◆◆◆RE_0539 detail◆◆◆

Code name	RE_0539
Locus	AT2G22430
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.00%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0539_933bp ATGATGAAGAGATTAAGTAGTTCAGATTCAGTGGGTGGTCTCATCTCTTTATGTCCTACAACTTCCACAGATGAGCAGAGTCCGAGGAGATACGGTGGGA GAGAGTTTCAGTCGATGCTTGAAGGATACGAGGAAGAAGAAGAAGCTATAGTAGAAGAAAGAGGACACGTGGGCTTGTCGGAGAAGAAGAGAAGGTTAAG CATTAACCAAGTTAAAGCTTTGGAGAAGAATTTTGAGTTAGAGAGTAAGCTTGAGCCTGAGAGGAAAGTTAAGTTAGCTCAAGAACTTGGTCTTCAACCT CGTCAAGTTGCTGTTTGGTTTCAAAACCGTCGTGCTCGGTGGAAGACAAAACAGCTTGAGAAAGATTACGGTGTTCTTAAAACCCAGTACGATTCTCTCC GTCATAACTTTGATTCCCTCCGCCGTGACAATGAATCTCTCCTTCAAGAGATTAGTAAACTGGAAACGAAGCTTAATGGAGGAGGAGGAGAAGAAGAAGA AGAAGAGAACAACGCGGCGGTGACAACGGAGAGTGATATTTCGGTCAAGGAGGAAGAAGTTTCGTTGCCGGAGAAGATTACAGAGGCACCGTCGTCTCCT CCACAGTTTCTTGAACATTCTGATGGTCTTAATTACCGGAGTTTCACAGATCTACGTGATCTTCTTCCATTAAAGGCGGCGGCTTCTTCATTCGCCGCCG CAGCTGGATCTTCAGACAGTAGCGATTCAGGCGCTCTGCTGAATGAAGAAAGCAGCTCTAATGTCACTGTGGCGGCTCCGGTGACGGTTCCAGGAGGTAA TTTCTTCCAGTTTGTGAAAATGGAGCAGACGGAGGATCATGAGGACTTTCTGAGTGGAGAAGAAGCTTGTGAATTCTTTTCCGATGAACAACCGCCGTCT CTACACTGGTACTCCACCGTTGATCATTGGAAT >RE_0539_translated MMKRLSSSDSVGGLISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELESKLEPERKVKLAQELGLQP RQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLETKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSSP PQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSGALLNEESSSNVTVAAPVTVPGGNFFQFVKMEQTEDHEDFLSGEEACEFFSDEQPPS LHWYSTVDHWN
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 930/933 (99.7%)（アミノ酸配列で308/311 (99.0%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G22 ATGATGAAGAGATTAAGTAGTTCAGATTCAGTGGGTGGTCTCATCTCTTTATGTCCTACAACTTCCACAGATGAGCAGAGTCCGAGGAGATACGGTGGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 ATGATGAAGAGATTAAGTAGTTCAGATTCAGTGGGTGGTCTCATCTCTTTATGTCCTACAACTTCCACAGATGAGCAGAGTCCGAGGAGATACGGTGGGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G22 GAGAGTTTCAGTCGATGCTTGAAGGATACGAGGAAGAAGAAGAAGCTATAGTAGAAGAAAGAGGACACGTGGGCTTGTCGGAGAAGAAGAGAAGGTTAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 GAGAGTTTCAGTCGATGCTTGAAGGATACGAGGAAGAAGAAGAAGCTATAGTAGAAGAAAGAGGACACGTGGGCTTGTCGGAGAAGAAGAGAAGGTTAAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G22 CATTAACCAAGTTAAAGCTTTGGAGAAGAATTTTGAGTTAGAGAATAAGCTTGAGCCTGAGAGGAAAGTTAAGTTAGCTCAAGAACTTGGTCTTCAACCT :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 CATTAACCAAGTTAAAGCTTTGGAGAAGAATTTTGAGTTAGAGAGTAAGCTTGAGCCTGAGAGGAAAGTTAAGTTAGCTCAAGAACTTGGTCTTCAACCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G22 CGTCAAGTTGCTGTTTGGTTTCAAAACCGTCGTGCTCGGTGGAAGACAAAACAGCTTGAGAAAGATTACGGTGTTCTTAAAACCCAGTACGATTCTCTCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 