◆◆◆RE_0630 detail◆◆◆

Code name	RE_0630
Locus	AT3G18400
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0229_アミノ酸配列100%一致
sequence	>RE_0630_942bp ATGGAAGAAAATCTTCCTCCGGGGTTCAGATTTCATCCTACAGACGAGGAGCTCATAACGCATTATCTATGTCGGAAAGTCTCCGATATAGGATTCACCG GTAAAGCTGTCGTCGACGTTGATCTCAACAAGTGTGAACCTTGGGATTTGCCGGCCAAGGCTTCAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCAAAG GGATCGGAAATATCCAACCGGTTTAAGAACAAACCGGGCAACAGAAGCTGGTTACTGGAAAACCACCGGGAAAGATAAAGAAATATACCGAAGTGGAGTG TTGGTTGGGATGAAGAAAACTCTAGTTTTCTACAAAGGAAGAGCTCCCAAAGGTGAGAAAAGCAATTGGGTTATGCATGAGTACAGGCTTGAGAGCAAAC AACCTTTCAACCCCACGAATAAGGAGGAATGGGTAGTGTGTAGGGTTTTCGAAAAGAGCACGGCAGCAAAGAAAGCACAAGAACAACAACCTCAATCTTC TCAACCATCTTTTGGATCTCCATGCGATGCAAACTCATCAATGGCAAATGAGTTTGAAGATATTGATGAGCTTCCGAATCTGAATTCAAACTCATCAACC ATCGATTACAATAATCATATCCATCAATATTCGCAACGCAATGTTTACTCAGAAGACAACACAACAAGTACGGCTGGTCTCAACATGAACATGAACATGG CTAGTACTAATCTTCAGTCTTGGACAACAAGTCTCCTTGGTCCGCCTTTATCTCCAATCAACTCTTTGTTGCTCAAGGCTTTCCAAATCAGGAACTCTTA TAGTTTCCCAAAAGAGATGATCCCCAGTTTCAATCATTCTTCTCTTCAACAAGGAGTCTCCAATATGATCCAAAATGCTTCAAGTTCGTCTCAAGTGCAA CCCCAACCGCAAGAGGAAGCGTTTAATATGGACTCCATATGG >RE_0630_translated MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSSMANEFEDIDELPNLNSNSST IDYNNHIHQYSQRNVYSEDNTTSTAGLNMNMNMASTNLQSWTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQQGVSNMIQNASSSSQVQ PQPQEEAFNMDSIW
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 940/942 (99.8%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G18 ATGGAAGAAAATCTTCCTCCGGGGTTCAGATTTCATCCTACAGACGAGGAGCTCATAACGCATTATCTATGTCGGAAAGTCTCCGATATAGGATTCACCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 ATGGAAGAAAATCTTCCTCCGGGGTTCAGATTTCATCCTACAGACGAGGAGCTCATAACGCATTATCTATGTCGGAAAGTCTCCGATATAGGATTCACCG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G18 GTAAAGCTGTCGTCGACGTTGATCTCAACAAGTGTGAACCTTGGGATTTGCCAGCCAAGGCTTCAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: RE_063 GTAAAGCTGTCGTCGACGTTGATCTCAACAAGTGTGAACCTTGGGATTTGCCGGCCAAGGCTTCAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCAAAG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G18 GGATCGGAAATATCCAACCGGTTTAAGAACAAACCGGGCAACAGAAGCTGGTTACTGGAAAACCACCGGGAAAGATAAAGAAATATACCGAAGTGGAGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 GGATCGGAAATATCCAACCGGTTTAAGAACAAACCGGGCAACAGAAGCTGGTTACTGGAAAACCACCGGGAAAGATAAAGAAATATACCGAAGTGGAGTG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G18 TTGGTTGGGATGAAGAAAACCCTAGTTTTCTACAAAGGAAGAGCTCCCAAAGGTGAGAAAAGCAATTGGGTTATGCATGAGTACAGGCTTGAGAGCAAAC :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 TTGGTTGGGATGAAGAAAACTCTAGTTTTCTACAAAGGAAGAGCTCCCAAAGGTGAGAAAAGCAATTGGGTTATGCATGAGTACAGGCTTGAGAGCAAAC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G18 AACCTTTCAACCCCACGAATAAGGAGGAATGGGTAGTGTGTAGGGTTTTCGAAAAGAGCACGGCAGCAAAGAAAGCACAAGAACAACAACCTCAATCTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 AACCTTTCAACCCCACGAATAAGGAGGAATGGGTAGTGTGTAGGGTTTTCGAAAAGAGCACGGCAGCAAAGAAAGCACAAGAACAACAACCTCAATCTTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G18 TCAACCATCTTTTGGATCTCCATGCGATGCAAACTCATCAATGGCAAATGAGTTTGAAGATATTGATGAGCTTCCGAATCTGAATTCAAACTCATCAACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 TCAACCATCTTTTGGATCTCCATGCGATGCAAACTCATCAATGGCAAATGAGTTTGAAGATATTGATGAGCTTCCGAATCTGAATTCAAACTCATCAACC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G18 ATCGATTACAATAATCATATCCATCAATATTCGCAACGCAATGTTTACTCAGAAGACAACACAACAAGTACGGCTGGTCTCAACATGAACATGAACATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 ATCGATTACAATAATCATATCCATCAATATTCGCAACGCAATGTTTACTCAGAAGACAACACAACAAGTACGGCTGGTCTCAACATGAACATGAACATGG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G18 CTAGTACTAATCTTCAGTCTTGGACAACAAGTCTCCTTGGTCCGCCTTTATCTCCAATCAACTCTTTGTTGCTCAAGGCTTTCCAAATCAGGAACTCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 CTAGTACTAATCTTCAGTCTTGGACAACAAGTCTCCTTGGTCCGCCTTTATCTCCAATCAACTCTTTGTTGCTCAAGGCTTTCCAAATCAGGAACTCTTA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G18 TAGTTTCCCAAAAGAGATGATCCCCAGTTTCAATCATTCTTCTCTTCAACAAGGAGTCTCCAATATGATCCAAAATGCTTCAAGTTCGTCTCAAGTGCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 TAGTTTCCCAAAAGAGATGATCCCCAGTTTCAATCATTCTTCTCTTCAACAAGGAGTCTCCAATATGATCCAAAATGCTTCAAGTTCGTCTCAAGTGCAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 AT3G18 CCCCAACCGCAAGAGGAAGCGTTTAATATGGACTCCATATGG :::::::::::::::::::::::::::::::::::::::::: RE_063 CCCCAACCGCAAGAGGAAGCGTTTAATATGGACTCCATATGG 910 920 930 940 10 20 30 40 50 60 70 80 90 100 AT3G18 MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKEWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G18 LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSSMANEFEDIDELPNLNSNSST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSSMANEFEDIDELPNLNSNSST 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G18 IDYNNHIHQYSQRNVYSEDNTTSTAGLNMNMNMASTNLQSWTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQQGVSNMIQNASSSSQVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 IDYNNHIHQYSQRNVYSEDNTTSTAGLNMNMNMASTNLQSWTTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQQGVSNMIQNASSSSQVQ 210 220 230 240 250 260 270 280 290 300 310 AT3G18 PQPQEEAFNMDSIW :::::::::::::: RE_063 PQPQEEAFNMDSIW 310

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