◆◆◆RE_0589 detail◆◆◆

Code name	RE_0589
Locus	AT1G12260
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0520_20080229_0589_FRW1_525
sequence	>RE_0589_1185bp ATGAATTCATTTTCCCACGTCCCTCCGGGTTTTAGATTTCACCCGACAGATGAAGAACTTGTAGACTACTACCTGAGGAAAAAAGTCGCATCGAAGAGAA TAGAAATTGATTTCATAAAGGACATTGATCTTTACAAGATTGAGCCATGGGACCTTCAAGAGTTGTGCAAAATTGGGCATGAAGAGCAGAGTGATTGGTA CTTCTTTAGCCATAAAGACAAGAAGTATCCCACAGGGACTCGAACCAATAGAGCAACAAAAGCAGGGTTTTGGAAAGCCACCGGAAGAGATAAGGCTATC TATTTGAGGCATAGTCTAATTGGCATGAGGAAAACACTTGTGTTTTACAAGGGAAGAGCCCCAAATGGACAAAAGTCTGATTGGATCATGCACGAATACC GCTTAGAAACCGATGAAAACGGAACTCCTCAGGAAGAAGGATGGGTTGTGTGTAGGGTTTTCAAGAAGAGATTGGCTGCAGTTAGACGAATGGGAGATTA CGACTCATCCCCTTCACATTGGTACGATGATCAACTTTCTTTTATGGCCTCCGAGCTCGAGACAAACGGTCAACGACGGATTCTCCCCAATCATCATCAG CAGCAGCAGCACGAGCACCAACAACATATGCCATATGGCCTCAATGCATCTGCTTACGCTCTCAACAACCCTAACTTGCAATGCAAGCAAGAGCTAGAAC TACACTACAACCACCTGGTACAACGAAATCATCTTCTTGATGAATCTCATTTATCGTTCCTCCAACTTCCTCAACTAGAAAGCCCTAAGATTCAACAAGA TAACAGTAATTGCAACTCTCTTCCTTATGGAACGAGCAACATCGATAATAACTCGAGCCATAATGCTAACTTGCAGCAATCAAATATCGCGCATGAGGAA CAATTGAATCAAGGAAATCAGAACTTCAGCTCTCTATACATGAACAGCGGCAACGAGCAAGTGATGGACCAAGTCACAGACTGGAGAGTTCTCGATAAAT TTGTTGCTTCTCAGCTAAGCAACGAGGAGGCTGCCACAGCTTCTGCATCTATACAGAATAATGCCAAGGACACAAGCAATGCTGAGTACCAAGTTGATGA AGAAAAAGATCCGAAAAGGGCTTCAGACATGGGAGAAGAATATACTGCTTCTACTTCTTCGAGTTGTCAGATTGATCTATGGAAG >RE_0589_translated MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI YLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLSFMASELETNGQRRILPNHHQ QQQHEHQQHMPYGLNASAYALNNPNLQCKQELELHYNHLVQRNHLLDESHLSFLQLPQLESPKIQQDNSNCNSLPYGTSNIDNNSSHNANLQQSNIAHEE QLNQGNQNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSNEEAATASASIQNNAKDTSNAEYQVDEEKDPKRASDMGEEYTASTSSSCQIDLWK
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1184/1185 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G12 ATGAATTCATTTTCCCACGTCCCTCCGGGTTTTAGATTTCACCCGACAGATGAAGAACTTGTAGACTACTACCTGAGGAAAAAAGTCGCATCGAAGAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 ATGAATTCATTTTCCCACGTCCCTCCGGGTTTTAGATTTCACCCGACAGATGAAGAACTTGTAGACTACTACCTGAGGAAAAAAGTCGCATCGAAGAGAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G12 TAGAAATTGATTTCATAAAGGACATTGATCTTTACAAGATTGAGCCATGGGACCTTCAAGAGTTGTGCAAAATTGGGCATGAAGAGCAGAGTGATTGGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 TAGAAATTGATTTCATAAAGGACATTGATCTTTACAAGATTGAGCCATGGGACCTTCAAGAGTTGTGCAAAATTGGGCATGAAGAGCAGAGTGATTGGTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G12 CTTCTTTAGCCATAAAGACAAGAAGTATCCCACAGGGACTCGAACCAATAGAGCAACAAAAGCAGGGTTTTGGAAAGCCACCGGAAGAGATAAGGCTATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 CTTCTTTAGCCATAAAGACAAGAAGTATCCCACAGGGACTCGAACCAATAGAGCAACAAAAGCAGGGTTTTGGAAAGCCACCGGAAGAGATAAGGCTATC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G12 TATTTGAGGCATAGTCTAATTGGCATGAGGAAAACACTTGTGTTTTACAAGGGAAGAGCCCCAAATGGACAAAAGTCTGATTGGATCATGCACGAATACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 TATTTGAGGCATAGTCTAATTGGCATGAGGAAAACACTTGTGTTTTACAAGGGAAGAGCCCCAAATGGACAAAAGTCTGATTGGATCATGCACGAATACC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G12 GCTTAGAAACCGATGAAAACGGAACTCCTCAGGAAGAAGGATGGGTTGTGTGTAGGGTTTTCAAGAAGAGATTGGCTGCAGTTAGACGAATGGGAGATTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 