◆◆◆RE_04B05 detail◆◆◆

Code name	RE_04B05
Locus	AT3G23210
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_04B05_960bp ATGTATCCATCAATCGAAGACGATGATGATCTTCTCGCTGCTCTTTGTTTTGATCAAAGCAATGGAGTAGAAGATCCTTATGGATATATGCAAACAAATG AAGATAACATATTTCAGGATTTTGGGTCTTGTGGTGTGAATCTGATGCAGCCACAACAAGAACAATTTGATTCTTTTAATGGAAATCTTGAGCAAGTTTG TAGTAGCTTTAGAGGAGGAAACAATGGAGTTGTTTATAGTAGTAGCATTGGATCAGCACAATTGGATTTGGCTGCATCGTTTAGTGGAGTTTTGCAGCAA GAGACACATCAAGTCTGTGGCTTTAGAGGACAAAACGACGATTCTGCAGTGCCTCATTTGCAGCAGCAACAAGGACAGGTGTTTAGTGGTGTAGTGGAAA TCAATTCTTCGTCATCTGTTGGAGCTCTTAAGGAAGAGTTTGAGGAAGAATGTTCGGGGAAGAGGAGACGAACTGGATCATGTAGCAAGCCAGGAACCAA AGCCTGTCGCGAGAAACTAAGAAGGGAAAAGCTAAATGACAAGTTCATGGACTTGAGCTCTGTTTTAGAGCCTGGCAGGACTCCAAAGACGGATAAATCA GCTATACTCGACGATGCAATCCGGGTTGTGAATCAGCTTAGAGGTGAAGCTCATGAGCTTCAAGAAACCAACCAAAAGCTTCTAGAAGAGATCAAGAGTC TAAAGGCGGATAAAAACGAGCTACGAGAGGAAAAGCTGGTGTTGAAGGCGGAGAAGGAGAAGATGGAGCAACAGTTAAAATCTATGGTGGTTCCATCACC AGGTTTCATGCCCTCCCAGCATCCAGCGGCTTTCCATTCCCATAAGATGGCGGTGGCTTACCCTTACGGCTACTATCCTCCAAACATGCCAATGTGGTCA CCCTTACCTCCTGCTGACCGTGATACGTCTCGTGATCTCAAAAATCTTCCTCCTGTTGCT >RE_04B05_translated MYPSIEDDDDLLAALCFDQSNGVEDPYGYMQTNEDNIFQDFGSCGVNLMQPQQEQFDSFNGNLEQVCSSFRGGNNGVVYSSSIGSAQLDLAASFSGVLQQ ETHQVCGFRGQNDDSAVPHLQQQQGQVFSGVVEINSSSSVGALKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKS AILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAVAYPYGYYPPNMPMWS PLPPADRDTSRDLKNLPPVA
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 958/960 (99.8%)（アミノ酸配列で319/320 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G23 ATGTATCCATCAATCGAAGACGATGATGATCTTCTCGCTGCTCTTTGTTTTGATCAAAGCAATGGAGTAGAAGATCCTTATGGATATATGCAAACAAATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B ATGTATCCATCAATCGAAGACGATGATGATCTTCTCGCTGCTCTTTGTTTTGATCAAAGCAATGGAGTAGAAGATCCTTATGGATATATGCAAACAAATG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G23 AAGATAACATATTTCAGGATTTTGGGTCTTGTGGTGTGAATCTGATGCAGCCACAACAAGAACAATTTGATTCTTTTAATGGAAATCTTGAGCAAGTTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B AAGATAACATATTTCAGGATTTTGGGTCTTGTGGTGTGAATCTGATGCAGCCACAACAAGAACAATTTGATTCTTTTAATGGAAATCTTGAGCAAGTTTG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G23 TAGTAGCTTTAGAGGAGGAAACAATGGAGTTGTTTATAGTAGTAGCATTGGATCAGCACAATTGGATTTGGCTGCATCGTTTAGTGGAGTTTTGCAGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TAGTAGCTTTAGAGGAGGAAACAATGGAGTTGTTTATAGTAGTAGCATTGGATCAGCACAATTGGATTTGGCTGCATCGTTTAGTGGAGTTTTGCAGCAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G23 GAGACACATCAAGTCTGTGGCTTTAGAGGACAAAACGACGATTCTGCAGTGCCTCATTTGCAGCAGCAACAAGGACAGGTGTTTAGTGGTGTAGTGGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B GAGACACATCAAGTCTGTGGCTTTAGAGGACAAAACGACGATTCTGCAGTGCCTCATTTGCAGCAGCAACAAGGACAGGTGTTTAGTGGTGTAGTGGAAA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G23 