CGTCAAGTTGCTGTTTGGTTTCAAAACCGTCGTGCTCGGTGGAAGACAAAACAGCTTGAGAAAGATTACGGTGTTCTTAAAACCCAGTACGATTCTCTCC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G22 GTCATAACTTTGATTCCCTCCGCCGTGACAATGAATCTCTCCTTCAAGAGATTAGTAAACTGAAAACGAAGCTTAATGGAGGAGGAGGAGAAGAAGAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: RE_053 GTCATAACTTTGATTCCCTCCGCCGTGACAATGAATCTCTCCTTCAAGAGATTAGTAAACTGGAAACGAAGCTTAATGGAGGAGGAGGAGAAGAAGAAGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G22 AGAAGAGAACAACGCGGCGGTGACAACGGAGAGTGATATTTCGGTCAAGGAGGAAGAAGTTTCGTTGCCGGAGAAGATTACAGAGGCACCGTCGTCTCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 AGAAGAGAACAACGCGGCGGTGACAACGGAGAGTGATATTTCGGTCAAGGAGGAAGAAGTTTCGTTGCCGGAGAAGATTACAGAGGCACCGTCGTCTCCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G22 CCACAGTTTCTTGAACATTCTGATGGTCTTAATTACCGGAGTTTCACAGATCTACGTGATCTTCTTCCATTAAAGGCGGCGGCTTCTTCATTCGCCGCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 CCACAGTTTCTTGAACATTCTGATGGTCTTAATTACCGGAGTTTCACAGATCTACGTGATCTTCTTCCATTAAAGGCGGCGGCTTCTTCATTCGCCGCCG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G22 CAGCTGGATCTTCAGACAGTAGCGATTCAAGCGCTCTGCTGAATGAAGAAAGCAGCTCTAATGTCACTGTGGCGGCTCCGGTGACGGTTCCAGGAGGTAA ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 CAGCTGGATCTTCAGACAGTAGCGATTCAGGCGCTCTGCTGAATGAAGAAAGCAGCTCTAATGTCACTGTGGCGGCTCCGGTGACGGTTCCAGGAGGTAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G22 TTTCTTCCAGTTTGTGAAAATGGAGCAGACGGAGGATCATGAGGACTTTCTGAGTGGAGAAGAAGCTTGTGAATTCTTTTCCGATGAACAACCGCCGTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 TTTCTTCCAGTTTGTGAAAATGGAGCAGACGGAGGATCATGAGGACTTTCTGAGTGGAGAAGAAGCTTGTGAATTCTTTTCCGATGAACAACCGCCGTCT 810 820 830 840 850 860 870 880 890 900 910 920 930 AT2G22 CTACACTGGTACTCCACCGTTGATCATTGGAAT ::::::::::::::::::::::::::::::::: RE_053 CTACACTGGTACTCCACCGTTGATCATTGGAAT 910 920 930 10 20 30 40 50 60 70 80 90 100 AT2G22 MMKRLSSSDSVGGLISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: RE_053 MMKRLSSSDSVGGLISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELESKLEPERKVKLAQELGLQP 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G22 RQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSSP ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: RE_053 RQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLETKLNGGGGEEEEEENNAAVTTESDISVKEEEVSLPEKITEAPSSP 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G22 PQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSSALLNEESSSNVTVAAPVTVPGGNFFQFVKMEQTEDHEDFLSGEEACEFFSDEQPPS ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_053 PQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGSSDSSDSGALLNEESSSNVTVAAPVTVPGGNFFQFVKMEQTEDHEDFLSGEEACEFFSDEQPPS 210 220 230 240 250 260 270 280 290 300 310 AT2G22 LHWYSTVDHWN ::::::::::: RE_053 LHWYSTVDHWN 310

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