| Code name | RE_04B06 | |||
|---|---|---|---|---|
| Locus | AT4G14410 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列99.60%一致 | |||
| comment | ||||
| sequence |
>RE_04B06_849bp ATGTATCCTTCTCTCGACGATGATTTCGTCTCTGATTTGTTTTGCTTCGATCAAAGCAATGGAGCAGAACTTGATGATTACACACAGTTTGGTGTAAATT TGCAGACTGATCAAGAGGATACCTTTCCAGATTTTGTGTCATATGGTGTGAATTTGCAGCAGGAGCCAGATGAAGTCTTTAGTATTGGAGCTTCTCAATT GGATTTGTCCTCGTATAATGGAGTTTTGTCGCTAGAGCCAGAACAGGTGGGGCAACAAGAGTGTGAAGTTGTGCAGGAAGAAGAAGTAGAGATCAATTCT GGTTCATCTGGTGGAGCTGTTAAGGAAGAACAGGAACATTTAGATGACGATTGCTCCAGAAAGCGGGCAAGGACTGGATCGTGTAGCAGAGGAGGAGGAA CTAAAGCGTGTCGTGAAAGGTTGAGGAGGGAGAAGCTAAATGAGAGGTTTATGGATTTGAGCTCGGTTTTGGAGCCTGGGAGGACTCCTAAGACTGATAA ACCGGCTATACTCGATGATGCAATCCGTATATTGAATCAACTTAGAGATGAAGCTCTTAAGCTTGAAGAAACTAACCAGAAGCTTTTAGAGGAGATCAAG AGTCTCAAGGCGGAGAAGAACGAGCTGAGGGAGGAAAAGCTGGTGTTGAAGGCGGATAAAGAGAAGACAGAACAACAGTTAAAGTCTATGACGGCTCCAT CTTCAGGGTTCATACCTCATATTCCGGCTGCATTTAACCACAACAAAATGGCTGTTTATCCAAGTTACGGTTACATGCCAATGTGGCATTATATGCCTCA ATCCGTTCGTGACACATCTCGTGATCAAGAACTCAGGCCTCCTGCTGCT >RE_04B06_translated MYPSLDDDFVSDLFCFDQSNGAELDDYTQFGVNLQTDQEDTFPDFVSYGVNLQQEPDEVFSIGASQLDLSSYNGVLSLEPEQVGQQECEVVQEEEVEINS GSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIK SLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFNHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 847/849 (99.8%)（アミノ酸配列で282/283 (99.6%)）一致しました。
10 20 30 40 50 60 70 80 90 100
AT4G14 ATGTATCCTTCTCTCGACGATGATTTCGTCTCTGATTTGTTTTGCTTCGATCAAAGCAATGGAGCAGAACTTGATGATTACACACAGTTTGGTGTAAATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B ATGTATCCTTCTCTCGACGATGATTTCGTCTCTGATTTGTTTTGCTTCGATCAAAGCAATGGAGCAGAACTTGATGATTACACACAGTTTGGTGTAAATT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT4G14 TGCAGACTGATCAAGAGGATACCTTTCCAGATTTTGTGTCATATGGTGTGAATTTGCAGCAGGAGCCAGATGAAGTCTTTAGTATTGGAGCTTCTCAATT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B TGCAGACTGATCAAGAGGATACCTTTCCAGATTTTGTGTCATATGGTGTGAATTTGCAGCAGGAGCCAGATGAAGTCTTTAGTATTGGAGCTTCTCAATT
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT4G14 GGATTTGTCCTCGTATAATGGAGTTTTGTCGCTAGAGCCAGAACAGGTGGGGCAACAAGATTGTGAAGTTGTGCAGGAAGAAGAAGTAGAGATCAATTCT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
RE_04B GGATTTGTCCTCGTATAATGGAGTTTTGTCGCTAGAGCCAGAACAGGTGGGGCAACAAGAGTGTGAAGTTGTGCAGGAAGAAGAAGTAGAGATCAATTCT
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT4G14 GGTTCATCTGGTGGAGCTGTTAAGGAAGAACAGGAACATTTAGATGACGATTGCTCCAGAAAGCGGGCAAGGACTGGATCGTGTAGCAGAGGAGGAGGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B GGTTCATCTGGTGGAGCTGTTAAGGAAGAACAGGAACATTTAGATGACGATTGCTCCAGAAAGCGGGCAAGGACTGGATCGTGTAGCAGAGGAGGAGGAA
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480 490 500
AT4G14 CTAAAGCGTGTCGTGAAAGGTTGAGGAGGGAGAAGCTAAATGAGAGGTTTATGGATTTGAGCTCGGTTTTGGAGCCTGGGAGGACTCCTAAGACTGATAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B CTAAAGCGTGTCGTGAAAGGTTGAGGAGGGAGAAGCTAAATGAGAGGTTTATGGATTTGAGCTCGGTTTTGGAGCCTGGGAGGACTCCTAAGACTGATAA
410 420 430 440 450 460 470 480 490 500
510 520 530 540 550 560 570 580 590 600
AT4G14 ACCGGCTATACTCGATGATGCAATCCGTATATTGAATCAACTTAGAGATGAAGCTCTTAAGCTTGAAGAAACTAACCAGAAGCTTTTAGAGGAGATCAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B ACCGGCTATACTCGATGATGCAATCCGTATATTGAATCAACTTAGAGATGAAGCTCTTAAGCTTGAAGAAACTAACCAGAAGCTTTTAGAGGAGATCAAG
510 520 530 540 550 560 570 580 590 600
610 620 630 640 650 660 670 680 690 700
AT4G14 AGTCTCAAGGCGGAGAAGAACGAGCTGAGGGAGGAAAAGCTGGTGTTGAAGGCGGATAAAGAGAAGACAGAACAACAGTTAAAGTCTATGACGGCTCCAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B AGTCTCAAGGCGGAGAAGAACGAGCTGAGGGAGGAAAAGCTGGTGTTGAAGGCGGATAAAGAGAAGACAGAACAACAGTTAAAGTCTATGACGGCTCCAT
610 620 630 640 650 660 670 680 690 700
710 720 730 740 750 760 770 780 790 800
AT4G14 CTTCAGGGTTCATACCTCATATTCCAGCTGCATTTAACCACAACAAAATGGCTGTTTATCCAAGTTACGGTTACATGCCAATGTGGCATTATATGCCTCA
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B CTTCAGGGTTCATACCTCATATTCCGGCTGCATTTAACCACAACAAAATGGCTGTTTATCCAAGTTACGGTTACATGCCAATGTGGCATTATATGCCTCA
710 720 730 740 750 760 770 780 790 800
810 820 830 840
AT4G14 ATCCGTTCGTGACACATCTCGTGATCAAGAACTCAGGCCTCCTGCTGCT
:::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B ATCCGTTCGTGACACATCTCGTGATCAAGAACTCAGGCCTCCTGCTGCT
810 820 830 840
10 20 30 40 50 60 70 80 90 100
AT4G14 MYPSLDDDFVSDLFCFDQSNGAELDDYTQFGVNLQTDQEDTFPDFVSYGVNLQQEPDEVFSIGASQLDLSSYNGVLSLEPEQVGQQDCEVVQEEEVEINS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
RE_04B MYPSLDDDFVSDLFCFDQSNGAELDDYTQFGVNLQTDQEDTFPDFVSYGVNLQQEPDEVFSIGASQLDLSSYNGVLSLEPEQVGQQECEVVQEEEVEINS
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT4G14 GSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B GSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIK
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280
AT4G14 SLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFNHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_04B SLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFNHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA
210 220 230 240 250 260 270 280
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