◆◆◆RE_0644 detail◆◆◆

Code name	RE_0644
Locus	AT5G07680
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0520_20080115_0644_FR_55
sequence	>RE_0644_987bp ATGGAAACTTTCGGTGTGTTTCACAAGGAAGATGATGAGCAGATGGATTTGCCTCCTGGTTTTAGGTTTCATCCAACAGACGAAGAACTCATAACCCACT ATCTCCACAAGAAGGTTCTTGACCTTGGTTTCTCGGCTAAAGCTATTGGTGAGGTTGATTTGAGCAAAGCTGAGCCATGGGAGTTGCCATATAAAGCAAA AATTGGTGAGAAAGAATGGTACTTTTTCTGTGTGAGGGATAGAAAGTACCCGACTGGTCTGAGGACTAACCGAGCAACTCAAGCCGGTTATTGGAAGGCG ACAGGGAAGGATAAAGAGATCTTCCGAGGCAAATCGCTTGTTGGTATGAAGAAAACACTTGTTTTCTACAGAGGAAGAGCTCCTAAAGGCCAGAAAACAA ATTGGGTGATGCATGAGTATAGGCTAGATGGAAAACTCTCTGCTCACAACTTGCCTAAAACCGCTAAGAATGAATGGGTGATCTGCAGGGTATTTCATAA AACTGCTGGAGGTAAGAAGATCCCGATTTCGACGTTAATCCGAATCGGTTCTTACGGAACCGGGTCTAGTTTACCACCTTTAACTGATTCTTCACCATAC AACGACAAAACCAAGACCGAACCAGTTTACGTGCCCTGCTTCTCCAACCAAGCTGAAACTAGAGGAACAATACTCAATTGCTTCAGCAACCCTTCCCTTA GCTCCATCCAACCAGATTTTCTCCAGATGATTCCACTCTACCAACCTCAATCTCTCAACATTTCCGAGAGTTCCAATCCGGTTCTTACGCAAGAACAATC AGTTTTACAAGCGATGATGGAAAACAACAGAAGGCAGAACTTCAAAACATTGAGCATCTCGCAAGAAACCGGGGTTTCGAACACCGATAACTCATCGGTT TTTGAATTTGGGAGGAAGCGATTTGATCATCAAGAAGTTCCATCTCCCTCTTCCGGTCCGGTTGATCTTGAACCTTTCTGGAATTAC >RE_0644_translated METFGVFHKEDDEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLSKAEPWELPYKAKIGEKEWYFFCVRDRKYPTGLRTNRATQAGYWKA TGKDKEIFRGKSLVGMKKTLVFYRGRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGSSLPPLTDSSPY NDKTKTEPVYVPCFSNQAETRGTILNCFSNPSLSSIQPDFLQMIPLYQPQSLNISESSNPVLTQEQSVLQAMMENNRRQNFKTLSISQETGVSNTDNSSV FEFGRKRFDHQEVPSPSSGPVDLEPFWNY
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 985/987 (99.8%)（アミノ酸配列で328/329 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G07 ATGGAAACTTTCGGTGTGTTTCACAAGGAAGATGATGAGCAGATGGATTTGCCTCCTGGTTTTAGGTTTCATCCAACAGACGAAGAACTCATAACCCACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 ATGGAAACTTTCGGTGTGTTTCACAAGGAAGATGATGAGCAGATGGATTTGCCTCCTGGTTTTAGGTTTCATCCAACAGACGAAGAACTCATAACCCACT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G07 ATCTCCACAAGAAGGTTCTTGACCTTGGTTTCTCGGCTAAAGCTATTGGTGAGGTTGATTTGAACAAAGCTGAGCCATGGGAGTTGCCATATAAAGCAAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: RE_064 ATCTCCACAAGAAGGTTCTTGACCTTGGTTTCTCGGCTAAAGCTATTGGTGAGGTTGATTTGAGCAAAGCTGAGCCATGGGAGTTGCCATATAAAGCAAA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G07 AATTGGTGAGAAAGAATGGTACTTTTTCTGTGTGAGGGATAGAAAGTATCCGACTGGTCTGAGGACTAACCGAGCAACTCAAGCCGGTTATTGGAAGGCG :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AATTGGTGAGAAAGAATGGTACTTTTTCTGTGTGAGGGATAGAAAGTACCCGACTGGTCTGAGGACTAACCGAGCAACTCAAGCCGGTTATTGGAAGGCG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G07 ACAGGGAAGGATAAAGAGATCTTCCGAGGCAAATCGCTTGTTGGTATGAAGAAAACACTTGTTTTCTACAGAGGAAGAGCTCCTAAAGGCCAGAAAACAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 ACAGGGAAGGATAAAGAGATCTTCCGAGGCAAATCGCTTGTTGGTATGAAGAAAACACTTGTTTTCTACAGAGGAAGAGCTCCTAAAGGCCAGAAAACAA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G07 