◆◆◆RE_0528 detail◆◆◆

Code name	RE_0528
Locus	AT1G62990
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0420_アミノ酸配列100%一致
sequence	>RE_0528_873bp ATGCAAGAAGCGGCACTAGGTATGATGGGAGCCACCGTAGGCGGAGACGGAGACACCGCGGTCGTGGCGGAGCAGAATAGACAGTTGAAAGGTGAGATAG CGACACATCCCATGTATGAGCAATTATTAGCCGCACACGTGGCGTGTTTAAGAGTAGCTACTCCAATAGATCAACTTCCGATCATTGAAGCTCAGCTTTC TCAATCTCATCATCTTCTCCGTTCTTACGCTTCCACGGCCGTTGGATACCATCATGATCGTCACGAGCTCGATAATTTCTTGGCACAATATGTAATGGTG TTGTGTAGCTTCAAAGAACAGCTGCAACAGCACGTGAGGGTTCATGCCGTCGAAGCTGTTATGGCTTGCCGTGAAATTGAGAACAACCTTCATTCTCTTA CAGGAGCAACTTTAGGAGAAGGGTCGGGTGCGACTATGTCGGAGGATGAGGATGATCTTCCGATGGATTTCTCGTCAGATAATTCCGGCGTTGATTTTAG CGGCGGCCACGATATGACGGGATTTGGTCCGTTGCTACCGACTGAATCGGAAAGATCCCTTATGGAAAGAGTCAGACAAGAACTCAAACTAGAACTCAAA CAGGGTTTTAAATCGAGAATCGAAGATGTAAGAGAAGAGATAATGAGGAAGAGAAGGGCTGGGAAATTGCCAGGAGACACAACTACTGTCTTGAAAAATT GGTGGCAACAACATTGCAAATGGCCTTACCCTACGGAAGATGACAAGGCAAAATTGGTGGAGGAGACAGGATTGCAGTTGAAGCAAATCAACAATTGGTT CATTAACCAACGCAAGAGGAATTGGCACAACAACTCTCACTCCCTCACTTCCTTGAAGTCCAAGCGCAAACAC >RE_0528_translated MQEAALGMMGATVGGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRHELDNFLAQYVMV LCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELK QGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRKH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 872/873 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G62 ATGCAAGAAGCGGCACTAGGTATGATGGGAGCCACCGTAGGCGGAGACGGAGACACCGCGGTCGTGGCGGAGCAGAATAGACAGTTGAAAGGTGAGATAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 ATGCAAGAAGCGGCACTAGGTATGATGGGAGCCACCGTAGGCGGAGACGGAGACACCGCGGTCGTGGCGGAGCAGAATAGACAGTTGAAAGGTGAGATAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G62 CGACACATCCGATGTATGAGCAATTATTAGCCGCACACGTGGCGTGTTTAAGAGTAGCTACTCCAATAGATCAACTTCCGATCATTGAAGCTCAGCTTTC :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 CGACACATCCCATGTATGAGCAATTATTAGCCGCACACGTGGCGTGTTTAAGAGTAGCTACTCCAATAGATCAACTTCCGATCATTGAAGCTCAGCTTTC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G62 TCAATCTCATCATCTTCTCCGTTCTTACGCTTCCACGGCCGTTGGATACCATCATGATCGTCACGAGCTCGATAATTTCTTGGCACAATATGTAATGGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 TCAATCTCATCATCTTCTCCGTTCTTACGCTTCCACGGCCGTTGGATACCATCATGATCGTCACGAGCTCGATAATTTCTTGGCACAATATGTAATGGTG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G62 TTGTGTAGCTTCAAAGAACAGCTGCAACAGCACGTGAGGGTTCATGCCGTCGAAGCTGTTATGGCTTGCCGTGAAATTGAGAACAACCTTCATTCTCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 TTGTGTAGCTTCAAAGAACAGCTGCAACAGCACGTGAGGGTTCATGCCGTCGAAGCTGTTATGGCTTGCCGTGAAATTGAGAACAACCTTCATTCTCTTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G62 CAGGAGCAACTTTAGGAGAAGGGTCGGGTGCGACTATGTCGGAGGATGAGGATGATCTTCCGATGGATTTCTCGTCAGATAATTCCGGCGTTGATTTTAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 CAGGAGCAACTTTAGGAGAAGGGTCGGGTGCGACTATGTCGGAGGATGAGGATGATCTTCCGATGGATTTCTCGTCAGATAATTCCGGCGTTGATTTTAG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G62 CGGCGGCCACGATATGACGGGATTTGGTCCGTTGCTACCGACTGAATCGGAAAGATCCCTTATGGAAAGAGTCAGACAAGAACTCAAACTAGAACTCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 CGGCGGCCACGATATGACGGGATTTGGTCCGTTGCTACCGACTGAATCGGAAAGATCCCTTATGGAAAGAGTCAGACAAGAACTCAAACTAGAACTCAAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G62 CAGGGTTTTAAATCGAGAATCGAAGATGTAAGAGAAGAGATAATGAGGAAGAGAAGGGCTGGGAAATTGCCAGGAGACACAACTACTGTCTTGAAAAATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 CAGGGTTTTAAATCGAGAATCGAAGATGTAAGAGAAGAGATAATGAGGAAGAGAAGGGCTGGGAAATTGCCAGGAGACACAACTACTGTCTTGAAAAATT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G62 GGTGGCAACAACATTGCAAATGGCCTTACCCTACGGAAGATGACAAGGCAAAATTGGTGGAGGAGACAGGATTGCAGTTGAAGCAAATCAACAATTGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 GGTGGCAACAACATTGCAAATGGCCTTACCCTACGGAAGATGACAAGGCAAAATTGGTGGAGGAGACAGGATTGCAGTTGAAGCAAATCAACAATTGGTT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 AT1G62 CATTAACCAACGCAAGAGGAATTGGCACAACAACTCTCACTCCCTCACTTCCTTGAAGTCCAAGCGCAAACAC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 CATTAACCAACGCAAGAGGAATTGGCACAACAACTCTCACTCCCTCACTTCCTTGAAGTCCAAGCGCAAACAC 810 820 830 840 850 860 870 10 20 30 40 50 60 70 80 90 100 AT1G62 MQEAALGMMGATVGGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRHELDNFLAQYVMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 MQEAALGMMGATVGGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRHELDNFLAQYVMV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G62 LCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 LCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELK 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT1G62 QGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRKH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_052 QGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRKH 210 220 230 240 250 260 270 280 290

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