◆◆◆RE_0591 detail◆◆◆

Code name	RE_0591
Locus	AT1G25580
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0526_20080115_0591_FRW1_555
sequence	>RE_0591_1347bp ATGGCTGGGCGATCATGGCTGATCGATAGCAACCGGATTGCAACGAAGATTATGAGTGCATCGGCTAGTTCCGATCCTCGCCAAGTGGTGTGGAAGAGCA ACCCGTCAAGACATTGTCCCAAGTGTCAACATGTCATTGACAACAGTGATGTTGTTGATGATTGGCCAGGATTGCCTCGAGGTGTGAAATTTGATCCATC TGATCCTGAGATCATATGGCATTTGCTAGCCAAATCTGGTTTGTCAGGGTTAAGCTCACACCCTTTCATTGATGAGTTCATCCCAACCGTCAATCAAGAT GATGGAATCTGTTACACTCATCCTAAGAATTTACCAGGTGTTAAGAGCGATGGGACGGTGTCTCACTTCTTCCATAAAGCAATCAAAGCTTATAGCACAG GAACTCGAAAGCGTAGAAAGATTCACGACGATGATTTTGGCGATGTGCGCTGGCATAAGACAGGAAGGACGAAACCGGTTGTGTTGGATGGTGTTCAAAG AGGTTGCAAGAAGATAATGGTTCTCTATGGCGGAAAAGCTGTGAAAACCAACTGGGTGATGCACCAATACCATTTGGGAATAGAAGAAGACGAGAAGGAA GGTGATTATGTTGTTTCTAAGATTTTCTACCAGCAGCCACAACAGCTAGTAGTCAAGCGAGGTGATAAAGCTGAACAGGAAGTCTCTGAGGATATCTTTG CTGCAGTGACTCCAACAGCGGATCCTGTCACTCCAAAATTAGCTACACCTGAGCCTCGAAATGCTGTGCGAATTTGCTCTGATTCTCACATTGCCAGTGA CTATGTTACTCCCAGTGACTATGTATCTGCCCATGAGGTTTCTCTTGCCGAGACATCCGAGGTAATGTGTATGGAAGATGAGGTTCAGAGTATTCAACCT AATCATGAAAGACCAAGTTCTGGGCCTGAGCTGGAGCACGGACTTGAAAACGGAGCAAAAGAAATGTTAGATGATAAAGAGGAGCAAGAGAAGGATAGAG ACAATGAAAACCAAGGTGAGGAAGATCCGACGTGGTTTGACAGTGGATCTCAGTTTATCTTGAATTCGCAACAGCTTGTGGAAGCCTTGTCTCTTTGCGA CGATCTCTTGGGATCACAGGACAGGGAGGAAAACACAAACAGTGGAAGCTTAAAGGATAAACAACCATGTATTGCGGATTACGCACACCTAGGACCAGAA GACTTCAAACGTGATCTGGAGGAATGTCAGAAAATCGTTCTTGATCCCTCTAACATAGAGCTTGATACTCCACCTGAGTTTCGTCTGAGCCAGCTGGAAT TTGGATCACAGGACAGCTTTCTCGCTTGGGGGACTGGAAAGACTGAT >RE_0591_translated MAGRSWLIDSNRIATKIMSASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQD DGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLYGGKAVKTNWVMHQYHLGIEEDEKE GDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEPRNAVRICSDSHIASDYVTPSDYVSAHEVSLAETSEVMCMEDEVQSIQP NHERPSSGPELEHGLENGAKEMLDDKEEQEKDRDNENQGEEDPTWFDSGSQFILNSQQLVEALSLCDDLLGSQDREENTNSGSLKDKQPCIADYAHLGPE DFKRDLEECQKIVLDPSNIELDTPPEFRLSQLEFGSQDSFLAWGTGKTD
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1345/1347 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G25 ATGGCTGGGCGATCATGGCTGATCGATAGCAACCGGATTGCAACGAAGATTATGAGTGCATCGGCTAGTTCCGATCCTCGCCAAGTGGTGTGGAAGAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 ATGGCTGGGCGATCATGGCTGATCGATAGCAACCGGATTGCAACGAAGATTATGAGTGCATCGGCTAGTTCCGATCCTCGCCAAGTGGTGTGGAAGAGCA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G25 ACCCGTCAAGACATTGTCCCAAGTGTCAACATGTCATTGACAACAGTGATGTTGTTGATGATTGGCCAGGATTGCCTCGAGGTGTGAAATTTGATCCATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 