◆◆◆RE_0631 detail◆◆◆

Code name	RE_0631
Locus	AT3G29035
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0229_アミノ酸配列70%以上一致
sequence	>RE_0631_954bp ATGGATTACAAGGTATCAAGAAGTGGGGAGATAGTAGAAGGAGAAGTAGAAGATTCAGAAAAGATTGATTTACCACCTGGTTTCAGATTTCACCCAACTG ATGAAGAACTTATAACACACTATCTAAGACCAAAGGTTGTAAACTCTTTTTTCTCTGCTATAGCTATTGGTGAAGTTGATCTCAACAAAGTCGAGCCTTG GGACTTGCCTTGGAAGGCTAAGCTTGGGGAAAAAGAGTGGTACTTCTTTTGCGTAAGAGACCGAAAATACCCGACTGGTTTAAGAACGAATCGTGCTACT AAAGCCGGTTATTGGAAAGCTACAGGGAAAGATAAAGAGATCTTCAAAGGGAAGTCTCTTGTTGGTATGAAGAAAACATTGGTTTTCTACAAAGGAAGAG CTCCTAAAGGAGTAAAAACAAATTGGGTCATGCATGAGTATCGATTAGAAGGCAAATTCGCTATCGATAATCTCTCTAAAACCGCTAAGAACGAATGTGT TATTAGTCGTGTTTTTCATACACGGACTGATGGTACGAAGGAGCATATGTCCGTTGGTTTACCTCCGCTGATGGATTCTTCTCCATATCTAAAGAGTAGA GGACAAGACTCTTTAGCCGGGACCACCCTTGGTGGGTTGTTGTCTCACGTTACCTACTTCTCCGACCAAACAACCGATGACAAGAGTCTTGTGGCCGATT TTAAAACTACCATGTTTGGTTCCGGATCGACTAACTTTTTACCAAACATAGGTTCTCTACTAGACTTCGATCCTCTGTTTCTACAAAACAATTCTTCAGT ACTGAAGATGTTGCTTGACAATGAAGAAGCCCAATTTAAGAGGAATCTTCACAATTCAGGTTCATCAGAGAGTGAACTAACAGCGAGTTCTTGGCAAGGT CACAATTCTTATGGTTCCACTGGTCCAGTGAATCTTGATTGCGTTTGGAAATTC >RE_0631_translated MDYKVSRSGEIVEGEVEDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRAT KAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFHTRTDGTKEHMSVGLPPLMDSSPYLKSR GQDSLAGTTLGGLLSHVTYFSDQTTDDKSLVADFKTTMFGSGSTNFLPNIGSLLDFDPLFLQNNSSVLKMLLDNEEAQFKRNLHNSGSSESELTASSWQG HNSYGSTGPVNLDCVWKF
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 951/954 (99.7%)（アミノ酸配列で316/318 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G29 ATGGATTACAAGGTATCAAGAAGTGGGGAGATAGTAGAAGGAGAAGTAGAAGATTCAGAAAAGATTGATTTACCACCTGGTTTCAGATTTCACCCAACTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 ATGGATTACAAGGTATCAAGAAGTGGGGAGATAGTAGAAGGAGAAGTAGAAGATTCAGAAAAGATTGATTTACCACCTGGTTTCAGATTTCACCCAACTG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G29 ATGAAGAACTTATAACACACTATCTAAGACCAAAGGTTGTAAACTCTTTTTTCTCTGCTATAGCTATTGGTGAAGTTGATCTCAACAAAGTCGAGCCTTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 ATGAAGAACTTATAACACACTATCTAAGACCAAAGGTTGTAAACTCTTTTTTCTCTGCTATAGCTATTGGTGAAGTTGATCTCAACAAAGTCGAGCCTTG 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G29 GGACTTGCCTTGGAAGGCTAAGCTTGGGGAAAAAGAGTGGTACTTCTTTTGCGTAAGAGACCGAAAATACCCGACTGGTTTAAGAACGAATCGTGCTACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 GGACTTGCCTTGGAAGGCTAAGCTTGGGGAAAAAGAGTGGTACTTCTTTTGCGTAAGAGACCGAAAATACCCGACTGGTTTAAGAACGAATCGTGCTACT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G29 AAAGCCGGTTATTGGAAAGCTACAGGGAAAGATAAAGAGATCTTCAAAGGGAAATCTCTTGTTGGTATGAAGAAAACATTGGTTTTCTACAAAGGAAGAG ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: RE_063 AAAGCCGGTTATTGGAAAGCTACAGGGAAAGATAAAGAGATCTTCAAAGGGAAGTCTCTTGTTGGTATGAAGAAAACATTGGTTTTCTACAAAGGAAGAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G29 