◆◆◆RE_0651 detail◆◆◆

Code name	RE_0651
Locus	AT5G22290
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0651_1020bp ATGGACACGAAGGCGGTTGGAGTTTCTAAGGATACGGCGGCGTCGATGGAAGCGTCGACGGTGTTTCCTGGGTTTAAATTCTCGCCGACGGATGTGGAGT TGATTTCGTATTACCTGAAGCGGAAGATGGATGGCTTGGAGAGGTCCGTTGAGGTTATACCGGACCTTGAGATTTACAATTTCGAGCCTTGGGATTTACC CGATAAGTCGATTGTGAAATCTGATAGCGAGTGGTTCTTCTTCTGTGCGCGTGGGAAAAAGTATCCACATGGTTCACAGAACAGGAGAGCAACGAAGATG GGATACTGGAAAGCAACTGGGAAAGAGCGTGATGTGAAGTCTGGTTCTGAGGTCATTGGAACAAAGAGGACGCTTGTCTTCCATATTGGTCGTGCACCAA AAGGCGAAAGAACTGACTGGATTATGCACGAGTACTGCGTGAAAGGAGTATCTCTGGATGATGCTATGGTTGTTTGCCGGGTTAGGAGGAACAAAGAATA CAATAGTGGTACAAGTCAGAAGGCACCAAAGCCAAATTCATCAGCCGAGAAGCATGCGAAAGTCCAAAATGGCGCTACGAGTTCAGGGAGCCCGTCTGAT TGGGACAACTTGGTTGATTTTTACCTAGCAGGTGAATCAGGGGAGAAACTACTCGCTGAGATGGCAGAGTCATCAGAAAATCTACAGGTGGATAATGACG AGGATTTCTTTGCGGATATCCTAAGAGACGAAATCATCAATCTCGATGAAGCGGTGATGACAGGGAACGCACCAAACGAAGTGCCAACACTAGAATCAGC ATCAATGGAGATAAGGGTACTTCCTTTACCAAACATGATAGACAAACAAATGTCATCACTGTTAGAGGAAAGACCATCACAGAAGAAGAAAGGAAAAGAC GCCACGGAATCATTGTCGAGCTGCTTCGTGGGTTTATACTCGATCAAATCAGTGAACAAGGCACGATGGGATGTTATTATAGGTGTAGTGGCTCTGATAG CAATGTTGTTTTATCTAGAA >RE_0651_translated MDTKAVGVSKDTAASMEASTVFPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLPDKSIVKSDSEWFFFCARGKKYPHGSQNRRATKM GYWKATGKERDVKSGSEVIGTKRTLVFHIGRAPKGERTDWIMHEYCVKGVSLDDAMVVCRVRRNKEYNSGTSQKAPKPNSSAEKHAKVQNGATSSGSPSD WDNLVDFYLAGESGEKLLAEMAESSENLQVDNDEDFFADILRDEIINLDEAVMTGNAPNEVPTLESASMEIRVLPLPNMIDKQMSSLLEERPSQKKKGKD ATESLSSCFVGLYSIKSVNKARWDVIIGVVALIAMLFYLE
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1018/1020 (99.8%)（アミノ酸配列で339/340 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G22 ATGGACACGAAGGCGGTTGGAGTTTCTAAGGATACGGCGGCGTCGATGGAAGCGTCGACGGTGTTTCCTGGGTTTAAATTCTCGCCGACGGATGTGGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 ATGGACACGAAGGCGGTTGGAGTTTCTAAGGATACGGCGGCGTCGATGGAAGCGTCGACGGTGTTTCCTGGGTTTAAATTCTCGCCGACGGATGTGGAGT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G22 TGATTTCGTATTACCTGAAGCGGAAGATGGATGGCTTGGAGAGGTCCGTTGAGGTTATACCGGACCTTGAGATTTACAATTTCGAGCCTTGGGATTTACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 TGATTTCGTATTACCTGAAGCGGAAGATGGATGGCTTGGAGAGGTCCGTTGAGGTTATACCGGACCTTGAGATTTACAATTTCGAGCCTTGGGATTTACC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G22 CGATAAGTCGATTGTGAAATCTGATAGCGAGTGGTTCTTCTTCTGTGCGCGTGGGAAAAAGTATCCACATGGTTCACAGAACAGGAGAGCAACGAAGATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 CGATAAGTCGATTGTGAAATCTGATAGCGAGTGGTTCTTCTTCTGTGCGCGTGGGAAAAAGTATCCACATGGTTCACAGAACAGGAGAGCAACGAAGATG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G22 GGATACTGGAAAGCAACTGGGAAAGAGCGTGATGTGAAGTCTGGTTCTGAGGTCATTGGAACAAAGAGGACGCTTGTTTTCCATATTGGTCGTGCACCAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: RE_065 GGATACTGGAAAGCAACTGGGAAAGAGCGTGATGTGAAGTCTGGTTCTGAGGTCATTGGAACAAAGAGGACGCTTGTCTTCCATATTGGTCGTGCACCAA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G22 AAGGCGAAAGAACTGACTGGATTATGCACGAGTACTGCGTGAAAGGAGTATCTCTGGATGATGCTATGGTTGTTTGCCGGGTTAGGAGGAACAAAGAATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 