◆◆◆RE_0460 detail◆◆◆

Code name	RE_0460
Locus	AT5G44260
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0318_アミノ酸配列70%以上一致
sequence	>RE_0460_1143bp ATGGACGTCGAACATCACAAATCCGGCCACATCAGTAGACCAACGGTGGATATTCCACCGAGGAAGCTTCTTTCCTCCGCCAAGCCTCCGTCGTCAGTTT CAAGTCCCCTTCGCGACTATAAAGAACAGAAAGACTATTGTTACGACTCTGACTCTGAGGATCCTTACGCTGGAGACCATTTCCGGATGTACGAATTCAA GATCCGACGGTGCACGCGTAGCCGTAGCCATGACTGGACCGACTGTCCTTTCTCTCATCCCGGTGAAAAGGCTCGTCGCCGTGACCCTCGCCGGTTTCAC TACACCGGAGAAGTATGCCCTGAGTTTAGCCGTCACGGTGATTGTAGCCGTGGTGATGAATGCGGTTTCGCTCACGGGGTTTTCGAGTGTTGGCTTCATC CGAGTCGTTACCGTACGGAAGCTTGTAAAGACGGTAAGCATTGTAAGAGGAAAGTTTGTTTCTTTGCTCATTCTCCACGTCAGCTGAGAGTTCTTCCACC GTCCCCGGAGAATCATATTTCCGGTGGTTGCGGTGGATCACCGTCGTCATCCCCTGCATCGGTTTTAAGCAATAAAAATAATCGATGTTGCTTGTTTTGT TCCCATTCTCCGACGAGTACTCTCTTGAATTTATCACGATCACCTTCATCGTCTCCGCCTTTGTCTCCAGCTGATAAAGCCGATGCATTTTCACGGCTGA GCCGCCGTCGCACCGCCGTACTAAACGAACTGATTAGTTCTTTAGATTCCTTAAGTCTCACGGAAGCACTTGCAGCTTCTTCATCGTCTCCCGTTACCAT GCCCATTTCCACGGCGACGATGATCGCTTCATCGAATCTAAGCAGCAACCACCACCACCACCGTCTTCCGCCGTGGCTTGATGTCGGAGACAGAGATCTC CAATTACAACAGAGTAGTCCTCTACGATTTGCTCTTTCACCTTCTTCAACTCCAAGTTACCTCCATGGCCAGCTTCAGCCACCACCGTCGAGCTTCTTTG GCGATGAATTCACACCACGTGGTGGCCGGCTAAGCGATTTCTCGGTGGCTGCAGCTGCGGCGGCCCAAGCTAGGGATAAAAATAGCTTTGAAGTCGGTTC TAGTGGCGATCTTGATCTAGGATGGGTGAACGATCTTTTGACA >RE_0460_translated MDVEHHKSGHISRPTVDIPPRKLLSSAKPPSSVSSPLRDYKEQKDYCYDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFH YTGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHISGGCGGSPSSSPASVLSNKNNRCCLFC SHSPTSTLLNLSRSPSSSPPLSPADKADAFSRLSRRRTAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNLSSNHHHHRLPPWLDVGDRDL QLQQSSPLRFALSPSSTPSYLHGQLQPPPSSFFGDEFTPRGGRLSDFSVAAAAAAQARDKNSFEVGSSGDLDLGWVNDLLT
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1142/1143 (99.9%)（アミノ酸配列で380/381 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G44 ATGGACGTCGAACATCACAAATCCGGCCACATCAGTAGACCAACGGTGGATATTCCACCGAGGAAGCTTCTTTCCTCCGCCAAGTCTCCGTCGTCAGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: RE_046 ATGGACGTCGAACATCACAAATCCGGCCACATCAGTAGACCAACGGTGGATATTCCACCGAGGAAGCTTCTTTCCTCCGCCAAGCCTCCGTCGTCAGTTT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G44 CAAGTCCCCTTCGCGACTATAAAGAACAGAAAGACTATTGTTACGACTCTGACTCTGAGGATCCTTACGCTGGAGACCATTTCCGGATGTACGAATTCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 CAAGTCCCCTTCGCGACTATAAAGAACAGAAAGACTATTGTTACGACTCTGACTCTGAGGATCCTTACGCTGGAGACCATTTCCGGATGTACGAATTCAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G44 GATCCGACGGTGCACGCGTAGCCGTAGCCATGACTGGACCGACTGTCCTTTCTCTCATCCCGGTGAAAAGGCTCGTCGCCGTGACCCTCGCCGGTTTCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 GATCCGACGGTGCACGCGTAGCCGTAGCCATGACTGGACCGACTGTCCTTTCTCTCATCCCGGTGAAAAGGCTCGTCGCCGTGACCCTCGCCGGTTTCAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G44 TACACCGGAGAAGTATGCCCTGAGTTTAGCCGTCACGGTGATTGTAGCCGTGGTGATGAATGCGGTTTCGCTCACGGGGTTTTCGAGTGTTGGCTTCATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 TACACCGGAGAAGTATGCCCTGAGTTTAGCCGTCACGGTGATTGTAGCCGTGGTGATGAATGCGGTTTCGCTCACGGGGTTTTCGAGTGTTGGCTTCATC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G44 CGAGTCGTTACCGTACGGAAGCTTGTAAAGACGGTAAGCATTGTAAGAGGAAAGTTTGTTTCTTTGCTCATTCTCCACGTCAGCTGAGAGTTCTTCCACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 CGAGTCGTTACCGTACGGAAGCTTGTAAAGACGGTAAGCATTGTAAGAGGAAAGTTTGTTTCTTTGCTCATTCTCCACGTCAGCTGAGAGTTCTTCCACC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G44 