◆◆◆RE_0521 detail◆◆◆

Code name	RE_0521
Locus	AT1G23380
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0521_987bp ATGGATGGAATGTACAATTTCCATTCGGCCGGTGATTATTCAGATAAGTCGGTTCTGATGATGTCACCGGAGAGTCTCATGTTTCCTTCCGATTACCAAG CTTTGCTATGTTCCTCCGCCGGTGAAAATCGTGTCTCTGATGTTTTCGGATCCGACGAGCTACTCTCAGTAGCCGTCTCCGCTTTGTCGTCGGAGGCGGC TTCGATCGCTCCGGAGATCCGAAGAAATGATGATAACGTTTCTCTAACTGTCATCAAAGCTAAAATCGCTTGTCATCCTTCGTATCCTCGCTTACTTCAA GCTTACATCGATTGCCAAAAGAAACAGGTCGGAGCACCACCGGAGATAGCGTGTTTACTAGAGGAGATTCAACGGGAGAGTGATGTTTATAAGCAAGAGG TTGTTCCTTCTTCTTGCTTTGGAGCTGATCCTGAGCTTGATGAATTTATGGAAACGTACTGCGATATATTAGTGAAATACAAATCGGATCTAGCAAGACC GTTTGACGAGGCAACGTGTTTCTTGAACAAGATTGAGATGCAGCTACGGAACCTATGTACTGGTGTCGAGTCTGCCAGGGGAGTTTCTGAGGATGGTGTA ATATCATCTGACGAGGAACTGAGTGGAGGTGATCATGAGGTAGCAGAGGATGGGAGACAAAGATGTGAAGACCGGGACCTCAAAGATAGGTTGCTACGCA AATTTGGAAGCCGTATTAGTACTTTAAAGCTTGAGTTCTCAAAGAAGAAGAAGAAAGGAAAGTTACCAAGAGAAGCAAGACAAGCTCTTCTTGATTGGTG GAATCTCCATTATAAGTGGCCTTACCCTACTGAAGGAGATAAGATAGCATTAGCTGATGCAACGGGGTTAGACCAAAAACAAATCAACAATTGGTTTATA AACCAAAGGAAACGTCATTGGAAGCCATCAGAGAATATGCCTTTCGCTATGATGGATGATTCTAGTGGATCATTCTTTACCGAGGAA >RE_0521_translated MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQ AYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGV ISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFI NQRKRHWKPSENMPFAMMDDSSGSFFTEE
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 981/987 (99.4%)（アミノ酸配列で327/329 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G23 ATGGATGGAATGTACAATTTCCATTCGGCCGGTGATTATTCAGATAAGTCGGTTCTGATGATGTCACCGGAGAGTCTCATGTTTCCTTCCGATTACCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 ATGGATGGAATGTACAATTTCCATTCGGCCGGTGATTATTCAGATAAGTCGGTTCTGATGATGTCACCGGAGAGTCTCATGTTTCCTTCCGATTACCAAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G23 CTTTGCTATGTTCCTCCGCCGGTGAAAATCGTGTCTCTGATGTTTTCGGATCCGACGAGCTACTCTCAGTAGCCGTCTCCGCTTTGTCGTCGGAGGCGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 CTTTGCTATGTTCCTCCGCCGGTGAAAATCGTGTCTCTGATGTTTTCGGATCCGACGAGCTACTCTCAGTAGCCGTCTCCGCTTTGTCGTCGGAGGCGGC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G23 TTCGATCGCTCCGGAGATCCGAAGAAATGATGATAACGTTTCTCTAACTGTCATCAAAGCTAAAATCGCTTGTCATCCTTCGTATCCTCGCTTACTTCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 TTCGATCGCTCCGGAGATCCGAAGAAATGATGATAACGTTTCTCTAACTGTCATCAAAGCTAAAATCGCTTGTCATCCTTCGTATCCTCGCTTACTTCAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G23 GCTTACATCGATTGCCAAA------AGGTCGGAGCACCACCGGAGATAGCGTGTTTACTAGAGGAGATTCAACGGGAGAGTGATGTTTATAAGCAAGAGG ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 GCTTACATCGATTGCCAAAAGAAACAGGTCGGAGCACCACCGGAGATAGCGTGTTTACTAGAGGAGATTCAACGGGAGAGTGATGTTTATAAGCAAGAGG 310 320 330 340 350 360 370 380 390 400 