◆◆◆RE_0616 detail◆◆◆

Code name	RE_0616
Locus	AT2G46770
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0229_アミノ酸配列100%一致
sequence	>RE_0616_1095bp ATGATGTCAAAATCTATGAGCATATCAGTGAACGGACAATCTCAAGTGCCTCCTGGGTTTAGGTTTCATCCGACCGAGGAAGAGCTGTTGCAGTATTATC TCCGGAAGAAAGTTAATAGCATCGAGATCGATCTTGATGTCATTCGCGACGTTGATCTCAACAAGCTCGAGCCTTGGGACATTCAAGAGATGTGTAAAAT AGGAACAACGCCACAAAACGACTGGTATTTCTTTAGCCACAAGGACAAAAAATATCCGACGGGAACGAGAACTAACAGAGCCACTGCGGCTGGATTTTGG AAAGCAACTGGCCGCGACAAGATCATATATAGCAATGGCCGTAGAATTGGGATGAGAAAGACTCTTGTTTTCTACAAAGGCCGAGCTCCTCACGGCCAAA AATCTGATTGGATCATGCATGAATATAGACTCGATGACAACATTATTTCCCCCGAGGATGTCACCGTTCATGAGGTCGTGAGTATTATAGGGGAAGCATC ACAAGACGAAGGATGGGTGGTGTGTCGTATTTTCAAGAAGAAGAATCTTCACAAAACCCTAAACAGTCCCGTCGGAGGAGCTTCCCTGAGCGGCGGCGGA GATACGCCGAAGACGACATCATCTCAGATCTTCAACGAGGATACTCTCGACCAATTTCTTGAACTTATGGGGAGATCTTGTAAAGAAGAGCTAAATCTTG ACCCTTTCATGAAACTCCCAAACCTCGAAAGCCCTAACAGTCAGGCAATCAACAATTGCCACGTAAGCTCTCCCGACACTAATCATAATATCCACGTCAG CAACGTGGTCGACACTAGCTTTGTTACTAGCTGGGCGGCTTTAGACCGCCTCGTGGCCTCGCAGCTTAACGGACCCACATCATATTCAATTACAGCCGTC AATGAGAGCCACGTGGGCCATGATCATCTCGCTTTGCCTTCCGTCCGATCTCCGTACCCCAGCCTAAACCGGTCCGCTTCGTACCACGCCGGTTTAACAC AGGAATATACACCGGAGATGGAGCTATGGAATACGACGACGTCGTCTCTATCGTCATCGCCTGGCCCATTTTGTCACGTGTCGAATGGTAGTGGA >RE_0616_translated MMSKSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFW KATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLNSPVGGASLSGGG DTPKTTSSQIFNEDTLDQFLELMGRSCKEELNLDPFMKLPNLESPNSQAINNCHVSSPDTNHNIHVSNVVDTSFVTSWAALDRLVASQLNGPTSYSITAV NESHVGHDHLALPSVRSPYPSLNRSASYHAGLTQEYTPEMELWNTTTSSLSSSPGPFCHVSNGSG
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1094/1095 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G46 ATGATGTCAAAATCTATGAGCATATCAGTGAACGGACAATCTCAAGTGCCTCCTGGGTTTAGGTTTCATCCGACCGAGGAAGAGCTGTTGCAGTATTATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 ATGATGTCAAAATCTATGAGCATATCAGTGAACGGACAATCTCAAGTGCCTCCTGGGTTTAGGTTTCATCCGACCGAGGAAGAGCTGTTGCAGTATTATC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G46 TCCGGAAGAAAGTTAATAGCATCGAGATCGATCTTGATGTCATTCGCGACGTTGATCTCAACAAGCTCGAGCCTTGGGACATTCAAGAGATGTGTAAAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 TCCGGAAGAAAGTTAATAGCATCGAGATCGATCTTGATGTCATTCGCGACGTTGATCTCAACAAGCTCGAGCCTTGGGACATTCAAGAGATGTGTAAAAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G46 AGGAACAACGCCACAAAACGACTGGTATTTCTTTAGCCACAAGGACAAAAAATATCCGACGGGAACGAGAACTAACAGAGCCACTGCGGCTGGATTTTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 AGGAACAACGCCACAAAACGACTGGTATTTCTTTAGCCACAAGGACAAAAAATATCCGACGGGAACGAGAACTAACAGAGCCACTGCGGCTGGATTTTGG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G46 AAAGCAACTGGCCGCGACAAGATCATATATAGCAATGGCCGTAGAATTGGGATGAGAAAGACTCTTGTTTTCTACAAAGGCCGAGCTCCTCACGGCCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 AAAGCAACTGGCCGCGACAAGATCATATATAGCAATGGCCGTAGAATTGGGATGAGAAAGACTCTTGTTTTCTACAAAGGCCGAGCTCCTCACGGCCAAA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G46 AATCTGATTGGATCATGCATGAATATAGACTCGATGACAACATTATTTCCCCCGAGGATGTCACCGTTCATGAGGTCGTGAGTATTATAGGGGAAGCATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 