ACCCGTCAAGACATTGTCCCAAGTGTCAACATGTCATTGACAACAGTGATGTTGTTGATGATTGGCCAGGATTGCCTCGAGGTGTGAAATTTGATCCATC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G25 TGATCCTGAGATCATATGGCATTTGCTAGCCAAATCTGGTTTGTCAGGGTTAAGCTCACACCCTTTCATTGATGAGTTCATCCCAACCGTCAATCAAGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 TGATCCTGAGATCATATGGCATTTGCTAGCCAAATCTGGTTTGTCAGGGTTAAGCTCACACCCTTTCATTGATGAGTTCATCCCAACCGTCAATCAAGAT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G25 GATGGAATCTGTTACACTCATCCTAAGAATTTACCAGGTGTTAAGAGTGATGGGACGGTGTCTCACTTCTTCCATAAAGCAATCAAAGCTTATAGCACAG ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 GATGGAATCTGTTACACTCATCCTAAGAATTTACCAGGTGTTAAGAGCGATGGGACGGTGTCTCACTTCTTCCATAAAGCAATCAAAGCTTATAGCACAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G25 GAACTCGAAAGCGTAGAAAGATTCACGACGATGATTTTGGCGATGTGCGCTGGCATAAGACAGGAAGAACGAAACCGGTTGTGTTGGATGGTGTTCAAAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: RE_059 GAACTCGAAAGCGTAGAAAGATTCACGACGATGATTTTGGCGATGTGCGCTGGCATAAGACAGGAAGGACGAAACCGGTTGTGTTGGATGGTGTTCAAAG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G25 AGGTTGCAAGAAGATAATGGTTCTCTATGGCGGAAAAGCTGTGAAAACCAACTGGGTGATGCACCAATACCATTTGGGAATAGAAGAAGACGAGAAGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 AGGTTGCAAGAAGATAATGGTTCTCTATGGCGGAAAAGCTGTGAAAACCAACTGGGTGATGCACCAATACCATTTGGGAATAGAAGAAGACGAGAAGGAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G25 GGTGATTATGTTGTTTCTAAGATTTTCTACCAGCAGCCACAACAGCTAGTAGTCAAGCGAGGTGATAAAGCTGAACAGGAAGTCTCTGAGGATATCTTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 GGTGATTATGTTGTTTCTAAGATTTTCTACCAGCAGCCACAACAGCTAGTAGTCAAGCGAGGTGATAAAGCTGAACAGGAAGTCTCTGAGGATATCTTTG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G25 CTGCAGTGACTCCAACAGCGGATCCTGTCACTCCAAAATTAGCTACACCTGAGCCTCGAAATGCTGTGCGAATTTGCTCTGATTCTCACATTGCCAGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 CTGCAGTGACTCCAACAGCGGATCCTGTCACTCCAAAATTAGCTACACCTGAGCCTCGAAATGCTGTGCGAATTTGCTCTGATTCTCACATTGCCAGTGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G25 CTATGTTACTCCCAGTGACTATGTATCTGCCCATGAGGTTTCTCTTGCCGAGACATCCGAGGTAATGTGTATGGAAGATGAGGTTCAGAGTATTCAACCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 CTATGTTACTCCCAGTGACTATGTATCTGCCCATGAGGTTTCTCTTGCCGAGACATCCGAGGTAATGTGTATGGAAGATGAGGTTCAGAGTATTCAACCT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G25 AATCATGAAAGACCAAGTTCTGGGCCTGAGCTGGAGCACGGACTTGAAAACGGAGCAAAAGAAATGTTAGATGATAAAGAGGAGCAAGAGAAGGATAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 AATCATGAAAGACCAAGTTCTGGGCCTGAGCTGGAGCACGGACTTGAAAACGGAGCAAAAGAAATGTTAGATGATAAAGAGGAGCAAGAGAAGGATAGAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G25 