMNNEQGDLHSLSESQSQSQPSQQLQPALKRPRLVDDNLFNPASSFPQPSSSNPWMVPSLNPPPVNKGT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G19 ANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: RE_045 ANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERERERERERERPSLAPVVNNNLEDDQKIILRMKLCRKFCFGEECPY 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G19 GDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 GDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELH 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 AT3G19 NSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_045 NSVGRVEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDDLPVGQKSTKPVES 310 320 330 340 350 360 370 380

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