◆◆◆RE_0475 detail◆◆◆

Code name	RE_0475
Locus	AT2G46590
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列98.00%一致
comment	0115_アミノ酸配列70%以上一致/0422_アミノ酸配列70%以上一致
sequence	>RE_0475_1071bp ATGATGAACGTTAAACCAATGGAGCAGATCATGATTCCTAATAACAACACACATCAACCAAACACCACATCCTATGCAAGGCCAAACACCATTCTCACAT CTAACGGCGTCTCAGCTGCTGGAGCAACCGTCTCCGGCGTAAGCAACAACAATAACAATACGGCGGTTGTGGCGGAGAGGAAAGCAAGACCACAAGAGAA ACTAAATTGTCCAAGATGCAACTCAACCAACACAAAGTTTTGTTACTACAACAACTATAGTCTCACACAACCAATATACTTCTGCAAAGGTTGTCGAAGG TATTGGACCGAATGTGGATCTCTTAGGAATGTTCCTGTGGGAGGAAACTCACGAAAGAACAAGAGATCATCTTCATCTTCTTCATCAAACATCCTTCACA CAATACCATCTTCACTTCCAGATCTAAACTCGCCAATACTCTTCTCAAACCAAATCCATAATAAATCGAAAGGGTCATCACAAGATCTCAACTTGTTGTC TTTCCCAGTCATGCAAGATCAACATCATCATCATGTCCATATGTCTCAGTTTCTTCAGATGCCTAAGATGGAGGGAAATGGTAACATAACTCATCAGCAG CAGCCTTCATCATCTTCTTCTGTCTATGGTTCCTCGTCGTCTCCTGTTTCAGCTCTTGAACTTTTAAGAACCGGAGTTAATGTTTCTTCAAGATCAGGGA TTAACTCATCGTTCATGCCTTCCGGTTCAATGATGGATTCAAACACTGTGCTTTACACTTCTTCAGGGTTTCCAACAATGGTGGATTACAAGCCAAGTAA TCTCTCCTTCTCTACCGATCATCAAGGGCTTGGACACAATAGCAACAATAGGTCTGAAGCTCTTCATAGTGATCATCACCAACAAGGTAGAGTTTTGTTT CCATTTGGGGATCAAATGAAGGAGCTTTCATCAAGCATAACACAAGAAGTTGATCATGATGATAATCAACAACAGAAGAGTCATGGAAATAATAATAATA ATAATAACTCAAGCCCTAATAATGGATATTGGAGTGGGATGTTCAGTACTACAGGAGGAGGATCTTCATGG >RE_0475_translated MMNVKPMEQIMIPNNNTHQPNTTSYARPNTILTSNGVSAAGATVSGVSNNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPIYFCKGCRR YWTECGSLRNVPVGGNSRKNKRSSSSSSSNILHTIPSSLPDLNSPILFSNQIHNKSKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNITHQQ QPSSSSSVYGSSSSPVSALELLRTGVNVSSRSGINSSFMPSGSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTDHQGLGHNSNNRSEALHSDHHQQGRVLF PFGDQMKELSSSITQEVDHDDNQQQKSHGNNNNNNNSSPNNGYWSGMFSTTGGGSSW
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1063/1071 (99.3%)（アミノ酸配列で350/357 (98.0%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G46 ATGATGAACGTTAAACCAATGGAGCAGATCATGATTCCTAATAACAACACACATCAACCAAACACCACATCCAATGCAAGGCCAAACACCATTCTCACAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: RE_047 ATGATGAACGTTAAACCAATGGAGCAGATCATGATTCCTAATAACAACACACATCAACCAAACACCACATCCTATGCAAGGCCAAACACCATTCTCACAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G46 CTAACGGCGTCTCAACTGCTGGAGCAACCGTCTCCGGCGTAAGCAACAACAATAACAATACGGCGGTTGTGGCGGAGAGGAAAGCAAGACCACAAGAGAA :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 CTAACGGCGTCTCAGCTGCTGGAGCAACCGTCTCCGGCGTAAGCAACAACAATAACAATACGGCGGTTGTGGCGGAGAGGAAAGCAAGACCACAAGAGAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G46 ACTAAATTGTCCAAGATGCAACTCAACCAACACAAAGTTTTGTTACTACAACAACTATAGTCTCACACAACCAAGATACTTCTGCAAAGGTTGTCGAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: RE_047 ACTAAATTGTCCAAGATGCAACTCAACCAACACAAAGTTTTGTTACTACAACAACTATAGTCTCACACAACCAATATACTTCTGCAAAGGTTGTCGAAGG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G46 TATTGGACCGAAGGTGGATCTCTTAGGAATGTTCCTGTGGGAGGAAGCTCAAGAAAGAACAAGAGATCATCTTCATCTTCTTCATCAAACATCCTTCAGA :::::::::::: ::::::::::::::::::::::::::::::::: :::: :::::::::::::::::::::::::::::::::::::::::::::: : RE_047 TATTGGACCGAATGTGGATCTCTTAGGAATGTTCCTGTGGGAGGAAACTCACGAAAGAACAAGAGATCATCTTCATCTTCTTCATCAAACATCCTTCACA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G46 CAATACCATCTTCACTTCCAGATCTAAACCCGCCAATACTCTTCTCAAACCAAATCCATAATAAATCGAAAGGGTCATCACAAGATCTCAACTTGTTGTC ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 