| Code name | RE_0473 | |||
|---|---|---|---|---|
| Locus | AT2G34140 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列99.40%一致 | |||
| comment | 0420_アミノ酸配列70%以上一致 | |||
| sequence |
>RE_0473_507bp ATGGCGACTCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACTATTGCATTTAACACTCGAACAATAAAAAATGAAGAAGAGACACACCCGCCGGAGC AAGAAGCCACAATAGCCGTTAGATCATCATCATCGGATCTGACGGCCGAGAAGCGTCCGGATAAGATCATAGCATGTCCAAGATGCAAGAGCATGGAGAC AAAGTTCTGTTACTTCAACAACTACAACGTTAATCAGCCTCGACACTTTTGTAAAGGCTGCCACCGTTACTGGACCGCCGGTGGTGCACTCCGGAACGTT CCCGTCGGCGCCGGTCGTCGGAAGTCCAAACCACCTGGTCGTGTCGTGGTTGGTATGCTTGGAGATGGAAATGGTGTTCGCCAAGTCGAGCTTATAAATG GCTTGCTCGTTGAGGAGTGGCAGCATGCCGCAGCCGCAGCTCACGGTAGTTTCCGGCATGATTTTCCCATGAAGCGGCTCCGGTGTTACTCCGACGGTCA ATCGTGC >RE_0473_translated MATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSDLTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNV PVGAGRRKSKPPGRVVVGMLGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 507/510 (99.4%)（アミノ酸配列で169/170 (99.4%)）一致しました。
10 20 30 40 50 60 70 80 90 100
AT2G34 ATGGCGACTCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACTATTGCATTTAACACTCGAACAATAAAAAATGAAGAAGAGACACACCCGCCGGAGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_047 ATGGCGACTCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACTATTGCATTTAACACTCGAACAATAAAAAATGAAGAAGAGACACACCCGCCGGAGC
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT2G34 AAGAAGCCACAATAGCCGTTAGATCATCATCATCATCGGATCTGACGGCCGAGAAGCGTCCGGATAAGATCATAGCATGTCCAAGATGCAAGAGCATGGA
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_047 AAGAAGCCACAATAGCCGTTAG---ATCATCATCATCGGATCTGACGGCCGAGAAGCGTCCGGATAAGATCATAGCATGTCCAAGATGCAAGAGCATGGA
110 120 130 140 150 160 170 180 190
210 220 230 240 250 260 270 280 290 300
AT2G34 GACAAAGTTCTGTTACTTCAACAACTACAACGTTAATCAGCCTCGACACTTTTGTAAAGGCTGCCACCGTTACTGGACCGCCGGTGGTGCACTCCGGAAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_047 GACAAAGTTCTGTTACTTCAACAACTACAACGTTAATCAGCCTCGACACTTTTGTAAAGGCTGCCACCGTTACTGGACCGCCGGTGGTGCACTCCGGAAC
200 210 220 230 240 250 260 270 280 290
310 320 330 340 350 360 370 380 390 400
AT2G34 GTTCCCGTCGGCGCCGGTCGTCGGAAGTCCAAACCACCTGGTCGTGTCGTGGTTGGTATGCTTGGAGATGGAAATGGTGTTCGCCAAGTCGAGCTTATAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_047 GTTCCCGTCGGCGCCGGTCGTCGGAAGTCCAAACCACCTGGTCGTGTCGTGGTTGGTATGCTTGGAGATGGAAATGGTGTTCGCCAAGTCGAGCTTATAA
300 310 320 330 340 350 360 370 380 390
410 420 430 440 450 460 470 480 490 500
AT2G34 ATGGCTTGCTCGTTGAGGAGTGGCAGCATGCCGCAGCCGCAGCTCACGGTAGTTTCCGGCATGATTTTCCCATGAAGCGGCTCCGGTGTTACTCCGACGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_047 ATGGCTTGCTCGTTGAGGAGTGGCAGCATGCCGCAGCCGCAGCTCACGGTAGTTTCCGGCATGATTTTCCCATGAAGCGGCTCCGGTGTTACTCCGACGG
400 410 420 430 440 450 460 470 480 490
510
AT2G34 TCAATCGTGC
::::::::::
RE_047 TCAATCGTGC
500
10 20 30 40 50 60 70 80 90 100
AT2G34 MATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRN
::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_047 MATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVR-SSSSDLTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRN
10 20 30 40 50 60 70 80 90
110 120 130 140 150 160 170
AT2G34 VPVGAGRRKSKPPGRVVVGMLGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_047 VPVGAGRRKSKPPGRVVVGMLGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC
100 110 120 130 140 150 160
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