◆◆◆RE_0471 detail◆◆◆

Code name	RE_0471
Locus	AT1G69570
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.50%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0471_1197bp ATGTCTAAATCTAGAGATACGGAGATAAAGTTGTTTGGGAGGACAATCACATCTCTTTTAGATGTGAATTGTTATGATCCGTCGTCGTTGTCCCCTGTTC ACGATGTTTCTTCTGATCCAAGCAAGGAGGATTCGTCTTCTTCTTCATCTTCTTGTTCTCCAACTATTGGACCAATCAGGGTTCCGGTTAAAAAAAGTGA GCAAGAGAGTAACAAATTCAAAGATCCATATATATTATCCGATCTAAACGAACCACCAAAAGCAGTATCTGAGATTTCATCACCAAGAAGTTCCAAGAAC AACTGTGATCAACAGAGCGAGATCACAACAACAACTACCACAAGTACTACATCAGGAGAGAAATCAACGGCTCTCAAGAAACCGGACAAGCTTATTCCAT GTCCTAGATGTGAAAGCGCAAACACCAAATTCTGTTATTACAACAACTACAACGTGAACCAGCCACGTTACTTCTGCAGGAACTGTCAGAGGTATCGGAC AGCTGGTGGATCTATGAGGAACGTTCCTGTTGGCTCAGGTCGTCGCAAGAACAAAGGATGGCCTTCTTCAAACCATTACTTGCAAGTCACTTCTGAGGAT TGTGATAATAATAACTCGGGGACGATCCTTAGTTTCGGTTCTCCGGAGTCTTCGGTTACAGAGACTGGTAAGCATCAGTCAGGTGATACAGCAAAGATAA GTGCTGATTCAGTTTCTCAAGAAAATAAAAGCTACCAAGGGTTTCTTCCTCCGCAAGTAATGTTACCTAATAATTCTTCTCCTTGGCCTTACCAATGGAG TCCAACGGGTCCTAACGCTAGTTTCTACCCTGTCCCCTTCTACTGGGGATGCACGGTTCCGATATACCCTACCTCAGAGACTTCATCATGTTTAGGAAAA CGGTCAAGAGATCAAACTGAAGGAAGAATCAATGATACTAATACAACAATAACTACTACAAGAGCAAGATTGGTCTCAGAATCTCTTAGAATGAATATCG AAGCTAGTAAGAGCGCTGTGTGGTCTAAGTTACCGACAAAACCCGAGAAAAAAACGCAAGGGTTCAGTTTGTTCAATGGATTTGACACAAAGGGAAACAG CAACAGAAGTAGCTTGGTCTCCGAAACTTCTCACAGTCTACAAGCAAACCCTGCAGCGATGTCTAGAGCTATGAACTTCAGGGAGAGCATGCAACAA >RE_0471_translated MSKSRDTEIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIRVPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKN NCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYRTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSED CDNNNSGTILSFGSPESSVTETGKHQSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSSPWPYQWSPTGPNASFYPVPFYWGCTVPIYPTSETSSCLGK RSRDQTEGRINDTNTTITTTRARLVSESLRMNIEASKSAVWSKLPTKPEKKTQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRESMQQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1194/1197 (99.7%)（アミノ酸配列で397/399 (99.5%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G69 ATGTCTAAATCTAGAGATACGGAGATAAAGTTGTTTGGGAGGACAATCACATCTCTTTTAGATGTGAATTGTTATGATCCGTCGTCGTTGTCCCCTGTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 ATGTCTAAATCTAGAGATACGGAGATAAAGTTGTTTGGGAGGACAATCACATCTCTTTTAGATGTGAATTGTTATGATCCGTCGTCGTTGTCCCCTGTTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G69 ACGATGTTTCTTCTGATCCAAGCAAGGAGGATTCGTCTTCTTCTTCATCTTCTTGTTCTCCAACTATTGGACCAATCAGGGTTCCGGTTAAAAAAAGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 ACGATGTTTCTTCTGATCCAAGCAAGGAGGATTCGTCTTCTTCTTCATCTTCTTGTTCTCCAACTATTGGACCAATCAGGGTTCCGGTTAAAAAAAGTGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G69 GCAAGAGAGTAACAAATTCAAAGATCCATATATATTATCCGATCTAAACGAACCACCAAAAGCAGTATCTGAGATTTCATCACCAAGAAGTTCCAAGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 GCAAGAGAGTAACAAATTCAAAGATCCATATATATTATCCGATCTAAACGAACCACCAAAAGCAGTATCTGAGATTTCATCACCAAGAAGTTCCAAGAAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G69 AACTGTGATCAACAGAGCGAGATCACAACAACAACTACCACAAGTACTACATCAGGAGAGAAATCAACGGCTCTCAAGAAACCGGACAAGCTTATTCCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 AACTGTGATCAACAGAGCGAGATCACAACAACAACTACCACAAGTACTACATCAGGAGAGAAATCAACGGCTCTCAAGAAACCGGACAAGCTTATTCCAT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G69 GTCCTAGATGTGAAAGCGCAAACACCAAATTCTGTTATTACAACAACTACAACGTGAACCAGCCACGTTACTTCTGCAGGAACTGTCAGAGGTATTGGAC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: RE_047 GTCCTAGATGTGAAAGCGCAAACACCAAATTCTGTTATTACAACAACTACAACGTGAACCAGCCACGTTACTTCTGCAGGAACTGTCAGAGGTATCGGAC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G69 