GTCCCCGGAGAATCATATTTCCGGTGGTTGCGGTGGATCACCGTCGTCATCCCCTGCATCGGTTTTAAGCAATAAAAATAATCGATGTTGCTTGTTTTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 GTCCCCGGAGAATCATATTTCCGGTGGTTGCGGTGGATCACCGTCGTCATCCCCTGCATCGGTTTTAAGCAATAAAAATAATCGATGTTGCTTGTTTTGT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G44 TCCCATTCTCCGACGAGTACTCTCTTGAATTTATCACGATCACCTTCATCGTCTCCGCCTTTGTCTCCAGCTGATAAAGCCGATGCATTTTCACGGCTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 TCCCATTCTCCGACGAGTACTCTCTTGAATTTATCACGATCACCTTCATCGTCTCCGCCTTTGTCTCCAGCTGATAAAGCCGATGCATTTTCACGGCTGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G44 GCCGCCGTCGCACCGCCGTACTAAACGAACTGATTAGTTCTTTAGATTCCTTAAGTCTCACGGAAGCACTTGCAGCTTCTTCATCGTCTCCCGTTACCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 GCCGCCGTCGCACCGCCGTACTAAACGAACTGATTAGTTCTTTAGATTCCTTAAGTCTCACGGAAGCACTTGCAGCTTCTTCATCGTCTCCCGTTACCAT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G44 GCCCATTTCCACGGCGACGATGATCGCTTCATCGAATCTAAGCAGCAACCACCACCACCACCGTCTTCCGCCGTGGCTTGATGTCGGAGACAGAGATCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 GCCCATTTCCACGGCGACGATGATCGCTTCATCGAATCTAAGCAGCAACCACCACCACCACCGTCTTCCGCCGTGGCTTGATGTCGGAGACAGAGATCTC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G44 CAATTACAACAGAGTAGTCCTCTACGATTTGCTCTTTCACCTTCTTCAACTCCAAGTTACCTCCATGGCCAGCTTCAGCCACCACCGTCGAGCTTCTTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 CAATTACAACAGAGTAGTCCTCTACGATTTGCTCTTTCACCTTCTTCAACTCCAAGTTACCTCCATGGCCAGCTTCAGCCACCACCGTCGAGCTTCTTTG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT5G44 GCGATGAATTCACACCACGTGGTGGCCGGCTAAGCGATTTCTCGGTGGCTGCAGCTGCGGCGGCCCAAGCTAGGGATAAAAATAGCTTTGAAGTCGGTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 GCGATGAATTCACACCACGTGGTGGCCGGCTAAGCGATTTCTCGGTGGCTGCAGCTGCGGCGGCCCAAGCTAGGGATAAAAATAGCTTTGAAGTCGGTTC 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 AT5G44 TAGTGGCGATCTTGATCTAGGATGGGTGAACGATCTTTTGACA ::::::::::::::::::::::::::::::::::::::::::: RE_046 TAGTGGCGATCTTGATCTAGGATGGGTGAACGATCTTTTGACA 1110 1120 1130 1140 10 20 30 40 50 60 70 80 90 100 AT5G44 MDVEHHKSGHISRPTVDIPPRKLLSSAKSPSSVSSPLRDYKEQKDYCYDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFH :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 MDVEHHKSGHISRPTVDIPPRKLLSSAKPPSSVSSPLRDYKEQKDYCYDSDSEDPYAGDHFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFH 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G44 YTGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHISGGCGGSPSSSPASVLSNKNNRCCLFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 YTGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHISGGCGGSPSSSPASVLSNKNNRCCLFC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G44 SHSPTSTLLNLSRSPSSSPPLSPADKADAFSRLSRRRTAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNLSSNHHHHRLPPWLDVGDRDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 SHSPTSTLLNLSRSPSSSPPLSPADKADAFSRLSRRRTAVLNELISSLDSLSLTEALAASSSSPVTMPISTATMIASSNLSSNHHHHRLPPWLDVGDRDL 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 AT5G44 QLQQSSPLRFALSPSSTPSYLHGQLQPPPSSFFGDEFTPRGGRLSDFSVAAAAAAQARDKNSFEVGSSGDLDLGWVNDLLT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_046 QLQQSSPLRFALSPSSTPSYLHGQLQPPPSSFFGDEFTPRGGRLSDFSVAAAAAAQARDKNSFEVGSSGDLDLGWVNDLLT 310 320 330 340 350 360 370 380

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