TCAATTCTTCGTCATCTGTTGGAGCTGTTAAGGAAGAGTTTGAGGAAGAATGTTCGGGGAAGAGGAGACGAACTGGATCATGTAGCAAGCCAGGAACCAA :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TCAATTCTTCGTCATCTGTTGGAGCTCTTAAGGAAGAGTTTGAGGAAGAATGTTCGGGGAAGAGGAGACGAACTGGATCATGTAGCAAGCCAGGAACCAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G23 AGCCTGTCGCGAGAAACTAAGAAGGGAAAAGCTAAATGACAAGTTCATGGACTTGAGCTCTGTTTTAGAGCCTGGCAGGACTCCAAAGACGGATAAATCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B AGCCTGTCGCGAGAAACTAAGAAGGGAAAAGCTAAATGACAAGTTCATGGACTTGAGCTCTGTTTTAGAGCCTGGCAGGACTCCAAAGACGGATAAATCA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G23 GCTATACTCGACGATGCAATCCGGGTTGTGAATCAGCTTAGAGGTGAAGCTCATGAGCTTCAAGAAACCAACCAAAAGCTTCTAGAAGAGATCAAGAGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B GCTATACTCGACGATGCAATCCGGGTTGTGAATCAGCTTAGAGGTGAAGCTCATGAGCTTCAAGAAACCAACCAAAAGCTTCTAGAAGAGATCAAGAGTC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G23 TAAAGGCGGATAAAAACGAGCTACGAGAGGAAAAGCTGGTGTTGAAGGCGGAGAAGGAGAAGATGGAGCAACAGTTAAAATCTATGGTGGTTCCATCACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TAAAGGCGGATAAAAACGAGCTACGAGAGGAAAAGCTGGTGTTGAAGGCGGAGAAGGAGAAGATGGAGCAACAGTTAAAATCTATGGTGGTTCCATCACC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G23 AGGTTTCATGCCCTCCCAGCATCCAGCAGCTTTCCATTCCCATAAGATGGCGGTGGCTTACCCTTACGGCTACTATCCTCCAAACATGCCAATGTGGTCA ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B AGGTTTCATGCCCTCCCAGCATCCAGCGGCTTTCCATTCCCATAAGATGGCGGTGGCTTACCCTTACGGCTACTATCCTCCAAACATGCCAATGTGGTCA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 AT3G23 CCCTTACCTCCTGCTGACCGTGATACGTCTCGTGATCTCAAAAATCTTCCTCCTGTTGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B CCCTTACCTCCTGCTGACCGTGATACGTCTCGTGATCTCAAAAATCTTCCTCCTGTTGCT 910 920 930 940 950 960 10 20 30 40 50 60 70 80 90 100 AT3G23 MYPSIEDDDDLLAALCFDQSNGVEDPYGYMQTNEDNIFQDFGSCGVNLMQPQQEQFDSFNGNLEQVCSSFRGGNNGVVYSSSIGSAQLDLAASFSGVLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B MYPSIEDDDDLLAALCFDQSNGVEDPYGYMQTNEDNIFQDFGSCGVNLMQPQQEQFDSFNGNLEQVCSSFRGGNNGVVYSSSIGSAQLDLAASFSGVLQQ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G23 ETHQVCGFRGQNDDSAVPHLQQQQGQVFSGVVEINSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKS ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B ETHQVCGFRGQNDDSAVPHLQQQQGQVFSGVVEINSSSSVGALKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G23 AILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAVAYPYGYYPPNMPMWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B AILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHSHKMAVAYPYGYYPPNMPMWS 210 220 230 240 250 260 270 280 290 300 310 320 AT3G23 PLPPADRDTSRDLKNLPPVA :::::::::::::::::::: RE_04B PLPPADRDTSRDLKNLPPVA 310 320

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