CAATACCATCTTCACTTCCAGATCTAAACTCGCCAATACTCTTCTCAAACCAAATCCATAATAAATCGAAAGGGTCATCACAAGATCTCAACTTGTTGTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G46 TTTCCCAGTCATGCAAGATCAACATCATCATCATGTCCATATGTCTCAGTTTCTTCAGATGCCTAAGATGGAGGGAAATGGTAACATAACTCATCAGCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 TTTCCCAGTCATGCAAGATCAACATCATCATCATGTCCATATGTCTCAGTTTCTTCAGATGCCTAAGATGGAGGGAAATGGTAACATAACTCATCAGCAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G46 CAGCCTTCATCATCTTCTTCTGTCTATGGTTCCTCGTCGTCTCCTGTTTCAGCTCTTGAACTTTTAAGAACCGGAGTTAATGTTTCTTCAAGATCAGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 CAGCCTTCATCATCTTCTTCTGTCTATGGTTCCTCGTCGTCTCCTGTTTCAGCTCTTGAACTTTTAAGAACCGGAGTTAATGTTTCTTCAAGATCAGGGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G46 TTAACTCATCGTTCATGCCTTCCGGTTCAATGATGGATTCAAACACTGTGCTTTACACTTCTTCAGGGTTTCCAACAATGGTGGATTACAAGCCAAGTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 TTAACTCATCGTTCATGCCTTCCGGTTCAATGATGGATTCAAACACTGTGCTTTACACTTCTTCAGGGTTTCCAACAATGGTGGATTACAAGCCAAGTAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G46 TCTCTCCTTCTCTACCGATCATCAAGGGCTTGGACACAATAGCAACAATAGGTCTGAAGCTCTTCATAGTGATCATCACCAACAAGGTAGAGTTTTGTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 TCTCTCCTTCTCTACCGATCATCAAGGGCTTGGACACAATAGCAACAATAGGTCTGAAGCTCTTCATAGTGATCATCACCAACAAGGTAGAGTTTTGTTT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G46 CCATTTGGGGATCAAATGAAGGAGCTTTCATCAAGCATAACACAAGAAGTTGATCATGATGATAATCAACAACAGAAGAGTCATGGAAATAATAATAATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 CCATTTGGGGATCAAATGAAGGAGCTTTCATCAAGCATAACACAAGAAGTTGATCATGATGATAATCAACAACAGAAGAGTCATGGAAATAATAATAATA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 AT2G46 ATAATAACTCAAGCCCTAATAATGGATATTGGAGTGGGATGTTCAGTACTACAGGAGGAGGATCTTCATGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 ATAATAACTCAAGCCCTAATAATGGATATTGGAGTGGGATGTTCAGTACTACAGGAGGAGGATCTTCATGG 1010 1020 1030 1040 1050 1060 1070 10 20 30 40 50 60 70 80 90 100 AT2G46 MMNVKPMEQIMIPNNNTHQPNTTSNARPNTILTSNGVSTAGATVSGVSNNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRR :::::::::::::::::::::::: ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: RE_047 MMNVKPMEQIMIPNNNTHQPNTTSYARPNTILTSNGVSAAGATVSGVSNNNNNTAVVAERKARPQEKLNCPRCNSTNTKFCYYNNYSLTQPIYFCKGCRR 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G46 YWTEGGSLRNVPVGGSSRKNKRSSSSSSSNILQTIPSSLPDLNPPILFSNQIHNKSKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNITHQQ :::: ::::::::::.:::::::::::::::: :::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 YWTECGSLRNVPVGGNSRKNKRSSSSSSSNILHTIPSSLPDLNSPILFSNQIHNKSKGSSQDLNLLSFPVMQDQHHHHVHMSQFLQMPKMEGNGNITHQQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G46 QPSSSSSVYGSSSSPVSALELLRTGVNVSSRSGINSSFMPSGSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTDHQGLGHNSNNRSEALHSDHHQQGRVLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 QPSSSSSVYGSSSSPVSALELLRTGVNVSSRSGINSSFMPSGSMMDSNTVLYTSSGFPTMVDYKPSNLSFSTDHQGLGHNSNNRSEALHSDHHQQGRVLF 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT2G46 PFGDQMKELSSSITQEVDHDDNQQQKSHGNNNNNNNSSPNNGYWSGMFSTTGGGSSW ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_047 PFGDQMKELSSSITQEVDHDDNQQQKSHGNNNNNNNSSPNNGYWSGMFSTTGGGSSW 310 320 330 340 350

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