AAGGCGAAAGAACTGACTGGATTATGCACGAGTACTGCGTGAAAGGAGTATCTCTGGATGATGCTATGGTTGTTTGCCGGGTTAGGAGGAACAAAGAATA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G22 CAATAGTGGTACAAGTCAGAAGGCACCAAAGCCAAATTCATCAGCCGAGAAGCATGCGAAAGTCCAAAATGGCGCTACGAGTTCAGGGAGCCCGTCTGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 CAATAGTGGTACAAGTCAGAAGGCACCAAAGCCAAATTCATCAGCCGAGAAGCATGCGAAAGTCCAAAATGGCGCTACGAGTTCAGGGAGCCCGTCTGAT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G22 TGGGACAACTTGGTTGATTTTTACCTAGCAGGTGAATCAGGGGAGAAACTACTCGCTGAGATGGCAGAGTCATCAGAAAATCTACAGGTGGATAATGACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 TGGGACAACTTGGTTGATTTTTACCTAGCAGGTGAATCAGGGGAGAAACTACTCGCTGAGATGGCAGAGTCATCAGAAAATCTACAGGTGGATAATGACG 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G22 AGGATTTCTTTGCGGATATCCTAAGAGACGAAATCATCAATCTCGATGAAGCGGTGATGACAGGGAACACACCAAACGAAGTGCCAACACTAGAATCAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: RE_065 AGGATTTCTTTGCGGATATCCTAAGAGACGAAATCATCAATCTCGATGAAGCGGTGATGACAGGGAACGCACCAAACGAAGTGCCAACACTAGAATCAGC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G22 ATCAATGGAGATAAGGGTACTTCCTTTACCAAACATGATAGACAAACAAATGTCATCACTGTTAGAGGAAAGACCATCACAGAAGAAGAAAGGAAAAGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 ATCAATGGAGATAAGGGTACTTCCTTTACCAAACATGATAGACAAACAAATGTCATCACTGTTAGAGGAAAGACCATCACAGAAGAAGAAAGGAAAAGAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G22 GCCACGGAATCATTGTCGAGCTGCTTCGTGGGTTTATACTCGATCAAATCAGTGAACAAGGCACGATGGGATGTTATTATAGGTGTAGTGGCTCTGATAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 GCCACGGAATCATTGTCGAGCTGCTTCGTGGGTTTATACTCGATCAAATCAGTGAACAAGGCACGATGGGATGTTATTATAGGTGTAGTGGCTCTGATAG 910 920 930 940 950 960 970 980 990 1000 1010 1020 AT5G22 CAATGTTGTTTTATCTAGAA :::::::::::::::::::: RE_065 CAATGTTGTTTTATCTAGAA 1010 1020 10 20 30 40 50 60 70 80 90 100 AT5G22 MDTKAVGVSKDTAASMEASTVFPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLPDKSIVKSDSEWFFFCARGKKYPHGSQNRRATKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 MDTKAVGVSKDTAASMEASTVFPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDLEIYNFEPWDLPDKSIVKSDSEWFFFCARGKKYPHGSQNRRATKM 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G22 GYWKATGKERDVKSGSEVIGTKRTLVFHIGRAPKGERTDWIMHEYCVKGVSLDDAMVVCRVRRNKEYNSGTSQKAPKPNSSAEKHAKVQNGATSSGSPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 GYWKATGKERDVKSGSEVIGTKRTLVFHIGRAPKGERTDWIMHEYCVKGVSLDDAMVVCRVRRNKEYNSGTSQKAPKPNSSAEKHAKVQNGATSSGSPSD 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G22 WDNLVDFYLAGESGEKLLAEMAESSENLQVDNDEDFFADILRDEIINLDEAVMTGNTPNEVPTLESASMEIRVLPLPNMIDKQMSSLLEERPSQKKKGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: RE_065 WDNLVDFYLAGESGEKLLAEMAESSENLQVDNDEDFFADILRDEIINLDEAVMTGNAPNEVPTLESASMEIRVLPLPNMIDKQMSSLLEERPSQKKKGKD 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT5G22 ATESLSSCFVGLYSIKSVNKARWDVIIGVVALIAMLFYLE :::::::::::::::::::::::::::::::::::::::: RE_065 ATESLSSCFVGLYSIKSVNKARWDVIIGVVALIAMLFYLE 310 320 330 340

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