◆◆◆RE_0619 detail◆◆◆

Code name	RE_0619
Locus	AT3G04070
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0229_アミノ酸配列70%以上一致
sequence	>RE_0619_1077bp ATGATAAGCAAGGATCCAAGATCGAGTTTACCTCCAGGGTTTCGATTTCATCCAACAGATGAAGAACTCATTCTCCATTACCTAAGGAAGAAAGTTTCCT CTTCCCCAGTCCCGCTTTCGATTATCGCCGATGTCGATATCTACAAATCCGATCCATGGGATTTACCAGCTAAGGCTCCATTTGGGGAGAAAGAGTGGTA TTTTTTCAGTCCGAGGGATAGGAAATATCCAAACGGAGCAAGACCAAACGGAGCAGCTGCGTCTGGATATTGGAAAGCAACCGGAACAGATAAATTGATT GCGGTACCAAATGGTGAAGGGTTTCATGAAAACATTGGTATAAAAAAAGCTCTTGTGTTTTATAGAGGAAAGCCTCCAAAAGGTGTTAAAACCAATTGGA TCATGCATGAATATCGTCTTGCCGATTCATTATCTCCCAAAAGAATTAACTCTTCTAGGAGCGGTGGTAGCGAAGTTAATAATAATTTTGGAGATAGGAA TTCTAAAGAATATTCGATGAGACTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAATCACACGCTTCATTGTCATCACCTGATGTTGCTTTGGTCACA AGCAATCAAGAGCATGAGGAAAATGACAACGAACCATTCGTAGACCGCGGAACCTTTTTGCCAAATTTGCAAAATGATCAACCCCTTAAACGCCAGAAGT CTTCTTGTTCGTTCTCAAACTTACTAGACGCTACAGATTTGACGTTTCTCGCAAATTTTCTAAACGAAACCCCGGAAAATCGTTCTGAATCAGATTTTTC TTTCATGATTGGCAATTTCTCTAATCCTGACATTTACGGAAACCATTACTTGGATCAGAAGTTACCGCAGTTGAGCTCTCCCACTTCAGAGACAAGCGGC ATCGGAAGCAAAAGAGAGAGAGTGGATTTTGCGGAAGAAACGATAAACGCTTCGAAGAAGATGATGAACACATATAGTTACAATAATAGTATAGATCAAA TGGATCATAGTATGATGCAACAACCTAGTTTCCTGAACCAGGAACTCATGATGAGTTCTCACCTTCAATATCAAGGC >RE_0619_translated MISKDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEWYFFSPRDRKYPNGARPNGAAASGYWKATGTDKLI AVPNGEGFHENIGIKKALVFYRGKPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSMRLDDWVLCRIYKKSHASLSSPDVALVT SNQEHEENDNEPFVDRGTFLPNLQNDQPLKRQKSSCSFSNLLDATDLTFLANFLNETPENRSESDFSFMIGNFSNPDIYGNHYLDQKLPQLSSPTSETSG IGSKRERVDFAEETINASKKMMNTYSYNNSIDQMDHSMMQQPSFLNQELMMSSHLQYQG
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1076/1077 (99.9%)（アミノ酸配列で358/359 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G04 ATGATAAGCAAGGATCCAAGATCGAGTTTACCTCCAGGGTTTCGATTTCATCCAACAGATGAAGAACTCATTCTCCATTACCTAAGGAAGAAAGTTTCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 ATGATAAGCAAGGATCCAAGATCGAGTTTACCTCCAGGGTTTCGATTTCATCCAACAGATGAAGAACTCATTCTCCATTACCTAAGGAAGAAAGTTTCCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G04 CTTCCCCAGTCCCGCTTTCGATTATCGCCGATGTCGATATCTACAAATCCGATCCATGGGATTTACCAGCTAAGGCTCCATTTGGGGAGAAAGAGTGGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 CTTCCCCAGTCCCGCTTTCGATTATCGCCGATGTCGATATCTACAAATCCGATCCATGGGATTTACCAGCTAAGGCTCCATTTGGGGAGAAAGAGTGGTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G04 TTTTTTCAGTCCGAGGGATAGGAAATATCCAAACGGAGCAAGACCAAACAGAGCAGCTGCGTCTGGATATTGGAAAGCAACCGGAACAGATAAATTGATT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 TTTTTTCAGTCCGAGGGATAGGAAATATCCAAACGGAGCAAGACCAAACGGAGCAGCTGCGTCTGGATATTGGAAAGCAACCGGAACAGATAAATTGATT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G04 GCGGTACCAAATGGTGAAGGGTTTCATGAAAACATTGGTATAAAAAAAGCTCTTGTGTTTTATAGAGGAAAGCCTCCAAAAGGTGTTAAAACCAATTGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 GCGGTACCAAATGGTGAAGGGTTTCATGAAAACATTGGTATAAAAAAAGCTCTTGTGTTTTATAGAGGAAAGCCTCCAAAAGGTGTTAAAACCAATTGGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G04 TCATGCATGAATATCGTCTTGCCGATTCATTATCTCCCAAAAGAATTAACTCTTCTAGGAGCGGTGGTAGCGAAGTTAATAATAATTTTGGAGATAGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 