◆◆◆RE_04B08 detail◆◆◆

Code name	RE_04B08
Locus	AT4G00950
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment
sequence	>RE_04B08_873bp ATGGAAGCTGAGAAAGAAACAGAACAAGAAGGAAACTTGACAGTAATGAAACTTCCGGTGTTACCAACTAAACCCAACACTCACAGCCACTCTATGTCAT CACCAATTCACAGTTCCATATCAGCTTCAGTTCCCTTTAGCTGGGAAGAAGAGCCTGGCAAGCCCAAGCAACACTCTACTTCTTCTTCCTCCTCTTCCTC TTCCTCACCATTAACTTCTTATTCTTCATCTCCTTTTGAAACTCACAAGTCCTTAGAGCTACCACCAAGGCTTCACTTACTTGAAAAAGATGGAGGATCA GTAACCAAACTTCACTCGCCTATAACAGTCTTTGATGGACCTTATAGCATGACGACATCAAAAAGGATGGATTCACCTTCCTTTAGGATGATGGTGAAAG GTAGTGCTGATTGTTATGGGTCTTTCAGGAGTGATATCGATGGTGATTTAGAGGATTTGGAAGTGGGCTCTAAGCAGCAGGAGAACTTGAGTAGTGGCTC TTTGGCTGTTGTGAAGAAGAGAGGGAGATTAGGGTTTTTTGGGTTTAGGAGGAGGAGAGCATTGAAAGGGAAAACAGAGTTTGGTAGAGGTAGTTATGTG TTCCCATCTTCTGTAGACGGAGAGAGTGAATACAGTAGAAAGGAAGAGGAAGAAGAAAAAGAAGACAAAAGGTTTGGTTATGATGATACTGATGGTATTA GTTGCAGCCAAAGCAGCAGGTTTTGTGATGTGAAGATCTCAAGCATTAGTAGAACAGGCAGCTTCTCTACTCTGCCTGCACCACCTTCTTCTTCTTCAAA GTCTCACTTCTGGACGAATGTGTATGCAGGACTAAAGCAAGTGGTTCCATGGAAGAGCAAGAAGACTACAGTT >RE_04B08_translated MEAEKETEQEGNLTVMKLPVLPTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTSSSSSSSSSPLTSYSSSPFETHKSLELPPRLHLLEKDGGS VTKLHSPITVFDGPYSMTTSKRMDSPSFRMMVKGSADCYGSFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRLGFFGFRRRRALKGKTEFGRGSYV FPSSVDGESEYSRKEEEEEKEDKRFGYDDTDGISCSQSSRFCDVKISSISRTGSFSTLPAPPSSSSKSHFWTNVYAGLKQVVPWKSKKTTV
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 871/873 (99.8%)（アミノ酸配列で290/291 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G00 ATGGAAGCTGAGAAAGAAACAGAACAAGAAGGAAACTTGACAGTAATGAAACTTCCGGTGTTACCAACTAAACCCAACACTCACAGCCACTCTATGTCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B ATGGAAGCTGAGAAAGAAACAGAACAAGAAGGAAACTTGACAGTAATGAAACTTCCGGTGTTACCAACTAAACCCAACACTCACAGCCACTCTATGTCAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G00 CACCAATTCACAGTTCCATATCAGCTTCAGTTCCCTTTAGCTGGGAAGAAGAGCCTGGCAAGCCCAAGCAACACTCTACTTCTTCTTCCTCCTCTTCCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B CACCAATTCACAGTTCCATATCAGCTTCAGTTCCCTTTAGCTGGGAAGAAGAGCCTGGCAAGCCCAAGCAACACTCTACTTCTTCTTCCTCCTCTTCCTC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G00 TTCCTCACCATTAACTTCTTATTCTTCATCTCCTTTTGAAACTCACAAGTCCTTAGAGCTACCACCAAGGCTTCACTTACTTGAAAAAGATGGAGGATCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TTCCTCACCATTAACTTCTTATTCTTCATCTCCTTTTGAAACTCACAAGTCCTTAGAGCTACCACCAAGGCTTCACTTACTTGAAAAAGATGGAGGATCA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G00 GTAACCAAACTTCACTCGCCTATAACAGTCTTTGATGGACCTTATAGCATGACGACATCAAAAAGGATGGATTCACCTTCCTTTAGGATGATGGTGAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B