◆◆◆RE_0628 detail◆◆◆

Code name	RE_0628
Locus	AT3G15510
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列97.00%一致
comment	0520_third_0628_FRW1_225
sequence	>RE_0628_1092bp ATGGAGAGCACCGATTCTTCCGGTGGTCCACCACCGCCACAACCTAACCTTCCTCCAGGCTTCCGGTTTCACCCTACCGACGAAGAGCTTGTTGTTCACT ACCTCAAACGCAAAGCAGCCTCTGCTCCTTTACCTGTCGCCATCATCGCCGAAGTCGATCTCTATAAATTTGATCCATGGGAACTTCCCGCTAAAGCATC GTTTGGAGAACAAGAATGGTACTTCTTTAGTCCACGAGATCGGAAGTATCCAAACGGAGCAAGACCAAACAGAGCGGCGACTTCAGGTTATTGGAAAGCG ACCGGTACAGATAAACCGGTACTTGCTTCCGACGGTAACCAAAAGGTGGGCGTGAAGAAGGCACTAGTCTTCTACAGTGGTAAACCACCAAAAGGCGTTA AAAGTGATTGGATCATGCATGAGTATCGTCTCATCGAAAACAAACCAAACAATCGACCTCCTGGCTGTGATTTCGGCAACAAAAAAAACTCACTCAGACT TGATGATTGGGTGTTATGTAGAATCTACAAGAAGAACAACGCAAGTCGACATGTTGATAACGATAAGGATCATGATATGATCGATTACATTTTCAGGAAG ATTCCTCCGTCTTTATCAATGGCGGCTGCTTCTACAGGACTTCACCAACATCATCATAATGTCTCAAGATCAATGAATTTCTTCCCTGGCAAATTCTCCG GTGGTGGTTACGGGATTTTCTCTGACGGTGGTAACACGAGTATATACGACGGCGGTGGCATGATCAACAATATTGGTACTGACTCAGTAGATCACGACAA TAACGCTGACGTCGTTGGTTGTGATCATGAGAGATCGTCAGGCATTATGATGATGGCGAATTTGAAACGAACTCTCCGGGTGCCGTGTTGGCCTGTAGCA GATGAGGAGCAAGATGCATCTCCGAGCAAACGGTTTCACGGTGTAGGAGGAGGAGGAGGAGATTGTTCGAACATGTGTTACTTCAGGATGGAAGAGACTC CACCATTGATGCAACAACAAGGTGGTGTGTTAGGAGATGGATTATTCAGAACGACATCGTACCAATTACCCGGTTTAAATTGGTACTCTTCT >RE_0628_translated MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKA TGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVDNDKDHDMIDYIFRK IPPSLSMAAASTGLHQHHHNVSRSMNFFPGKFSGGGYGIFSDGGNTSIYDGGGMINNIGTDSVDHDNNADVVGCDHERSSGIMMMANLKRTLRVPCWPVA DEEQDASPSKRFHGVGGGGGDCSNMCYFRMEETPPLMQQQGGVLGDGLFRTTSYQLPGLNWYSS
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1075/1092 (98.4%)（アミノ酸配列で353/364 (97.0%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G15 ATGGAGAGCACCGATTCTTCCGGTGGTCCACCACCGCCACAACCTAACCTTCCTCCAGGCTTCCGGTTTCACCCTACCGACGAAGAGCTTGTTGTTCACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 ATGGAGAGCACCGATTCTTCCGGTGGTCCACCACCGCCACAACCTAACCTTCCTCCAGGCTTCCGGTTTCACCCTACCGACGAAGAGCTTGTTGTTCACT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G15 ACCTCAAACGCAAAGCAGCCTCTGCTCCTTTACCTGTCGCCATCATCGCCGAAGTCGATCTCTATAAATTTGATCCATGGGAACTTCCCGCTAAAGCATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 ACCTCAAACGCAAAGCAGCCTCTGCTCCTTTACCTGTCGCCATCATCGCCGAAGTCGATCTCTATAAATTTGATCCATGGGAACTTCCCGCTAAAGCATC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G15 GTTTGGAGAACAAGAATGGTACTTCTTTAGTCCACGAGATCGGAAGTATCCAAACGGAGCAAGACCAAACAGAGCGGCGACTTCAGGTTATTGGAAAGCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 GTTTGGAGAACAAGAATGGTACTTCTTTAGTCCACGAGATCGGAAGTATCCAAACGGAGCAAGACCAAACAGAGCGGCGACTTCAGGTTATTGGAAAGCG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G15 ACCGGTACAGATAAACCGGTACTTGCTTCCGACGGTAACCAAAAGGTGGGCGTGAAGAAGGCACTAGTCTTCTACAGTGGTAAACCACCAAAAGGCGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 ACCGGTACAGATAAACCGGTACTTGCTTCCGACGGTAACCAAAAGGTGGGCGTGAAGAAGGCACTAGTCTTCTACAGTGGTAAACCACCAAAAGGCGTTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G15 AAAGTGATTGGATCATGCATGAGTATCGTCTCATCGAAAACAAACCAAACAATCGACCTCCTGGCTGTGATTTCGGCAACAAAAAAAACTCACTCAGACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 