◆◆◆RE_04A07 detail◆◆◆

Code name	RE_04A07
Locus	AT1G36060
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_04A07_942bp ATGGCGGATCTCTTCGGTGGTGGCCACGGCGGCGAGCTTATGGAAGCACTTCAACCTTTTTACAAAAGTGCTTCCACGTCTGCTTCAAATCCTGCGTTTG CGTCCTCAAACGATGCGTTTGCGTCTGCCCCAAACGACCTATTTTCTTCTTCTTCTTACTATAATCCTCATGCATCTTTATTCCCTTCACATTCCACAAC CTCTTACCCGGATATTTATTCTGGATCCATGACCTATCCATCTTCATTCGGGTCGGATCTTCAACAACCCGAAAACTACCAATCTCAGTTCCATTACCAA AACACTATCACTTACACTCACCAAGACAACAACACTTGCATGCTTAACTTCATTGAGCCGAGCCAACCGGGTTTTATGACCCAACCGGGTCCGAGTTCGG GTTCGGTTTCAAAACCGGCTAAGCTCTATAGAGGAGTGAGGCAAAGACATTGGGGAAAATGGGTCGCGGAGATCCGTTTACCCAGGAACCGAACCCGACT TTGGCTCGGAACACTCGACACGGCTGAAGAAGCCGCGTTGGCTTATGATCGCGCCGCGTTTAAGCTTCGTGGTGACTCGGCTCGGCTTAACTTCCCAGCT CTCCGATACCAAACCGGCTCGTCTCCGTCTGATACCGGCGAATATGGTCCTATTCAAGCTGCCGTAGACGCAAAACTAGAAGCCATATTAGCTGAGCCGA AGAATCAGCCGGGCAAAACGGAGAGGACGTCGAGGAAACGAGCTAAAGCCGCGGCTTCTTCAGCTGAGCAGCCGTCAGCGCCACAACAACATTCCGGGTC GGGTGAAAGTGATGGGTCGGGTTCACCGACTTCGGATGTTATGGTGCAGGAGATGTGCCAAGAGCCAGAGATGCCATGGAATGAAAATTTCATGCTCGGC AAGTGTCCTTCTTATGAGATAGATTGGGCTTCAATTTTATCG >RE_04A07_translated MADLFGGGHGGELMEALQPFYKSASTSASNPAFASSNDAFASAPNDLFSSSSYYNPHASLFPSHSTTSYPDIYSGSMTYPSSFGSDLQQPENYQSQFHYQ NTITYTHQDNNTCMLNFIEPSQPGFMTQPGPSSGSVSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTLDTAEEAALAYDRAAFKLRGDSARLNFPA LRYQTGSSPSDTGEYGPIQAAVDAKLEAILAEPKNQPGKTERTSRKRAKAAASSAEQPSAPQQHSGSGESDGSGSPTSDVMVQEMCQEPEMPWNENFMLG KCPSYEIDWASILS
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 940/942 (99.8%)（アミノ酸配列で313/314 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G36 ATGGCGGATCTCTTCGGTGGTGGCCACGGCGGCGAGCTTATGGAAGCACTTCAACCTTTTTACAAAAGTGCTTCCACGTCTGCTTCAAATCCTGCGTTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A ATGGCGGATCTCTTCGGTGGTGGCCACGGCGGCGAGCTTATGGAAGCACTTCAACCTTTTTACAAAAGTGCTTCCACGTCTGCTTCAAATCCTGCGTTTG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G36 CGTCCTCAAACGATGCGTTTGCGTCTGCCCCAAACGACCTATTTTCTTCTTCTTCTTACTATAATCCTCATGCATCTTTATTCCCTTCACATTCCACAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A CGTCCTCAAACGATGCGTTTGCGTCTGCCCCAAACGACCTATTTTCTTCTTCTTCTTACTATAATCCTCATGCATCTTTATTCCCTTCACATTCCACAAC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G36 CTCTTACCCGGATATTTATTCTGGATCCATGACCTATCCATCTTCATTCGGGTCGGATCTTCAACAACCCGAAAACTACCAATCTCAGTTCCATTACCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A CTCTTACCCGGATATTTATTCTGGATCCATGACCTATCCATCTTCATTCGGGTCGGATCTTCAACAACCCGAAAACTACCAATCTCAGTTCCATTACCAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G36 AACACTATCACTTACACTCACCAAGACAACAACACTTGCATGCTTAACTTCATTGAGCCGAGCCAACCGGGTTTTATGACCCAACCGGGTCCGAGTTCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A AACACTATCACTTACACTCACCAAGACAACAACACTTGCATGCTTAACTTCATTGAGCCGAGCCAACCGGGTTTTATGACCCAACCGGGTCCGAGTTCGG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G36 