GTAACCAAACTTCACTCGCCTATAACAGTCTTTGATGGACCTTATAGCATGACGACATCAAAAAGGATGGATTCACCTTCCTTTAGGATGATGGTGAAAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G00 GTAGTGCTGATTGTTATGGGTCTTTCAGGAGTGATATCGATGGTGATTTAGAGGATTTGGAAGTGGGCTCTAAGCAGCAGGAGAACTTGAGTAGTGGCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B GTAGTGCTGATTGTTATGGGTCTTTCAGGAGTGATATCGATGGTGATTTAGAGGATTTGGAAGTGGGCTCTAAGCAGCAGGAGAACTTGAGTAGTGGCTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G00 TTTGGCTGTTGTGAAGAAGAGAGGGAGATTAGGGTTTTTTGGGTTTAGGAGGAGGAGAGCATTGAAAGGGAAAACAGAGTTTGGTAGAGGTAGTTATGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TTTGGCTGTTGTGAAGAAGAGAGGGAGATTAGGGTTTTTTGGGTTTAGGAGGAGGAGAGCATTGAAAGGGAAAACAGAGTTTGGTAGAGGTAGTTATGTG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G00 TTCCCATCTTCTGTAGACAGAGAGAGTGAATACAGTAGAAAGGAAGAGGAAGAAGAAAAAGAAGACAAAAGGTTTGGTTATGATGATACTGATGGTATTA :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B TTCCCATCTTCTGTAGACGGAGAGAGTGAATACAGTAGAAAGGAAGAGGAAGAAGAAAAAGAAGACAAAAGGTTTGGTTATGATGATACTGATGGTATTA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G00 GTTGCAGCCAAAGCAGCAGGTTTTGTGATGTGAAGATCTCAAGCATTAGTAGAACAGGCAGCTTCTCTACTCTGCCTGCACCACCTTCTTCTTCTTCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B GTTGCAGCCAAAGCAGCAGGTTTTGTGATGTGAAGATCTCAAGCATTAGTAGAACAGGCAGCTTCTCTACTCTGCCTGCACCACCTTCTTCTTCTTCAAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 AT4G00 GTCTCACTTTTGGACGAATGTGTATGCAGGACTAAAGCAAGTGGTTCCATGGAAGAGCAAGAAGACTACAGTT ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B GTCTCACTTCTGGACGAATGTGTATGCAGGACTAAAGCAAGTGGTTCCATGGAAGAGCAAGAAGACTACAGTT 810 820 830 840 850 860 870 10 20 30 40 50 60 70 80 90 100 AT4G00 MEAEKETEQEGNLTVMKLPVLPTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTSSSSSSSSSPLTSYSSSPFETHKSLELPPRLHLLEKDGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B MEAEKETEQEGNLTVMKLPVLPTKPNTHSHSMSSPIHSSISASVPFSWEEEPGKPKQHSTSSSSSSSSSPLTSYSSSPFETHKSLELPPRLHLLEKDGGS 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G00 VTKLHSPITVFDGPYSMTTSKRMDSPSFRMMVKGSADCYGSFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRLGFFGFRRRRALKGKTEFGRGSYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B VTKLHSPITVFDGPYSMTTSKRMDSPSFRMMVKGSADCYGSFRSDIDGDLEDLEVGSKQQENLSSGSLAVVKKRGRLGFFGFRRRRALKGKTEFGRGSYV 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT4G00 FPSSVDRESEYSRKEEEEEKEDKRFGYDDTDGISCSQSSRFCDVKISSISRTGSFSTLPAPPSSSSKSHFWTNVYAGLKQVVPWKSKKTTV :::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_04B FPSSVDGESEYSRKEEEEEKEDKRFGYDDTDGISCSQSSRFCDVKISSISRTGSFSTLPAPPSSSSKSHFWTNVYAGLKQVVPWKSKKTTV 210 220 230 240 250 260 270 280 290

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