◆◆◆RE_0603 detail◆◆◆

Code name	RE_0603
Locus	AT1G62700
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.20%一致
comment	0520_third_0603_FRW1_555
sequence	>RE_0603_1182bp ATGAATTCGTTTTCACAAGTACCTCCTGGCTTCAGATTTCATCCTACTGATGAAGAACTTGTAGACTACTACTTGAGGAAAAAAGTTGCATCAAAGAGAA TAGAAATCGATATCATCAAGGATGTTGATCTTTACAAGATTGAGCCATGTGATCTTCAAGAGTTATGCAAGATAGGAAACGAAGAGCAGAGCGAATGGTA CTTCTTTAGTCATAAAGACAAGAAGTATCCCACGGGAACTCGAACCAATAGAGCCACGAAAGCAGGATTTTGGAAAGCCACTGGAAGAGACAAGGCTATA TATATAAGACATAGTCTTATCGGTATGAGGAAAACACTTGTGTTTTACAAAGGAAGAGCCCCAAATGGTCAGAAATCCGATTGGATCATGCACGAATATC GCTTAGAAACAAGTGAAAATGGAACCCCTCAGGAAGAAGGATGGGTAGTATGTAGGGTATTCAAGAAGAAATTGGCAGCGACAGTGAGGAAAATGGGAGA TTACCATTCATCACCATCGCAGCATTGGTACGATGATCAGCTCTCTTTTATGGCCTCCGAGATCATTTCTAGTTCTCCACGACAGTTTCTTCCCAATCAT CATTATAACCGCCACCATCACCAGCAGACATTGCCTTGTGGCCTCAATGCATTCAACAACAACAATCCTAACTTGCAATGCAAGCAAGAGCTCGAGTTAC ATTACAATCAAATGGTACAACATCAACAACAAAACCATCATCTTCGTGAATCTATGTTTCTCCAGCTTCCTCAGCTCGAAAGCCCTACCAGTAATTGCAA TTCTGACAACAACAATAACACAAGAAATATTAGTAACTTGCAGAAATCATCAAATATATCTCATGAGGAACAATTGCAACAAGGGAATCAAAGTTTCAGC TCTCTGTATTACGATCAAGGAGTAGAGCAAATGACTACTGACTGGAGAGTTCTCGATAAATTTGTTGCTTCACAGCTTAGCAATGATGAAGAGGCTGCAG CCGTGGTTTCTTCTTCTTCTCATCAAAACAACGTCAATAATAACACGAGAAACACGGGTTATCATGTGATAGATGAGGGAATAAATTTGCCGGAGAATGA TTCTGAAAGGGTTGTTGAAATGGGAGAAGAGTATTCAAATGCTCATGCTGCTTCTACTTCTTCAAGTTGTCAGATTGATCTC >RE_0603_translated MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGNEEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI YIRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETSENGTPQEEGWVVCRVFKKKLAATVRKMGDYHSSPSQHWYDDQLSFMASEIISSSPRQFLPNH HYNRHHHQQTLPCGLNAFNNNNPNLQCKQELELHYNQMVQHQQQNHHLRESMFLQLPQLESPTSNCNSDNNNNTRNISNLQKSSNISHEEQLQQGNQSFS SLYYDQGVEQMTTDWRVLDKFVASQLSNDEEAAAVVSSSSHQNNVNNNTRNTGYHVIDEGINLPENDSERVVEMGEEYSNAHAASTSSSCQIDL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1179/1182 (99.7%)（アミノ酸配列で391/394 (99.2%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G62 ATGAATTCGTTTTCACAAGTACCTCCTGGCTTCAGATTTCATCCTACTGATGAAGAACTTGTAGACTACTACTTGAGGAAAAAAGTTGCATCAAAGAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 ATGAATTCGTTTTCACAAGTACCTCCTGGCTTCAGATTTCATCCTACTGATGAAGAACTTGTAGACTACTACTTGAGGAAAAAAGTTGCATCAAAGAGAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G62 TAGAAATCGATATCATCAAGGATGTTGATCTTTACAAGATTGAGCCATGTGATCTTCAAGAGTTATGCAAGATAGGAAACGAAGAGCAGAGCGAATGGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 TAGAAATCGATATCATCAAGGATGTTGATCTTTACAAGATTGAGCCATGTGATCTTCAAGAGTTATGCAAGATAGGAAACGAAGAGCAGAGCGAATGGTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G62 CTTCTTTAGTCATAAAGACAAGAAGTATCCCACGGGAACTCGAACCAATAGAGCCACGAAAGCAGGATTTTGGAAAGCCACTGGAAGAGACAAGGCTATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 CTTCTTTAGTCATAAAGACAAGAAGTATCCCACGGGAACTCGAACCAATAGAGCCACGAAAGCAGGATTTTGGAAAGCCACTGGAAGAGACAAGGCTATA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G62 TATATAAGACATAGTCTTATCGGTATGAGGAAAACACTTGTGTTTTACAAAGGAAGAGCCCCAAATGGTCAGAAATCCGATTGGATCATGCACGAATATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 TATATAAGACATAGTCTTATCGGTATGAGGAAAACACTTGTGTTTTACAAAGGAAGAGCCCCAAATGGTCAGAAATCCGATTGGATCATGCACGAATATC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G62 GCTTAGAAACAAGTGAAAATGGAACCCCTCAGGAAGAAGGATGGGTAGTATGTAGGGTATTCAAGAAGAAATTGGCAGCGACAGTGAGGAAAATGGGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 GCTTAGAAACAAGTGAAAATGGAACCCCTCAGGAAGAAGGATGGGTAGTATGTAGGGTATTCAAGAAGAAATTGGCAGCGACAGTGAGGAAAATGGGAGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G62 