◆◆◆RE_04B04 detail◆◆◆

Code name	RE_04B04
Locus	AT1G69010
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_04B04_933bp ATGAGAACCGGAAAAGGAAATCAAGAGGAAGAAGATTACGGAGAAGAAGACTTTAACTCTAAACGTGAAGGTCCTTCTTCCAACACTACTGTTCATAGCA ACAGAGATTCAAAGGAAAATGATAAAGCTAGTGCGATACGTTCTAAACATTCGGTCACTGAGCAACGTAGAAGAAGCAAAATCAATGAAAGATTTCAGAT ATTGGGAGAACTAATTCCCAACAGTGAACAAAAACGTGACACTGCTTCATTCCTTTTAGAGGTGATAGATTATGTTCAGTATTTACAAGAGAAGGTGCAA AAGTATGAAGGATCGTATCCAGGTTGGAGTCAGGAACCAACAAAGTTGACGCCATGGAGGAATAATCATTGGCGAGTTCAAAGTTTGGGGAACCACCCAG TAGCTATAAATAATGGATCTGGTCCAGGGATACCTTTTCCTGGAAAGTTTGAAGACAACACTGTGACTTCGACACCTGCAATTATTGCAGAACCGCAAAT CCCGATTGAATCTGACAAAGCAAGAGCTATAACCGGCATATCGATTGAAAGTCAACCTGAGTTAGACGACAAAGGATTACCACCACTACAACCAATTCTT CCAATGGTACAAGGCGAACAAGCTAATGAATGTCCTGCAACTAGTGATGGGCTAGGCCAAAGTAATGACCTGGTTATTGAAGGTGGAACCATTAGCATCT CTAGTGCCTACTCGCATGAGTTATTGAGCTCATTAACACAAGCACTCCAGAATGCAGGCATTGATCTGTCGCAAGCAAAGCTTTCTGTGCAGATCGATCT TGGGAAGCGAGCCAATCAAGGTCTAACCCATGAAGAGCCATCAAGTAAGAATCCATTATCATATGATACGCAAGGAAGGGATTCAAGCGTTGAGGAAGAA TCTGAACATTCTCACAAGCGGATGAAAACACTG >RE_04B04_translated MRTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILGELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ KYEGSYPGWSQEPTKLTPWRNNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGISIESQPELDDKGLPPLQPIL PMVQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSKNPLSYDTQGRDSSVEEE SEHSHKRMKTL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 931/933 (99.8%)（アミノ酸配列で310/311 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G69 ATGAGAACCGGAAAAGGAAATCAAGAGGAAGAAGATTACGGAGAAGAAGACTTTAACTCTAAACGTGAAGGTCCTTCTTCCAACACTACTGTTCATAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B ATGAGAACCGGAAAAGGAAATCAAGAGGAAGAAGATTACGGAGAAGAAGACTTTAACTCTAAACGTGAAGGTCCTTCTTCCAACACTACTGTTCATAGCA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G69 ACAGAGATTCAAAGGAAAATGATAAAGCTAGTGCGATACGTTCTAAACATTCGGTCACTGAGCAACGTAGAAGAAGCAAAATCAATGAAAGATTTCAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B ACAGAGATTCAAAGGAAAATGATAAAGCTAGTGCGATACGTTCTAAACATTCGGTCACTGAGCAACGTAGAAGAAGCAAAATCAATGAAAGATTTCAGAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G69 ATTGAGAGAACTAATTCCCAACAGTGAACAAAAACGTGACACTGCTTCATTCCTTTTAGAGGTGATAGATTATGTTCAGTATTTACAAGAGAAGGTGCAA :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B ATTGGGAGAACTAATTCCCAACAGTGAACAAAAACGTGACACTGCTTCATTCCTTTTAGAGGTGATAGATTATGTTCAGTATTTACAAGAGAAGGTGCAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G69 AAGTATGAAGGATCGTATCCAGGTTGGAGTCAGGAACCAACAAAGTTGACGCCATGGAGGAATAATCATTGGCGAGTTCAAAGTTTGGGGAACCACCCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B AAGTATGAAGGATCGTATCCAGGTTGGAGTCAGGAACCAACAAAGTTGACGCCATGGAGGAATAATCATTGGCGAGTTCAAAGTTTGGGGAACCACCCAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G69 TAGCTATAAATAATGGATCTGGTCCAGGGATACCTTTTCCTGGAAAGTTTGAAGACAACACTGTGACTTCGACACCTGCAATTATTGCAGAACCGCAAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TAGCTATAAATAATGGATCTGGTCCAGGGATACCTTTTCCTGGAAAGTTTGAAGACAACACTGTGACTTCGACACCTGCAATTATTGCAGAACCGCAAAT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G69 CCCGATTGAATCTGACAAAGCAAGAGCTATAACCGGCATATCGATTGAAAGTCAACCTGAGTTAGACGACAAAGGATTACCACCACTACAACCAATTCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B CCCGATTGAATCTGACAAAGCAAGAGCTATAACCGGCATATCGATTGAAAGTCAACCTGAGTTAGACGACAAAGGATTACCACCACTACAACCAATTCTT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G69 CCAATGGTACAAGGCGAACAAGCTAATGAATGTCCTGCAACTAGTGATGGGCTAGGCCAAAGTAATGACCTGGTTATTGAAGGTGGAACCATTAGCATCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B CCAATGGTACAAGGCGAACAAGCTAATGAATGTCCTGCAACTAGTGATGGGCTAGGCCAAAGTAATGACCTGGTTATTGAAGGTGGAACCATTAGCATCT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G69 CTAGTGCCTACTCGCATGAGTTATTGAGCTCATTAACACAAGCACTCCAGAATGCAGGCATTGATCTGTCGCAAGCAAAGCTTTCTGTGCAGATCGATCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B CTAGTGCCTACTCGCATGAGTTATTGAGCTCATTAACACAAGCACTCCAGAATGCAGGCATTGATCTGTCGCAAGCAAAGCTTTCTGTGCAGATCGATCT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G69 TGGGAAGCGAGCCAATCAAGGTCTAACTCATGAAGAGCCATCAAGTAAGAATCCATTATCATATGATACGCAAGGAAGGGATTCAAGCGTTGAGGAAGAA ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TGGGAAGCGAGCCAATCAAGGTCTAACCCATGAAGAGCCATCAAGTAAGAATCCATTATCATATGATACGCAAGGAAGGGATTCAAGCGTTGAGGAAGAA 810 820 830 840 850 860 870 880 890 900 910 920 930 AT1G69 TCTGAACATTCTCACAAGCGGATGAAAACACTG ::::::::::::::::::::::::::::::::: RE_04B TCTGAACATTCTCACAAGCGGATGAAAACACTG 910 920 930 10 20 30 40 50 60 70 80 90 100 AT1G69 MRTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: RE_04B MRTGKGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILGELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G69 KYEGSYPGWSQEPTKLTPWRNNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGISIESQPELDDKGLPPLQPIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B KYEGSYPGWSQEPTKLTPWRNNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAITGISIESQPELDDKGLPPLQPIL 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G69 PMVQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSKNPLSYDTQGRDSSVEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B PMVQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQIDLGKRANQGLTHEEPSSKNPLSYDTQGRDSSVEEE 210 220 230 240 250 260 270 280 290 300 310 AT1G69 SEHSHKRMKTL ::::::::::: RE_04B SEHSHKRMKTL 310

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