| Code name | RE_0604 | |||
|---|---|---|---|---|
| Locus | AT1G64105 | |||
| Forward primer | ||||
| Reverse primer | ||||
| Alignment with TAIR7CDS | アミノ酸配列100%一致 | |||
| comment | 0229_アミノ酸配列100%一致 | |||
| sequence |
>RE_0604_483bp ATGCAGGCGGAGGAGATAATATGCCGTGTTTCAGACGAAGAGATCATCGAGAATTACCTGAGGCCAAAGATAAACGGTGAAACATCTTCAATCCCAAGAT ATGTTGTGGAATTGGCAGAGGAGCTGTACACTGTAGAGCCTTGGCTGCTTCCTCGACAAACAGCTCCAATTCTCAACCCTGGCGAGTGGTTCTACTTTGG GAAACGCAATCGAAAGTATAGTAACTTGGAAGGTGTTCATTGCGAGGGATCGTGGATACTCGAAGACGGTTGCATCGCAGTCCTGTCCAAGGAGACGGGT GAGGAAATTGGTGGAACGACGAGATTTAGGTATTACTATAGGAACAAGGGGGATAAAGAGAGTCGTCTGAAGATGAGCAATTGGTTTATGAGAGAGTATC GTCTCTATTACAAATCCAGGAGAGTCTTCAATGGACGTCAGGTTTTCTGCATTATCACTTGTAATGATGAACATTTTATCGAA >RE_0604_translated MQAEEIICRVSDEEIIENYLRPKINGETSSIPRYVVELAEELYTVEPWLLPRQTAPILNPGEWFYFGKRNRKYSNLEGVHCEGSWILEDGCIAVLSKETG EEIGGTTRFRYYYRNKGDKESRLKMSNWFMREYRLYYKSRRVFNGRQVFCIITCNDEHFIE |
|||
| Alignment |
◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 482/483 (99.8%)（アミノ酸配列で100%）一致しました。
10 20 30 40 50 60 70 80 90 100
AT1G64 ATGCAGGCGGAGGAGATAATATGCCGTGTTTCAGACGAAGAGATCATCGAGAATTACCTGAGGCCAAAGATAAACGGTGAAACATCTTCAATCCCGAGAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
RE_060 ATGCAGGCGGAGGAGATAATATGCCGTGTTTCAGACGAAGAGATCATCGAGAATTACCTGAGGCCAAAGATAAACGGTGAAACATCTTCAATCCCAAGAT
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160 170 180 190 200
AT1G64 ATGTTGTGGAATTGGCAGAGGAGCTGTACACTGTAGAGCCTTGGCTGCTTCCTCGACAAACAGCTCCAATTCTCAACCCTGGCGAGTGGTTCTACTTTGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_060 ATGTTGTGGAATTGGCAGAGGAGCTGTACACTGTAGAGCCTTGGCTGCTTCCTCGACAAACAGCTCCAATTCTCAACCCTGGCGAGTGGTTCTACTTTGG
110 120 130 140 150 160 170 180 190 200
210 220 230 240 250 260 270 280 290 300
AT1G64 GAAACGCAATCGAAAGTATAGTAACTTGGAAGGTGTTCATTGCGAGGGATCGTGGATACTCGAAGACGGTTGCATCGCAGTCCTGTCCAAGGAGACGGGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_060 GAAACGCAATCGAAAGTATAGTAACTTGGAAGGTGTTCATTGCGAGGGATCGTGGATACTCGAAGACGGTTGCATCGCAGTCCTGTCCAAGGAGACGGGT
210 220 230 240 250 260 270 280 290 300
310 320 330 340 350 360 370 380 390 400
AT1G64 GAGGAAATTGGTGGAACGACGAGATTTAGGTATTACTATAGGAACAAGGGGGATAAAGAGAGTCGTCTGAAGATGAGCAATTGGTTTATGAGAGAGTATC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_060 GAGGAAATTGGTGGAACGACGAGATTTAGGTATTACTATAGGAACAAGGGGGATAAAGAGAGTCGTCTGAAGATGAGCAATTGGTTTATGAGAGAGTATC
310 320 330 340 350 360 370 380 390 400
410 420 430 440 450 460 470 480
AT1G64 GTCTCTATTACAAATCCAGGAGAGTCTTCAATGGACGTCAGGTTTTCTGCATTATCACTTGTAATGATGAACATTTTATCGAA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_060 GTCTCTATTACAAATCCAGGAGAGTCTTCAATGGACGTCAGGTTTTCTGCATTATCACTTGTAATGATGAACATTTTATCGAA
410 420 430 440 450 460 470 480
10 20 30 40 50 60 70 80 90 100
AT1G64 MQAEEIICRVSDEEIIENYLRPKINGETSSIPRYVVELAEELYTVEPWLLPRQTAPILNPGEWFYFGKRNRKYSNLEGVHCEGSWILEDGCIAVLSKETG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_060 MQAEEIICRVSDEEIIENYLRPKINGETSSIPRYVVELAEELYTVEPWLLPRQTAPILNPGEWFYFGKRNRKYSNLEGVHCEGSWILEDGCIAVLSKETG
10 20 30 40 50 60 70 80 90 100
110 120 130 140 150 160
AT1G64 EEIGGTTRFRYYYRNKGDKESRLKMSNWFMREYRLYYKSRRVFNGRQVFCIITCNDEHFIE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
RE_060 EEIGGTTRFRYYYRNKGDKESRLKMSNWFMREYRLYYKSRRVFNGRQVFCIITCNDEHFIE
110 120 130 140 150 160
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