ATTGGGTGATGCATGAGTATAGGCTAGATGGAAAACTCTCTGCTCACAACTTGCCTAAAACCGCTAAGAATGAATGGGTGATCTGCAGGGTATTTCATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 ATTGGGTGATGCATGAGTATAGGCTAGATGGAAAACTCTCTGCTCACAACTTGCCTAAAACCGCTAAGAATGAATGGGTGATCTGCAGGGTATTTCATAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G07 AACTGCTGGAGGTAAGAAGATCCCGATTTCGACGTTAATCCGAATCGGTTCTTACGGAACCGGGTCTAGTTTACCACCTTTAACTGATTCTTCACCATAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AACTGCTGGAGGTAAGAAGATCCCGATTTCGACGTTAATCCGAATCGGTTCTTACGGAACCGGGTCTAGTTTACCACCTTTAACTGATTCTTCACCATAC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G07 AACGACAAAACCAAGACCGAACCAGTTTACGTGCCCTGCTTCTCCAACCAAGCTGAAACTAGAGGAACAATACTCAATTGCTTCAGCAACCCTTCCCTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AACGACAAAACCAAGACCGAACCAGTTTACGTGCCCTGCTTCTCCAACCAAGCTGAAACTAGAGGAACAATACTCAATTGCTTCAGCAACCCTTCCCTTA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G07 GCTCCATCCAACCAGATTTTCTCCAGATGATTCCACTCTACCAACCTCAATCTCTCAACATTTCCGAGAGTTCCAATCCGGTTCTTACGCAAGAACAATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 GCTCCATCCAACCAGATTTTCTCCAGATGATTCCACTCTACCAACCTCAATCTCTCAACATTTCCGAGAGTTCCAATCCGGTTCTTACGCAAGAACAATC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G07 AGTTTTACAAGCGATGATGGAAAACAACAGAAGGCAGAACTTCAAAACATTGAGCATCTCGCAAGAAACCGGGGTTTCGAACACCGATAACTCATCGGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 AGTTTTACAAGCGATGATGGAAAACAACAGAAGGCAGAACTTCAAAACATTGAGCATCTCGCAAGAAACCGGGGTTTCGAACACCGATAACTCATCGGTT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 AT5G07 TTTGAATTTGGGAGGAAGCGATTTGATCATCAAGAAGTTCCATCTCCCTCTTCCGGTCCGGTTGATCTTGAACCTTTCTGGAATTAC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 TTTGAATTTGGGAGGAAGCGATTTGATCATCAAGAAGTTCCATCTCCCTCTTCCGGTCCGGTTGATCTTGAACCTTTCTGGAATTAC 910 920 930 940 950 960 970 980 10 20 30 40 50 60 70 80 90 100 AT5G07 METFGVFHKEDDEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFFCVRDRKYPTGLRTNRATQAGYWKA ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: RE_064 METFGVFHKEDDEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLSKAEPWELPYKAKIGEKEWYFFCVRDRKYPTGLRTNRATQAGYWKA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G07 TGKDKEIFRGKSLVGMKKTLVFYRGRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGSSLPPLTDSSPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 TGKDKEIFRGKSLVGMKKTLVFYRGRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGSSLPPLTDSSPY 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G07 NDKTKTEPVYVPCFSNQAETRGTILNCFSNPSLSSIQPDFLQMIPLYQPQSLNISESSNPVLTQEQSVLQAMMENNRRQNFKTLSISQETGVSNTDNSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_064 NDKTKTEPVYVPCFSNQAETRGTILNCFSNPSLSSIQPDFLQMIPLYQPQSLNISESSNPVLTQEQSVLQAMMENNRRQNFKTLSISQETGVSNTDNSSV 210 220 230 240 250 260 270 280 290 300 310 320 AT5G07 FEFGRKRFDHQEVPSPSSGPVDLEPFWNY ::::::::::::::::::::::::::::: RE_064 FEFGRKRFDHQEVPSPSSGPVDLEPFWNY 310 320

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