400 410 420 430 440 450 460 470 480 490 AT1G23 TTGTTCCTTCTTCTTGCTTTGGAGCTGATCCTGAGCTTGATGAATTTATGGAAACGTACTGCGATATATTAGTGAAATACAAATCGGATCTAGCAAGACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 TTGTTCCTTCTTCTTGCTTTGGAGCTGATCCTGAGCTTGATGAATTTATGGAAACGTACTGCGATATATTAGTGAAATACAAATCGGATCTAGCAAGACC 410 420 430 440 450 460 470 480 490 500 500 510 520 530 540 550 560 570 580 590 AT1G23 GTTTGACGAGGCAACGTGTTTCTTGAACAAGATTGAGATGCAGCTACGGAACCTATGTACTGGTGTCGAGTCTGCCAGGGGAGTTTCTGAGGATGGTGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 GTTTGACGAGGCAACGTGTTTCTTGAACAAGATTGAGATGCAGCTACGGAACCTATGTACTGGTGTCGAGTCTGCCAGGGGAGTTTCTGAGGATGGTGTA 510 520 530 540 550 560 570 580 590 600 600 610 620 630 640 650 660 670 680 690 AT1G23 ATATCATCTGACGAGGAACTGAGTGGAGGTGATCATGAGGTAGCAGAGGATGGGAGACAAAGATGTGAAGACCGGGACCTCAAAGATAGGTTGCTACGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 ATATCATCTGACGAGGAACTGAGTGGAGGTGATCATGAGGTAGCAGAGGATGGGAGACAAAGATGTGAAGACCGGGACCTCAAAGATAGGTTGCTACGCA 610 620 630 640 650 660 670 680 690 700 700 710 720 730 740 750 760 770 780 790 AT1G23 AATTTGGAAGCCGTATTAGTACTTTAAAGCTTGAGTTCTCAAAGAAGAAGAAGAAAGGAAAGTTACCAAGAGAAGCAAGACAAGCTCTTCTTGATTGGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 AATTTGGAAGCCGTATTAGTACTTTAAAGCTTGAGTTCTCAAAGAAGAAGAAGAAAGGAAAGTTACCAAGAGAAGCAAGACAAGCTCTTCTTGATTGGTG 710 720 730 740 750 760 770 780 790 800 800 810 820 830 840 850 860 870 880 890 AT1G23 GAATCTCCATTATAAGTGGCCTTACCCTACTGAAGGAGATAAGATAGCATTAGCTGATGCAACGGGGTTAGACCAAAAACAAATCAACAATTGGTTTATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 GAATCTCCATTATAAGTGGCCTTACCCTACTGAAGGAGATAAGATAGCATTAGCTGATGCAACGGGGTTAGACCAAAAACAAATCAACAATTGGTTTATA 810 820 830 840 850 860 870 880 890 900 900 910 920 930 940 950 960 970 980 AT1G23 AACCAAAGGAAACGTCATTGGAAGCCATCAGAGAATATGCCTTTCGCTATGATGGATGATTCTAGTGGATCATTCTTTACCGAGGAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 AACCAAAGGAAACGTCATTGGAAGCCATCAGAGAATATGCCTTTCGCTATGATGGATGATTCTAGTGGATCATTCTTTACCGAGGAA 910 920 930 940 950 960 970 980 10 20 30 40 50 60 70 80 90 100 AT1G23 MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 AT1G23 AYIDCQK--VGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGV ::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 AYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGV 110 120 130 140 150 160 170 180 190 200 200 210 220 230 240 250 260 270 280 290 AT1G23 ISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 ISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFI 210 220 230 240 250 260 270 280 290 300 300 310 320 AT1G23 NQRKRHWKPSENMPFAMMDDSSGSFFTEE ::::::::::::::::::::::::::::: RE_052 NQRKRHWKPSENMPFAMMDDSSGSFFTEE 310 320

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