AATCTGATTGGATCATGCATGAATATAGACTCGATGACAACATTATTTCCCCCGAGGATGTCACCGTTCATGAGGTCGTGAGTATTATAGGGGAAGCATC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G46 ACAAGACGAAGGATGGGTGGTGTGTCGTATTTTCAAGAAGAAGAATCTTCACAAAACCCTAAACAGTCCCGTCGGAGGAGCTTCCCTGAGCGGCGGCGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 ACAAGACGAAGGATGGGTGGTGTGTCGTATTTTCAAGAAGAAGAATCTTCACAAAACCCTAAACAGTCCCGTCGGAGGAGCTTCCCTGAGCGGCGGCGGA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G46 GATACGCCGAAGACGACATCATCTCAGATCTTCAACGAGGATACTCTCGACCAATTTCTTGAACTTATGGGGAGATCTTGTAAAGAAGAGCTAAATCTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 GATACGCCGAAGACGACATCATCTCAGATCTTCAACGAGGATACTCTCGACCAATTTCTTGAACTTATGGGGAGATCTTGTAAAGAAGAGCTAAATCTTG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G46 ACCCTTTCATGAAACTCCCAAACCTCGAAAGCCCTAACAGTCAGGCAATCAACAACTGCCACGTAAGCTCTCCCGACACTAATCATAATATCCACGTCAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: RE_061 ACCCTTTCATGAAACTCCCAAACCTCGAAAGCCCTAACAGTCAGGCAATCAACAATTGCCACGTAAGCTCTCCCGACACTAATCATAATATCCACGTCAG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G46 CAACGTGGTCGACACTAGCTTTGTTACTAGCTGGGCGGCTTTAGACCGCCTCGTGGCCTCGCAGCTTAACGGACCCACATCATATTCAATTACAGCCGTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 CAACGTGGTCGACACTAGCTTTGTTACTAGCTGGGCGGCTTTAGACCGCCTCGTGGCCTCGCAGCTTAACGGACCCACATCATATTCAATTACAGCCGTC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G46 AATGAGAGCCACGTGGGCCATGATCATCTCGCTTTGCCTTCCGTCCGATCTCCGTACCCCAGCCTAAACCGGTCCGCTTCGTACCACGCCGGTTTAACAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 AATGAGAGCCACGTGGGCCATGATCATCTCGCTTTGCCTTCCGTCCGATCTCCGTACCCCAGCCTAAACCGGTCCGCTTCGTACCACGCCGGTTTAACAC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 AT2G46 AGGAATATACACCGGAGATGGAGCTATGGAATACGACGACGTCGTCTCTATCGTCATCGCCTGGCCCATTTTGTCACGTGTCGAATGGTAGTGGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 AGGAATATACACCGGAGATGGAGCTATGGAATACGACGACGTCGTCTCTATCGTCATCGCCTGGCCCATTTTGTCACGTGTCGAATGGTAGTGGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 10 20 30 40 50 60 70 80 90 100 AT2G46 MMSKSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 MMSKSMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFW 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G46 KATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLNSPVGGASLSGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 KATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLNSPVGGASLSGGG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G46 DTPKTTSSQIFNEDTLDQFLELMGRSCKEELNLDPFMKLPNLESPNSQAINNCHVSSPDTNHNIHVSNVVDTSFVTSWAALDRLVASQLNGPTSYSITAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 DTPKTTSSQIFNEDTLDQFLELMGRSCKEELNLDPFMKLPNLESPNSQAINNCHVSSPDTNHNIHVSNVVDTSFVTSWAALDRLVASQLNGPTSYSITAV 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 AT2G46 NESHVGHDHLALPSVRSPYPSLNRSASYHAGLTQEYTPEMELWNTTTSSLSSSPGPFCHVSNGSG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 NESHVGHDHLALPSVRSPYPSLNRSASYHAGLTQEYTPEMELWNTTTSSLSSSPGPFCHVSNGSG 310 320 330 340 350 360

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