◆◆◆RE_04A01 detail◆◆◆

Code name	RE_04A01
Locus	AT2G23290
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_04A01_927bp ATGTCTGGTTCGACCCGGAAAGAAATGGATCGGATCAAAGGACCATGGAGTCCTGAAGAAGACGATCTGTTACAATCGTTGGTTCAGAAGCACGGACCAA GGAACTGGTCTCTGATAAGCAAATCAATCCCTGGACGTTCCGGTAAATCTTGCCGTCTCCGTTGGTGTAATCAGCTTTCTCCGGAGGTAGAGCACCGTGG ATTCACGGCGGAGGAAGATGATACGATTATACTAGCGCACGCTCGGTTTGGTAACAAGTGGGCGACGATTGCACGGCTTCTCAATGGTCGCACTGATAAC GCGATTAAGAATCACTGGAACTCAACGCTGAAGCGGAAATGTAGCGGCGGAGGCGGCGGAGGAGAGGAAGGGCAGAGTTGTGATTTCGGTGGTAATGGAG GGTATGATGGTAATTTAACTGATGAAAAACCGTTAAAACGGAGGGCGAGTGGTGGAGGAGGAGTTGTTGTGGTGACGGCGTTAAGTCCAACGGGATCTGA CGTCAGCGAGCAATCGCAATCTAGTGGATCTGTTTTACCGGTTTCTTCTTCTTGTCATGTTTTTAAACCGACGGCGAGAGCTGGTGGAGTGGTGATTGAG TCATCATCGCCGGAGGAGGAGGAGAAAGATCCGATGACTTGTTTGAGGTTGTCTTTGCCTTGGGTCAATGAGTCAACAACTCCACCGGAGTTGTTTCCGG TGAAGAGAGAAGAAGAAGAAGAGAAGGAAAGAGAGATTTCTGGACTTGGTGGAGATTTTATGACGGTGGTGCAGGAGATGATTAAGACGGAGGTTAGGAG TTACATGGCGGATTTACAGCTAGGAAGCGGCGGAGGAGCTGGAGGAGGAGCAAGTTCGTGTATGGTGCAAGGAACTAATGGTCGTAATGTAGGGTTTAGA GAGTTTATTGGATTAGGTAGGATCGAG >RE_04A01_translated MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDN AIKNHWNSTLKRKCSGGGGGGEEGQSCDFGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLPVSSSCHVFKPTARAGGVVIE SSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEEEEKEREISGLGGDFMTVVQEMIKTEVRSYMADLQLGSGGGAGGGASSCMVQGTNGRNVGFR EFIGLGRIE
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 926/927 (99.9%)（アミノ酸配列で308/309 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G23 ATGTCTGGTTCGACCCGGAAAGAAATGGATCGGATCAAAGGACCATGGAGTCCTGAAGAAGACGATCTGTTACAATCGTTGGTTCAGAAGCACGGACCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A ATGTCTGGTTCGACCCGGAAAGAAATGGATCGGATCAAAGGACCATGGAGTCCTGAAGAAGACGATCTGTTACAATCGTTGGTTCAGAAGCACGGACCAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G23 GGAACTGGTCTCTGATAAGCAAATCAATCCCTGGACGTTCCGGTAAATCTTGCCGTCTCCGTTGGTGTAATCAGCTTTCTCCGGAGGTAGAGCACCGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A GGAACTGGTCTCTGATAAGCAAATCAATCCCTGGACGTTCCGGTAAATCTTGCCGTCTCCGTTGGTGTAATCAGCTTTCTCCGGAGGTAGAGCACCGTGG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G23 ATTCACGGCGGAGGAAGATGATACGATTATACTAGCGCACGCTCGGTTTGGTAACAAGTGGGCGACGATTGCACGGCTTCTCAATGGTCGCACTGATAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A ATTCACGGCGGAGGAAGATGATACGATTATACTAGCGCACGCTCGGTTTGGTAACAAGTGGGCGACGATTGCACGGCTTCTCAATGGTCGCACTGATAAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G23 GCGATTAAGAATCACTGGAACTCAACGCTGAAGCGGAAATGTAGCGGCGGAGGCGGCGGAGGAGAGGAAGGGCAGAGTTGTGATTTCGGTGGTAATGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A