TCATGCATGAATATCGTCTTGCCGATTCATTATCTCCCAAAAGAATTAACTCTTCTAGGAGCGGTGGTAGCGAAGTTAATAATAATTTTGGAGATAGGAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G04 TTCTAAAGAATATTCGATGAGACTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAATCACACGCTTCATTGTCATCACCTGATGTTGCTTTGGTCACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 TTCTAAAGAATATTCGATGAGACTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAATCACACGCTTCATTGTCATCACCTGATGTTGCTTTGGTCACA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G04 AGCAATCAAGAGCATGAGGAAAATGACAACGAACCATTCGTAGACCGCGGAACCTTTTTGCCAAATTTGCAAAATGATCAACCCCTTAAACGCCAGAAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 AGCAATCAAGAGCATGAGGAAAATGACAACGAACCATTCGTAGACCGCGGAACCTTTTTGCCAAATTTGCAAAATGATCAACCCCTTAAACGCCAGAAGT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G04 CTTCTTGTTCGTTCTCAAACTTACTAGACGCTACAGATTTGACGTTTCTCGCAAATTTTCTAAACGAAACCCCGGAAAATCGTTCTGAATCAGATTTTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 CTTCTTGTTCGTTCTCAAACTTACTAGACGCTACAGATTTGACGTTTCTCGCAAATTTTCTAAACGAAACCCCGGAAAATCGTTCTGAATCAGATTTTTC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G04 TTTCATGATTGGCAATTTCTCTAATCCTGACATTTACGGAAACCATTACTTGGATCAGAAGTTACCGCAGTTGAGCTCTCCCACTTCAGAGACAAGCGGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 TTTCATGATTGGCAATTTCTCTAATCCTGACATTTACGGAAACCATTACTTGGATCAGAAGTTACCGCAGTTGAGCTCTCCCACTTCAGAGACAAGCGGC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G04 ATCGGAAGCAAAAGAGAGAGAGTGGATTTTGCGGAAGAAACGATAAACGCTTCGAAGAAGATGATGAACACATATAGTTACAATAATAGTATAGATCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 ATCGGAAGCAAAAGAGAGAGAGTGGATTTTGCGGAAGAAACGATAAACGCTTCGAAGAAGATGATGAACACATATAGTTACAATAATAGTATAGATCAAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 AT3G04 TGGATCATAGTATGATGCAACAACCTAGTTTCCTGAACCAGGAACTCATGATGAGTTCTCACCTTCAATATCAAGGC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 TGGATCATAGTATGATGCAACAACCTAGTTTCCTGAACCAGGAACTCATGATGAGTTCTCACCTTCAATATCAAGGC 1010 1020 1030 1040 1050 1060 1070 10 20 30 40 50 60 70 80 90 100 AT3G04 MISKDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: RE_061 MISKDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEWYFFSPRDRKYPNGARPNGAAASGYWKATGTDKLI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G04 AVPNGEGFHENIGIKKALVFYRGKPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSMRLDDWVLCRIYKKSHASLSSPDVALVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 AVPNGEGFHENIGIKKALVFYRGKPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSMRLDDWVLCRIYKKSHASLSSPDVALVT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G04 SNQEHEENDNEPFVDRGTFLPNLQNDQPLKRQKSSCSFSNLLDATDLTFLANFLNETPENRSESDFSFMIGNFSNPDIYGNHYLDQKLPQLSSPTSETSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 SNQEHEENDNEPFVDRGTFLPNLQNDQPLKRQKSSCSFSNLLDATDLTFLANFLNETPENRSESDFSFMIGNFSNPDIYGNHYLDQKLPQLSSPTSETSG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 AT3G04 IGSKRERVDFAEETINASKKMMNTYSYNNSIDQMDHSMMQQPSFLNQELMMSSHLQYQG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_061 IGSKRERVDFAEETINASKKMMNTYSYNNSIDQMDHSMMQQPSFLNQELMMSSHLQYQG 310 320 330 340 350

このページのTOPに戻る