ACAATGAAAACCAAGGTGAGGAAGATCCGACGTGGTTTGACAGTGGATCTCAGTTTATCTTGAATTCGCAACAGCTTGTGGAAGCCTTGTCTCTTTGCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 ACAATGAAAACCAAGGTGAGGAAGATCCGACGTGGTTTGACAGTGGATCTCAGTTTATCTTGAATTCGCAACAGCTTGTGGAAGCCTTGTCTCTTTGCGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G25 CGATCTCTTGGGATCACAGGACAGGGAGGAAAACACAAACAGTGGAAGCTTAAAGGATAAACAACCATGTATTGCGGATTACGCACACCTAGGACCAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 CGATCTCTTGGGATCACAGGACAGGGAGGAAAACACAAACAGTGGAAGCTTAAAGGATAAACAACCATGTATTGCGGATTACGCACACCTAGGACCAGAA 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT1G25 GACTTCAAACGTGATCTGGAGGAATGTCAGAAAATCGTTCTTGATCCCTCTAACATAGAGCTTGATACTCCACCTGAGTTTCGTCTGAGCCAGCTGGAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 GACTTCAAACGTGATCTGGAGGAATGTCAGAAAATCGTTCTTGATCCCTCTAACATAGAGCTTGATACTCCACCTGAGTTTCGTCTGAGCCAGCTGGAAT 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 AT1G25 TTGGATCACAGGACAGCTTTCTCGCTTGGGGGACTGGAAAGACTGAT ::::::::::::::::::::::::::::::::::::::::::::::: RE_059 TTGGATCACAGGACAGCTTTCTCGCTTGGGGGACTGGAAAGACTGAT 1310 1320 1330 1340 10 20 30 40 50 60 70 80 90 100 AT1G25 MAGRSWLIDSNRIATKIMSASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 MAGRSWLIDSNRIATKIMSASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQD 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G25 DGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLYGGKAVKTNWVMHQYHLGIEEDEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 DGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLYGGKAVKTNWVMHQYHLGIEEDEKE 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G25 GDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEPRNAVRICSDSHIASDYVTPSDYVSAHEVSLAETSEVMCMEDEVQSIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 GDYVVSKIFYQQPQQLVVKRGDKAEQEVSEDIFAAVTPTADPVTPKLATPEPRNAVRICSDSHIASDYVTPSDYVSAHEVSLAETSEVMCMEDEVQSIQP 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G25 NHERPSSGPELEHGLENGAKEMLDDKEEQEKDRDNENQGEEDPTWFDSGSQFILNSQQLVEALSLCDDLLGSQDREENTNSGSLKDKQPCIADYAHLGPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 NHERPSSGPELEHGLENGAKEMLDDKEEQEKDRDNENQGEEDPTWFDSGSQFILNSQQLVEALSLCDDLLGSQDREENTNSGSLKDKQPCIADYAHLGPE 310 320 330 340 350 360 370 380 390 400 410 420 430 440 AT1G25 DFKRDLEECQKIVLDPSNIELDTPPEFRLSQLEFGSQDSFLAWGTGKTD ::::::::::::::::::::::::::::::::::::::::::::::::: RE_059 DFKRDLEECQKIVLDPSNIELDTPPEFRLSQLEFGSQDSFLAWGTGKTD 410 420 430 440

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