TTACCATTCATCACCATCGCAGCATTGGTACGATGATCAGCTCTCTTTTATGGCCTCCGAGATCATTTCTAGTTCTCCACGACAGTTTCTTCCCAATCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 TTACCATTCATCACCATCGCAGCATTGGTACGATGATCAGCTCTCTTTTATGGCCTCCGAGATCATTTCTAGTTCTCCACGACAGTTTCTTCCCAATCAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G62 CATTATAACCGCCACCATCACCAGCAGACATTGCCTTGTGGCCTCAATGCATTCAACAACAACAATCCTAACTTGCAATGCAAGCAAGAGCTCGAGTTAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 CATTATAACCGCCACCATCACCAGCAGACATTGCCTTGTGGCCTCAATGCATTCAACAACAACAATCCTAACTTGCAATGCAAGCAAGAGCTCGAGTTAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G62 ATTACAATCAAATGGTACAACATCAACAACAAAACCATCATCTTCGTGAATCTATGTTTCTCCAGCTTCCTCAGCTCGAAAGCCCTACCAGTAATTGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 ATTACAATCAAATGGTACAACATCAACAACAAAACCATCATCTTCGTGAATCTATGTTTCTCCAGCTTCCTCAGCTCGAAAGCCCTACCAGTAATTGCAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G62 TTCTGACAACAACAATAACACAAGAAATATTAGTAACTTGCAGAAATCATCAAATATATCTCATGAGGAACAATTGCAACAAGGGAATCAAAGTTTCAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 TTCTGACAACAACAATAACACAAGAAATATTAGTAACTTGCAGAAATCATCAAATATATCTCATGAGGAACAATTGCAACAAGGGAATCAAAGTTTCAGC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G62 TCTCTGTATTACGATCAAGGAGTAGAGCAAATGACTACTGACTGGAGAGTTCTCGATAAATTTGTTGCTTCACAGCTTAGCAATGATGAAGAGGCTGCAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 TCTCTGTATTACGATCAAGGAGTAGAGCAAATGACTACTGACTGGAGAGTTCTCGATAAATTTGTTGCTTCACAGCTTAGCAATGATGAAGAGGCTGCAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G62 CCGTGGTTTCTTCTTCTTCTCATCAAAACAACGTCAAGATTGACACGAGAAACACGGGTTATCATGTGATAGATGAGGGAATAAATTTGCCGGAGAATGA ::::::::::::::::::::::::::::::::::::: : : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 CCGTGGTTTCTTCTTCTTCTCATCAAAACAACGTCAATAATAACACGAGAAACACGGGTTATCATGTGATAGATGAGGGAATAAATTTGCCGGAGAATGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 AT1G62 TTCTGAAAGGGTTGTTGAAATGGGAGAAGAGTATTCAAATGCTCATGCTGCTTCTACTTCTTCAAGTTGTCAGATTGATCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 TTCTGAAAGGGTTGTTGAAATGGGAGAAGAGTATTCAAATGCTCATGCTGCTTCTACTTCTTCAAGTTGTCAGATTGATCTC 1110 1120 1130 1140 1150 1160 1170 1180 10 20 30 40 50 60 70 80 90 100 AT1G62 MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGNEEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 MNSFSQVPPGFRFHPTDEELVDYYLRKKVASKRIEIDIIKDVDLYKIEPCDLQELCKIGNEEQSEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G62 YIRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETSENGTPQEEGWVVCRVFKKKLAATVRKMGDYHSSPSQHWYDDQLSFMASEIISSSPRQFLPNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 YIRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETSENGTPQEEGWVVCRVFKKKLAATVRKMGDYHSSPSQHWYDDQLSFMASEIISSSPRQFLPNH 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G62 HYNRHHHQQTLPCGLNAFNNNNPNLQCKQELELHYNQMVQHQQQNHHLRESMFLQLPQLESPTSNCNSDNNNNTRNISNLQKSSNISHEEQLQQGNQSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_060 HYNRHHHQQTLPCGLNAFNNNNPNLQCKQELELHYNQMVQHQQQNHHLRESMFLQLPQLESPTSNCNSDNNNNTRNISNLQKSSNISHEEQLQQGNQSFS 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 AT1G62 SLYYDQGVEQMTTDWRVLDKFVASQLSNDEEAAAVVSSSSHQNNVKIDTRNTGYHVIDEGINLPENDSERVVEMGEEYSNAHAASTSSSCQIDL ::::::::::::::::::::::::::::::::::::::::::::: .:::::::::::::::::::::::::::::::::::::::::::::: RE_060 SLYYDQGVEQMTTDWRVLDKFVASQLSNDEEAAAVVSSSSHQNNVNNNTRNTGYHVIDEGINLPENDSERVVEMGEEYSNAHAASTSSSCQIDL 310 320 330 340 350 360 370 380 390

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