GCTTAGAAACCGATGAAAACGGAACTCCTCAGGAAGAAGGATGGGTTGTGTGTAGGGTTTTCAAGAAGAGATTGGCTGCAGTTAGACGAATGGGAGATTA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G12 CGACTCATCCCCTTCACATTGGTACGATGATCAACTTTCTTTTATGGCCTCCGAGCTCGAGACAAACGGTCAACGACGGATTCTCCCCAATCATCATCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 CGACTCATCCCCTTCACATTGGTACGATGATCAACTTTCTTTTATGGCCTCCGAGCTCGAGACAAACGGTCAACGACGGATTCTCCCCAATCATCATCAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G12 CAGCAGCAGCACGAGCACCAACAACATATGCCATATGGCCTCAATGCATCTGCTTACGCTCTCAACAACCCTAACTTGCAATGCAAGCAAGAGCTAGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 CAGCAGCAGCACGAGCACCAACAACATATGCCATATGGCCTCAATGCATCTGCTTACGCTCTCAACAACCCTAACTTGCAATGCAAGCAAGAGCTAGAAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G12 TACACTACAACCACCTGGTACAACGAAATCATCTTCTTGATGAATCTCATTTATCGTTCCTCCAACTTCCTCAACTAGAAAGCCCTAAGATTCAACAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 TACACTACAACCACCTGGTACAACGAAATCATCTTCTTGATGAATCTCATTTATCGTTCCTCCAACTTCCTCAACTAGAAAGCCCTAAGATTCAACAAGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G12 TAACAGTAATTGCAACTCTCTTCCTTATGGAACAAGCAACATCGATAATAACTCGAGCCATAATGCTAACTTGCAGCAATCAAATATCGCGCATGAGGAA ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 TAACAGTAATTGCAACTCTCTTCCTTATGGAACGAGCAACATCGATAATAACTCGAGCCATAATGCTAACTTGCAGCAATCAAATATCGCGCATGAGGAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G12 CAATTGAATCAAGGAAATCAGAACTTCAGCTCTCTATACATGAACAGCGGCAACGAGCAAGTGATGGACCAAGTCACAGACTGGAGAGTTCTCGATAAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 CAATTGAATCAAGGAAATCAGAACTTCAGCTCTCTATACATGAACAGCGGCAACGAGCAAGTGATGGACCAAGTCACAGACTGGAGAGTTCTCGATAAAT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G12 TTGTTGCTTCTCAGCTAAGCAACGAGGAGGCTGCCACAGCTTCTGCATCTATACAGAATAATGCCAAGGACACAAGCAATGCTGAGTACCAAGTTGATGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 TTGTTGCTTCTCAGCTAAGCAACGAGGAGGCTGCCACAGCTTCTGCATCTATACAGAATAATGCCAAGGACACAAGCAATGCTGAGTACCAAGTTGATGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 AT1G12 AGAAAAAGATCCGAAAAGGGCTTCAGACATGGGAGAAGAATATACTGCTTCTACTTCTTCGAGTTGTCAGATTGATCTATGGAAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 AGAAAAAGATCCGAAAAGGGCTTCAGACATGGGAGAAGAATATACTGCTTCTACTTCTTCGAGTTGTCAGATTGATCTATGGAAG 1110 1120 1130 1140 1150 1160 1170 1180 10 20 30 40 50 60 70 80 90 100 AT1G12 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G12 YLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLSFMASELETNGQRRILPNHHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 YLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQLSFMASELETNGQRRILPNHHQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G12 QQQHEHQQHMPYGLNASAYALNNPNLQCKQELELHYNHLVQRNHLLDESHLSFLQLPQLESPKIQQDNSNCNSLPYGTSNIDNNSSHNANLQQSNIAHEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 QQQHEHQQHMPYGLNASAYALNNPNLQCKQELELHYNHLVQRNHLLDESHLSFLQLPQLESPKIQQDNSNCNSLPYGTSNIDNNSSHNANLQQSNIAHEE 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G12 QLNQGNQNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSNEEAATASASIQNNAKDTSNAEYQVDEEKDPKRASDMGEEYTASTSSSCQIDLWK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_058 QLNQGNQNFSSLYMNSGNEQVMDQVTDWRVLDKFVASQLSNEEAATASASIQNNAKDTSNAEYQVDEEKDPKRASDMGEEYTASTSSSCQIDLWK 310 320 330 340 350 360 370 380 390

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