◆◆◆RE_0642 detail◆◆◆

Code name	RE_0642
Locus	AT4G36160
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0520_20080115_0642_FRW1_555
sequence	>RE_0642_1131bp ATGGAATCGGTGGATCAATCATGTAGTGTTCCTCCGGGATTCAGATTCCATCCAACAGATGAAGGGCTCGTTGGTTACTATTTAAGGAAAAAAGTTGCAT CGCAAAAGATCGATCTTGATGTCATAAGAGATATTGATCTCTACAGAATCGAACCATGGGATTTACAAGAGAGCTGCCGAATCGGATATGAGGAAAGAAA TGAATGGTATTTCTTCAGCCACAAAGATAAGAAATATCCAACAGGAACAAGAACAAACAGAGCGACCATGGCTGGGTTTTGGAAAGCCACGGGCCGAGAC AAGGCTGTTTACGACAAGTCAAAACTGATTGGTATGAGAAAAACACTTGTGTTCTACAAAGGAAGAGCCCCTAATGGCCAAAAAACCGATTGGATCATGC ATGAATACCGGCTAGAGTCAGATGAGAATGCACCTCCTCAGGAAGAAGGGTGGGTGGTTTGTAGAGCGTTCAAGAAAAAGCCAATGACCGGGCAAGCCAA GAACACAGAAACTTGGAGCTCAAGTTACTTTTACGACGAATTACCGAGTGGAGTACGCTCAGTTACGGAGCCTCTTAACTACGTATCTAAGCAGAAACAA AACGTTTTTGCACAAGATTTAATGTTCAAGCAAGAACTAGAAGGATCAGATATCGGTTTAAACTTCATCCACTGCGATCAATTCATTCAACTTCCGCAGC TTGAAAGCCCTTCACTCCCTCTTACCAAAAGACCAGTGAGCTTGACGTCAATTACATCATTGGAGAAGAATAAAAATATCTACAAAAGACATTTAATAGA AGAGGATGTGAGCTTCAATGCGCTAATAAGTAGTGGAAATAAAGATAAGAAGAAGAAGAAAACATCAGTGATGACGACGGATTGGAGAGCACTCGATAAA TTTGTTGCTTCTCAACTTATGAGCCAAGAAGATGGAGTTTCGGGTTTTGGAGGTCATCATGAAGAAGATAACAATAAAATCGGTCATTACAATAACGAAG AGAGCAATAACAAGGGATCAGTAGAGACTGCTTCTTCCACGTTATTGAGTGATAGAGAAGAAGAGAACAGATTCATCAGTGGATTATTGTGTTCCAACTT GGACTATGACTTATATAGGGATTTACATGTT >RE_0642_translated MESVDQSCSVPPGFRFHPTDEGLVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRD KAVYDKSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKPMTGQAKNTETWSSSYFYDELPSGVRSVTEPLNYVSKQKQ NVFAQDLMFKQELEGSDIGLNFIHCDQFIQLPQLESPSLPLTKRPVSLTSITSLEKNKNIYKRHLIEEDVSFNALISSGNKDKKKKKTSVMTTDWRALDK FVASQLMSQEDGVSGFGGHHEEDNNKIGHYNNEESNNKGSVETASSTLLSDREEENRFISGLLCSNLDYDLYRDLHV
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1130/1131 (99.9%)（アミノ酸配列で376/377 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G36 ATGGAATCGGTGGATCAATCATGTAGTGTTCCTCCGGGATTCAGATTCCATCCAACAGATGAAGAGCTCGTTGGTTACTATTTAAGGAAAAAAGTTGCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: RE_064 ATGGAATCGGTGGATCAATCATGTAGTGTTCCTCCGGGATTCAGATTCCATCCAACAGATGAAGGGCTCGTTGGTTACTATTTAAGGAAAAAAGTTGCAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G36 CGCAAAAGATCGATCTTGATGTCATAAGAGATATTGATCTCTACAGAATCGAACCATGGGATTTACAAGAGAGCTGCCGAATCGGATATGAGGAAAGAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 CGCAAAAGATCGATCTTGATGTCATAAGAGATATTGATCTCTACAGAATCGAACCATGGGATTTACAAGAGAGCTGCCGAATCGGATATGAGGAAAGAAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G36 TGAATGGTATTTCTTCAGCCACAAAGATAAGAAATATCCAACAGGAACAAGAACAAACAGAGCGACCATGGCTGGGTTTTGGAAAGCCACGGGCCGAGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 TGAATGGTATTTCTTCAGCCACAAAGATAAGAAATATCCAACAGGAACAAGAACAAACAGAGCGACCATGGCTGGGTTTTGGAAAGCCACGGGCCGAGAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G36 AAGGCTGTTTACGACAAGTCAAAACTGATTGGTATGAGAAAAACACTTGTGTTCTACAAAGGAAGAGCCCCTAATGGCCAAAAAACCGATTGGATCATGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AAGGCTGTTTACGACAAGTCAAAACTGATTGGTATGAGAAAAACACTTGTGTTCTACAAAGGAAGAGCCCCTAATGGCCAAAAAACCGATTGGATCATGC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G36 ATGAATACCGGCTAGAGTCAGATGAGAATGCACCTCCTCAGGAAGAAGGGTGGGTGGTTTGTAGAGCGTTCAAGAAAAAGCCAATGACCGGGCAAGCCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 