AAAGTGATTGGATCATGCATGAGTATCGTCTCATCGAAAACAAACCAAACAATCGACCTCCTGGCTGTGATTTCGGCAACAAAAAAAACTCACTCAGACT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G15 TGATGATTGGGTGTTATGTAGAATCTACAAGAAGAACAACGCAAGTCGACATGTTGATAACGATAAGGATCATGATATGATCGATTACATTTTCAGGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 TGATGATTGGGTGTTATGTAGAATCTACAAGAAGAACAACGCAAGTCGACATGTTGATAACGATAAGGATCATGATATGATCGATTACATTTTCAGGAAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G15 ATTCCTCCGTCTTTATCAATGGCGGCTGCTTCTACAGGACTTCACCAACATCATCATAATGTCTCAAGATCAATGAATTTCTTCCCTGGCAAATTCTCCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 ATTCCTCCGTCTTTATCAATGGCGGCTGCTTCTACAGGACTTCACCAACATCATCATAATGTCTCAAGATCAATGAATTTCTTCCCTGGCAAATTCTCCG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G15 GTGGTGGTTACGGGATTTTCTCTGACGGTGGTAACACGAGTATATACGACGGCGGTGGCATGATCAACAATATTGGTACTGACTCAGTAGATCACGACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 GTGGTGGTTACGGGATTTTCTCTGACGGTGGTAACACGAGTATATACGACGGCGGTGGCATGATCAACAATATTGGTACTGACTCAGTAGATCACGACAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G15 TAACGCTGACGTCGTTGGTTTAAATCATGCTTCGTCGTCAGGTCCTATGATGATGGCGAATTTGAAACGAACTCTCCCGGTGCCGTATTGGCCTGTAGCA :::::::::::::::::::: :::::: :::::::: :::::::::::::::::::::::::::::::: :::::::: ::::::::::::: RE_062 TAACGCTGACGTCGTTGGTTGTGATCATGAGAGATCGTCAGGCATTATGATGATGGCGAATTTGAAACGAACTCTCCGGGTGCCGTGTTGGCCTGTAGCA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G15 GATGAGGAGCAAGATGCATCTCCGAGCAAACGGTTTCACGGTGTAGGAGGAGGAGGAGGAGATTGTTCGAACATGTCTTCCTCCATGATGGAAGAGACTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: :: :: :::::::::::::: RE_062 GATGAGGAGCAAGATGCATCTCCGAGCAAACGGTTTCACGGTGTAGGAGGAGGAGGAGGAGATTGTTCGAACATGTGTTACTTCAGGATGGAAGAGACTC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 AT3G15 CACCATTGATGCAACAACAAGGTGGTGTGTTAGGAGATGGATTATTCAGAACGACATCGTACCAATTACCCGGTTTAAATTGGTACTCTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 CACCATTGATGCAACAACAAGGTGGTGTGTTAGGAGATGGATTATTCAGAACGACATCGTACCAATTACCCGGTTTAAATTGGTACTCTTCT 1010 1020 1030 1040 1050 1060 1070 1080 1090 10 20 30 40 50 60 70 80 90 100 AT3G15 MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G15 TGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVDNDKDHDMIDYIFRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_062 TGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVDNDKDHDMIDYIFRK 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G15 IPPSLSMAAASTGLHQHHHNVSRSMNFFPGKFSGGGYGIFSDGGNTSIYDGGGMINNIGTDSVDHDNNADVVGLNHASSSGPMMMANLKRTLPVPYWPVA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: .: ::: :::::::::: :: :::: RE_062 IPPSLSMAAASTGLHQHHHNVSRSMNFFPGKFSGGGYGIFSDGGNTSIYDGGGMINNIGTDSVDHDNNADVVGCDHERSSGIMMMANLKRTLRVPCWPVA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 AT3G15 DEEQDASPSKRFHGVGGGGGDCSNMSSSMMEETPPLMQQQGGVLGDGLFRTTSYQLPGLNWYSS ::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: RE_062 DEEQDASPSKRFHGVGGGGGDCSNMCYFRMEETPPLMQQQGGVLGDGLFRTTSYQLPGLNWYSS 310 320 330 340 350 360

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