AGCTGGTGGATCTATGAGGAACGTTCCTGTTGGCTCAGGTCGTCGCAAGAACAAAGGATGGCCTTCTTCAAACCATTACTTGCAAGTCACTTCTGAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 AGCTGGTGGATCTATGAGGAACGTTCCTGTTGGCTCAGGTCGTCGCAAGAACAAAGGATGGCCTTCTTCAAACCATTACTTGCAAGTCACTTCTGAGGAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G69 TGTGATAATAATAACTCGGGGACGATCCTTAGTTTCGGTTCTTCGGAGTCTTCGGTTACAGAGACTGGTAAGCATCAGTCAGGTGATACAGCAAAGATAA :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 TGTGATAATAATAACTCGGGGACGATCCTTAGTTTCGGTTCTCCGGAGTCTTCGGTTACAGAGACTGGTAAGCATCAGTCAGGTGATACAGCAAAGATAA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G69 GTGCTGATTCAGTTTCTCAAGAAAATAAAAGCTACCAAGGGTTTCTTCCTCCGCAAGTAATGTTACCTAATAATTCTTCTCCTTGGCCTTACCAATGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 GTGCTGATTCAGTTTCTCAAGAAAATAAAAGCTACCAAGGGTTTCTTCCTCCGCAAGTAATGTTACCTAATAATTCTTCTCCTTGGCCTTACCAATGGAG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G69 TCCAACGGGTCCTAACGCTAGTTTCTACCCTGTCCCCTTCTACTGGGGATGCACGGTTCCGATATACCCTACCTCAGAGACTTCATCATGTTTAGGAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 TCCAACGGGTCCTAACGCTAGTTTCTACCCTGTCCCCTTCTACTGGGGATGCACGGTTCCGATATACCCTACCTCAGAGACTTCATCATGTTTAGGAAAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G69 CGGTCAAGAGATCAAACTGAAGGAAGAATCAATGATACTAATACAACAATAACTACTACAAGAGCAAGATTGGTCTCAGAATCTCTTAGAATGAATATCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 CGGTCAAGAGATCAAACTGAAGGAAGAATCAATGATACTAATACAACAATAACTACTACAAGAGCAAGATTGGTCTCAGAATCTCTTAGAATGAATATCG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G69 AAGCTAGTAAGAGCGCTGTGTGGTCTAAGTTACCGACAAAACCCGAGAAAAAAACGCAAGGATTCAGTTTGTTCAATGGATTTGACACAAAGGGAAACAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: RE_047 AAGCTAGTAAGAGCGCTGTGTGGTCTAAGTTACCGACAAAACCCGAGAAAAAAACGCAAGGGTTCAGTTTGTTCAATGGATTTGACACAAAGGGAAACAG 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 AT1G69 CAACAGAAGTAGCTTGGTCTCCGAAACTTCTCACAGTCTACAAGCAAACCCTGCAGCGATGTCTAGAGCTATGAACTTCAGGGAGAGCATGCAACAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 CAACAGAAGTAGCTTGGTCTCCGAAACTTCTCACAGTCTACAAGCAAACCCTGCAGCGATGTCTAGAGCTATGAACTTCAGGGAGAGCATGCAACAA 1110 1120 1130 1140 1150 1160 1170 1180 1190 10 20 30 40 50 60 70 80 90 100 AT1G69 MSKSRDTEIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIRVPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 MSKSRDTEIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIRVPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKN 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G69 NCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSED ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: RE_047 NCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYRTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSED 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G69 CDNNNSGTILSFGSSESSVTETGKHQSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSSPWPYQWSPTGPNASFYPVPFYWGCTVPIYPTSETSSCLGK :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 CDNNNSGTILSFGSPESSVTETGKHQSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSSPWPYQWSPTGPNASFYPVPFYWGCTVPIYPTSETSSCLGK 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G69 RSRDQTEGRINDTNTTITTTRARLVSESLRMNIEASKSAVWSKLPTKPEKKTQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRESMQQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 RSRDQTEGRINDTNTTITTTRARLVSESLRMNIEASKSAVWSKLPTKPEKKTQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMNFRESMQQ 310 320 330 340 350 360 370 380 390

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