| Code name | RE_04A12 | |||
|---|---|---|---|---|
| Locus | AT3G23230 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列99.30%一致 | |||
| comment | ||||
| sequence |
>RE_04A12_417bp ATGGAGAGCTCAAACAGGAGCAGCAACAACCAATCACAAGATGACAAGCAAGCTCGTTTCCGGGGAGTTCGAAGAAGGCCTTGGGGAAAGTTTGCAGCAG AGATTCGAGACCCGTCGAGAAACGGTGCCCGTCTTTGGCTCGGGACATTTGAGACCGCTGAGGAGGCAGCAAGGGCTTATGACCGAGCAGCCTTTAACCC TAGGGGTCATCTCGCTATACTCAACTTCCCTAATGAGTATTATCCACGTATGGACGACTACTCGCTTCGCCCTCCTTATGCTTCTTCTTCTTCGTCGTCG TCATCGGGTTCAACTTCTACTAATGTGAGTCGACAAAACCAAAGAGAAGTTTTCGAGTTTGAGTATTTGGACGATAAGGTTCTTGAAGAACTTCTTGATT CAGAAGAAAGGAAGAGA >RE_04A12_translated MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNPRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSS SSGSTSTNVSRQNQREVFEFEYLDDKVLEELLDSEERKR |
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| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 416/417 (99.8%)（アミノ酸配列で138/139 (99.3%)）一致しました。
10 20 30 40 50 60 70 80 90 100
AT3G23 ATGGAGAGCTCAAACAGGAGCAGCAACAACCAATCACAAGATGACAAGCAAGCTCGTTTCCGGGGAGTTCGAAGAAGGCCTTGGGGAAAGTTTGCAGCAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A ATGGAGAGCTCAAACAGGAGCAGCAACAACCAATCACAAGATGACAAGCAAGCTCGTTTCCGGGGAGTTCGAAGAAGGCCTTGGGGAAAGTTTGCAGCAG
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT3G23 AGATTCGAGACCCGTCGAGAAACGGTGCCCGTCTTTGGCTCGGGACATTTGAGACCGCTGAGGAGGCAGCAAGGGCTTATGACCGAGCAGCCTTTAACCT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A AGATTCGAGACCCGTCGAGAAACGGTGCCCGTCTTTGGCTCGGGACATTTGAGACCGCTGAGGAGGCAGCAAGGGCTTATGACCGAGCAGCCTTTAACCC
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT3G23 TAGGGGTCATCTCGCTATACTCAACTTCCCTAATGAGTATTATCCACGTATGGACGACTACTCGCTTCGCCCTCCTTATGCTTCTTCTTCTTCGTCGTCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A TAGGGGTCATCTCGCTATACTCAACTTCCCTAATGAGTATTATCCACGTATGGACGACTACTCGCTTCGCCCTCCTTATGCTTCTTCTTCTTCGTCGTCG
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT3G23 TCATCGGGTTCAACTTCTACTAATGTGAGTCGACAAAACCAAAGAGAAGTTTTCGAGTTTGAGTATTTGGACGATAAGGTTCTTGAAGAACTTCTTGATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04A TCATCGGGTTCAACTTCTACTAATGTGAGTCGACAAAACCAAAGAGAAGTTTTCGAGTTTGAGTATTTGGACGATAAGGTTCTTGAAGAACTTCTTGATT
310 320 330 340 350 360 370 380 390 400
410
AT3G23 CAGAAGAAAGGAAGAGA
:::::::::::::::::
RE_04A CAGAAGAAAGGAAGAGA
410
10 20 30 40 50 60 70 80 90 100
AT3G23 MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSS
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
RE_04A MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNPRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSS
10 20 30 40 50 60 70 80 90 100
110 120 130
AT3G23 SSGSTSTNVSRQNQREVFEFEYLDDKVLEELLDSEERKR
:::::::::::::::::::::::::::::::::::::::
RE_04A SSGSTSTNVSRQNQREVFEFEYLDDKVLEELLDSEERKR
110 120 130
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