| Code name | RE_04A09 | |||
|---|---|---|---|---|
| Locus | AT1G71130 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列99.40%一致 | |||
| comment | ||||
| sequence |
>RE_04A09_483bp ATGAAGCGTATTATCAGAATCTCATTCACCGACGCAGAAGCCACCGATTCTTCTAGCGACGAAGACACGGAGGAGCGTGGAGGAGCATCCCAGACTCGGC GCCGTGGGAAACGCCTCGTTAAAGAGATCGTAATCGATCCTTCCGATTCCGCCGATAAACTCGATGTCTGCAAAACACGGTTCAAAATCAGGATCCCGGC GGAATTTCTCAAGACGGCGAAAACGGAGAAGAAATATCGTGGAGTGAGGCAGAGGTCGTGGGGGAAGTGGGTGGCGGAGATCAGATGTGGAAGAGGAGCT TGTAAAGGACGACGTGATCGTCTCTGGCTGGGTACTTTTAACACTGCTGAGGAAGCTGCTCTAGCTTATGATAACGCTTCAATTAAGCTGATTGGACCTC ACGCGCCGACCAATTTTGGTTTGCCGGCGGAGAATCAAGAGGATAAGACGGTGATTGGAGCTTCTGAGGTTGCTAGAGGCGCG >RE_04A09_translated MKRIIRISFTDAEATDSSSDEDTEERGGASQTRRRGKRLVKEIVIDPSDSADKLDVCKTRFKIRIPAEFLKTAKTEKKYRGVRQRSWGKWVAEIRCGRGA CKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPTNFGLPAENQEDKTVIGASEVARGA |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 482/483 (99.8%)（アミノ酸配列で160/161 (99.4%)）一致しました。
10 20 30 40 50 60 70 80 90 100
AT1G71 ATGAAGCGTATTATCAGAATCTCATTCACCGACGCAGAAGCCACCGATTCTTCTAGCGACGAAGACACGGAGGAGCGTGGAGGAGCATCCCAGACTCGGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A ATGAAGCGTATTATCAGAATCTCATTCACCGACGCAGAAGCCACCGATTCTTCTAGCGACGAAGACACGGAGGAGCGTGGAGGAGCATCCCAGACTCGGC
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G71 GCCGTGGGAAACGCCTCGTTAAAGAGATCGTAATCGATCCTTCCGATTCCGCCGATAAACTCGATGTCTGCAAAACACGGTTCAAAATCAGGATCCCGGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A GCCGTGGGAAACGCCTCGTTAAAGAGATCGTAATCGATCCTTCCGATTCCGCCGATAAACTCGATGTCTGCAAAACACGGTTCAAAATCAGGATCCCGGC
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT1G71 GGAATTTCTCAAGACGGCGAAAACGGAGAAGAAATATCGTGGAGTGAGGCAGAGGCCGTGGGGGAAGTGGGTGGCGGAGATCAGATGTGGAAGAGGAGCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
RE_04A GGAATTTCTCAAGACGGCGAAAACGGAGAAGAAATATCGTGGAGTGAGGCAGAGGTCGTGGGGGAAGTGGGTGGCGGAGATCAGATGTGGAAGAGGAGCT
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT1G71 TGTAAAGGACGACGTGATCGTCTCTGGCTGGGTACTTTTAACACTGCTGAGGAAGCTGCTCTAGCTTATGATAACGCTTCAATTAAGCTGATTGGACCTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A TGTAAAGGACGACGTGATCGTCTCTGGCTGGGTACTTTTAACACTGCTGAGGAAGCTGCTCTAGCTTATGATAACGCTTCAATTAAGCTGATTGGACCTC
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480
AT1G71 ACGCGCCGACCAATTTTGGTTTGCCGGCGGAGAATCAAGAGGATAAGACGGTGATTGGAGCTTCTGAGGTTGCTAGAGGCGCG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A ACGCGCCGACCAATTTTGGTTTGCCGGCGGAGAATCAAGAGGATAAGACGGTGATTGGAGCTTCTGAGGTTGCTAGAGGCGCG
410 420 430 440 450 460 470 480
10 20 30 40 50 60 70 80 90 100
AT1G71 MKRIIRISFTDAEATDSSSDEDTEERGGASQTRRRGKRLVKEIVIDPSDSADKLDVCKTRFKIRIPAEFLKTAKTEKKYRGVRQRPWGKWVAEIRCGRGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
RE_04A MKRIIRISFTDAEATDSSSDEDTEERGGASQTRRRGKRLVKEIVIDPSDSADKLDVCKTRFKIRIPAEFLKTAKTEKKYRGVRQRSWGKWVAEIRCGRGA
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160
AT1G71 CKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPTNFGLPAENQEDKTVIGASEVARGA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A CKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPTNFGLPAENQEDKTVIGASEVARGA
110 120 130 140 150 160
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