ATGAATACCGGCTAGAGTCAGATGAGAATGCACCTCCTCAGGAAGAAGGGTGGGTGGTTTGTAGAGCGTTCAAGAAAAAGCCAATGACCGGGCAAGCCAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G36 GAACACAGAAACTTGGAGCTCAAGTTACTTTTACGACGAATTACCGAGTGGAGTACGCTCAGTTACGGAGCCTCTTAACTACGTATCTAAGCAGAAACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 GAACACAGAAACTTGGAGCTCAAGTTACTTTTACGACGAATTACCGAGTGGAGTACGCTCAGTTACGGAGCCTCTTAACTACGTATCTAAGCAGAAACAA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G36 AACGTTTTTGCACAAGATTTAATGTTCAAGCAAGAACTAGAAGGATCAGATATCGGTTTAAACTTCATCCACTGCGATCAATTCATTCAACTTCCGCAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AACGTTTTTGCACAAGATTTAATGTTCAAGCAAGAACTAGAAGGATCAGATATCGGTTTAAACTTCATCCACTGCGATCAATTCATTCAACTTCCGCAGC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G36 TTGAAAGCCCTTCACTCCCTCTTACCAAAAGACCAGTGAGCTTGACGTCAATTACATCATTGGAGAAGAATAAAAATATCTACAAAAGACATTTAATAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 TTGAAAGCCCTTCACTCCCTCTTACCAAAAGACCAGTGAGCTTGACGTCAATTACATCATTGGAGAAGAATAAAAATATCTACAAAAGACATTTAATAGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G36 AGAGGATGTGAGCTTCAATGCGCTAATAAGTAGTGGAAATAAAGATAAGAAGAAGAAGAAAACATCAGTGATGACGACGGATTGGAGAGCACTCGATAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AGAGGATGTGAGCTTCAATGCGCTAATAAGTAGTGGAAATAAAGATAAGAAGAAGAAGAAAACATCAGTGATGACGACGGATTGGAGAGCACTCGATAAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT4G36 TTTGTTGCTTCTCAACTTATGAGCCAAGAAGATGGAGTTTCGGGTTTTGGAGGTCATCATGAAGAAGATAACAATAAAATCGGTCATTACAATAACGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 TTTGTTGCTTCTCAACTTATGAGCCAAGAAGATGGAGTTTCGGGTTTTGGAGGTCATCATGAAGAAGATAACAATAAAATCGGTCATTACAATAACGAAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT4G36 AGAGCAATAACAAGGGATCAGTAGAGACTGCTTCTTCCACGTTATTGAGTGATAGAGAAGAAGAGAACAGATTCATCAGTGGATTATTGTGTTCCAACTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AGAGCAATAACAAGGGATCAGTAGAGACTGCTTCTTCCACGTTATTGAGTGATAGAGAAGAAGAGAACAGATTCATCAGTGGATTATTGTGTTCCAACTT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 AT4G36 GGACTATGACTTATATAGGGATTTACATGTT ::::::::::::::::::::::::::::::: RE_064 GGACTATGACTTATATAGGGATTTACATGTT 1110 1120 1130 10 20 30 40 50 60 70 80 90 100 AT4G36 MESVDQSCSVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRD ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 MESVDQSCSVPPGFRFHPTDEGLVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRD 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G36 KAVYDKSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKPMTGQAKNTETWSSSYFYDELPSGVRSVTEPLNYVSKQKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 KAVYDKSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKPMTGQAKNTETWSSSYFYDELPSGVRSVTEPLNYVSKQKQ 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G36 NVFAQDLMFKQELEGSDIGLNFIHCDQFIQLPQLESPSLPLTKRPVSLTSITSLEKNKNIYKRHLIEEDVSFNALISSGNKDKKKKKTSVMTTDWRALDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 NVFAQDLMFKQELEGSDIGLNFIHCDQFIQLPQLESPSLPLTKRPVSLTSITSLEKNKNIYKRHLIEEDVSFNALISSGNKDKKKKKTSVMTTDWRALDK 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 AT4G36 FVASQLMSQEDGVSGFGGHHEEDNNKIGHYNNEESNNKGSVETASSTLLSDREEENRFISGLLCSNLDYDLYRDLHV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 FVASQLMSQEDGVSGFGGHHEEDNNKIGHYNNEESNNKGSVETASSTLLSDREEENRFISGLLCSNLDYDLYRDLHV 310 320 330 340 350 360 370

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