GTTCGGTTTCAAAACCGGCTAAGCTCTATAGAGGAGTGAGGCAAAGACATTGGGGAAAATGGGTCGCGGAGATCCGTTTACCCAGGAACCGAACCCGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A GTTCGGTTTCAAAACCGGCTAAGCTCTATAGAGGAGTGAGGCAAAGACATTGGGGAAAATGGGTCGCGGAGATCCGTTTACCCAGGAACCGAACCCGACT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G36 TTGGCTCGGAACATTCGACACGGCTGAAGAAGCCGCGTTGGCTTATGATCGCGCCGCGTTTAAGCTTCGTGGTGACTCGGCTCGGCTTAACTTCCCAGCT ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A TTGGCTCGGAACACTCGACACGGCTGAAGAAGCCGCGTTGGCTTATGATCGCGCCGCGTTTAAGCTTCGTGGTGACTCGGCTCGGCTTAACTTCCCAGCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G36 CTCCGATACCAAACCGGCTCGTCTCCGTCTGATACCGGCGAATATGGTCCTATTCAAGCTGCCGTAGACGCTAAACTAGAAGCCATATTAGCTGAGCCGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: RE_04A CTCCGATACCAAACCGGCTCGTCTCCGTCTGATACCGGCGAATATGGTCCTATTCAAGCTGCCGTAGACGCAAAACTAGAAGCCATATTAGCTGAGCCGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G36 AGAATCAGCCGGGCAAAACGGAGAGGACGTCGAGGAAACGAGCTAAAGCCGCGGCTTCTTCAGCTGAGCAGCCGTCAGCGCCACAACAACATTCCGGGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A AGAATCAGCCGGGCAAAACGGAGAGGACGTCGAGGAAACGAGCTAAAGCCGCGGCTTCTTCAGCTGAGCAGCCGTCAGCGCCACAACAACATTCCGGGTC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G36 GGGTGAAAGTGATGGGTCGGGTTCACCGACTTCGGATGTTATGGTGCAGGAGATGTGCCAAGAGCCAGAGATGCCATGGAATGAAAATTTCATGCTCGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A GGGTGAAAGTGATGGGTCGGGTTCACCGACTTCGGATGTTATGGTGCAGGAGATGTGCCAAGAGCCAGAGATGCCATGGAATGAAAATTTCATGCTCGGC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 AT1G36 AAGTGTCCTTCTTATGAGATAGATTGGGCTTCAATTTTATCG :::::::::::::::::::::::::::::::::::::::::: RE_04A AAGTGTCCTTCTTATGAGATAGATTGGGCTTCAATTTTATCG 910 920 930 940 10 20 30 40 50 60 70 80 90 100 AT1G36 MADLFGGGHGGELMEALQPFYKSASTSASNPAFASSNDAFASAPNDLFSSSSYYNPHASLFPSHSTTSYPDIYSGSMTYPSSFGSDLQQPENYQSQFHYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A MADLFGGGHGGELMEALQPFYKSASTSASNPAFASSNDAFASAPNDLFSSSSYYNPHASLFPSHSTTSYPDIYSGSMTYPSSFGSDLQQPENYQSQFHYQ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G36 NTITYTHQDNNTCMLNFIEPSQPGFMTQPGPSSGSVSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: RE_04A NTITYTHQDNNTCMLNFIEPSQPGFMTQPGPSSGSVSKPAKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTLDTAEEAALAYDRAAFKLRGDSARLNFPA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G36 LRYQTGSSPSDTGEYGPIQAAVDAKLEAILAEPKNQPGKTERTSRKRAKAAASSAEQPSAPQQHSGSGESDGSGSPTSDVMVQEMCQEPEMPWNENFMLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04A LRYQTGSSPSDTGEYGPIQAAVDAKLEAILAEPKNQPGKTERTSRKRAKAAASSAEQPSAPQQHSGSGESDGSGSPTSDVMVQEMCQEPEMPWNENFMLG 210 220 230 240 250 260 270 280 290 300 310 AT1G36 KCPSYEIDWASILS :::::::::::::: RE_04A KCPSYEIDWASILS 310

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