CTCCTAAAGGAGTAAAAACAAATTGGGTCATGCATGAGTATCGATTAGAAGGCAAATTCGCTATCGATAATCTCTCTAAAACCGCTAAGAACGAATGTGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 CTCCTAAAGGAGTAAAAACAAATTGGGTCATGCATGAGTATCGATTAGAAGGCAAATTCGCTATCGATAATCTCTCTAAAACCGCTAAGAACGAATGTGT 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G29 TATTAGTCGTGTTTTTCATACACGGACTGATGGTACGAAGGAGCATATGTCCGTTGGTTTACCTCCGCTGATGGATTCTTCTCCATATCTAAAGAGTAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 TATTAGTCGTGTTTTTCATACACGGACTGATGGTACGAAGGAGCATATGTCCGTTGGTTTACCTCCGCTGATGGATTCTTCTCCATATCTAAAGAGTAGA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G29 GGACAAGACTCTTTAGCCGGGACCACCCTTGGTGGGTTGTTGTCTCACGTTACCTACTTCTCCGACCAAACAACCGATGACAAGAGTCTTGTGGCCGATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 GGACAAGACTCTTTAGCCGGGACCACCCTTGGTGGGTTGTTGTCTCACGTTACCTACTTCTCCGACCAAACAACCGATGACAAGAGTCTTGTGGCCGATT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G29 TTAAAACTACCATGTTTGGTTCCGGATCGACTAACTTTTTACCAAACATAGGTTCTCTACTAGACTTCGATCCTCTGTTTCTACAAAACAATTCTTCAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 TTAAAACTACCATGTTTGGTTCCGGATCGACTAACTTTTTACCAAACATAGGTTCTCTACTAGACTTCGATCCTCTGTTTCTACAAAACAATTCTTCAGT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G29 ACTGAAGATGTTGCTTGACAATGAAGAAACCCAATTTAAGAAGAATCTTCACAATTCAGGTTCATCAGAGAGTGAACTAACAGCGAGTTCTTGGCAAGGT :::::::::::::::::::::::::::: :::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 ACTGAAGATGTTGCTTGACAATGAAGAAGCCCAATTTAAGAGGAATCTTCACAATTCAGGTTCATCAGAGAGTGAACTAACAGCGAGTTCTTGGCAAGGT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 AT3G29 CACAATTCTTATGGTTCCACTGGTCCAGTGAATCTTGATTGCGTTTGGAAATTC :::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 CACAATTCTTATGGTTCCACTGGTCCAGTGAATCTTGATTGCGTTTGGAAATTC 910 920 930 940 950 10 20 30 40 50 60 70 80 90 100 AT3G29 MDYKVSRSGEIVEGEVEDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 MDYKVSRSGEIVEGEVEDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKAKLGEKEWYFFCVRDRKYPTGLRTNRAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G29 KAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFHTRTDGTKEHMSVGLPPLMDSSPYLKSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_063 KAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGVKTNWVMHEYRLEGKFAIDNLSKTAKNECVISRVFHTRTDGTKEHMSVGLPPLMDSSPYLKSR 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G29 GQDSLAGTTLGGLLSHVTYFSDQTTDDKSLVADFKTTMFGSGSTNFLPNIGSLLDFDPLFLQNNSSVLKMLLDNEETQFKKNLHNSGSSESELTASSWQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::.::::::::::::::::::: RE_063 GQDSLAGTTLGGLLSHVTYFSDQTTDDKSLVADFKTTMFGSGSTNFLPNIGSLLDFDPLFLQNNSSVLKMLLDNEEAQFKRNLHNSGSSESELTASSWQG 210 220 230 240 250 260 270 280 290 300 310 AT3G29 HNSYGSTGPVNLDCVWKF :::::::::::::::::: RE_063 HNSYGSTGPVNLDCVWKF 310

このページのTOPに戻る