GCGATTAAGAATCACTGGAACTCAACGCTGAAGCGGAAATGTAGCGGCGGAGGCGGCGGAGGAGAGGAAGGGCAGAGTTGTGATTTCGGTGGTAATGGAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G23 GGTATGATGGTAATTTAACTGATGAAAAACCGTTAAAACGGAGGGCGAGTGGTGGAGGAGGAGTTGTTGTGGTGACGGCGTTAAGTCCAACGGGATCTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A GGTATGATGGTAATTTAACTGATGAAAAACCGTTAAAACGGAGGGCGAGTGGTGGAGGAGGAGTTGTTGTGGTGACGGCGTTAAGTCCAACGGGATCTGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G23 CGTCAGCGAGCAATCGCAATCTAGTGGATCTGTTTTACCGGTTTCTTCTTCTTGTCATGTTTTTAAACCGACGGCGAGAGCTGGTGGAGTGGTGATTGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A CGTCAGCGAGCAATCGCAATCTAGTGGATCTGTTTTACCGGTTTCTTCTTCTTGTCATGTTTTTAAACCGACGGCGAGAGCTGGTGGAGTGGTGATTGAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G23 TCATCATCGCCGGAGGAGGAGGAGAAAGATCCGATGACTTGTTTGAGGTTGTCTTTGCCTTGGGTCAATGAGTCAACAACTCCACCGGAGTTGTTTCCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A TCATCATCGCCGGAGGAGGAGGAGAAAGATCCGATGACTTGTTTGAGGTTGTCTTTGCCTTGGGTCAATGAGTCAACAACTCCACCGGAGTTGTTTCCGG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G23 TGAAGAGAGAAGAAGAAGAAGAGAAGGAAAGAGAGATTTCTGGACTTGGTGGAGATTTTATGACGGTGGTGCAGGAGATGATTAAGACGGAGGTTAGGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A TGAAGAGAGAAGAAGAAGAAGAGAAGGAAAGAGAGATTTCTGGACTTGGTGGAGATTTTATGACGGTGGTGCAGGAGATGATTAAGACGGAGGTTAGGAG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G23 TTACATGGCGGATTTACAGCTAGGAAACGGCGGAGGAGCTGGAGGAGGAGCAAGTTCGTGTATGGTGCAAGGAACTAATGGTCGTAATGTAGGGTTTAGA :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A TTACATGGCGGATTTACAGCTAGGAAGCGGCGGAGGAGCTGGAGGAGGAGCAAGTTCGTGTATGGTGCAAGGAACTAATGGTCGTAATGTAGGGTTTAGA 810 820 830 840 850 860 870 880 890 900 910 920 AT2G23 GAGTTTATTGGATTAGGTAGGATCGAG ::::::::::::::::::::::::::: RE_04A GAGTTTATTGGATTAGGTAGGATCGAG 910 920 10 20 30 40 50 60 70 80 90 100 AT2G23 MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDN 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G23 AIKNHWNSTLKRKCSGGGGGGEEGQSCDFGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLPVSSSCHVFKPTARAGGVVIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A AIKNHWNSTLKRKCSGGGGGGEEGQSCDFGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLPVSSSCHVFKPTARAGGVVIE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G23 SSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEEEEKEREISGLGGDFMTVVQEMIKTEVRSYMADLQLGNGGGAGGGASSCMVQGTNGRNVGFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: RE_04A SSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEEEEKEREISGLGGDFMTVVQEMIKTEVRSYMADLQLGSGGGAGGGASSCMVQGTNGRNVGFR 210 220 230 240 250 260 270 280 290 300 AT2G23 EFIGLGRIE ::::::::: RE_04A EFIGLGRIE

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