◆◆◆RE_0657 detail◆◆◆

Code name	RE_0657
Locus	AT5G61430
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.70%一致
comment	0420_アミノ酸配列70%以上一致
sequence	>RE_0657_1008bp ATGGAGACTTTTTGTGGGTTTCAAAAGGAGGAAGAGCAGATGGATTTACCTCCTGGGTTCAGGTTTCATCCAACAGATGAAGAACTCATAACTCACTATC TCCATAAGAAGGTTCTTGACACCAGCTTCTCAGCTAAAGCTATCGGTGAAGTTGATTTAAACAAATCAGAGCCATGGGAGTTACCATGGATGGCAAAAAT GGGTGAGAAAGAATGGTATTTTTTCTGTGTGAGAGACAGAAAGTATCCCACCGGTTTAAGAACTAACCGAGCAACTGAAGCCGGTTATTGGAAGGCGACC GGGAAGGATAAAGAGATATACCGAGGCAAATCACTTGTTGGGATGAAGAAGACACTTGTTTTCTATAGAGGAAGAGCTCCTAAAGGTCAGAAAACCAACT GGGTGATGCATGAGTACAGGCTTGAAGGAAAATTCTCTGCCCATAACTTGCCGAAAACCGCAGAGAATGAATGGGTGATATGCAGGGTGTTCCAAAAGAG TGCTGGAGGGAAGAAGATCCCGATTTCGAGTCTAATCCGAATCGGTTCACTCGGAACCGACTTTAACCCTTCGCTTTTGCCCTCTTTAACCGATTCTTCG CCTTACAACGATAAAACCAAAACAGAACCGGTCTACGTGCCCTGCTTCTCCAACCAAACGGATCAAAACCAAGGAACCACACTCAATTGCTTCAGCAGCC CTGTTCTTAACTCGATCCAAGCCGACATTTTTCACAGGATTCCACTCTATCAAACTCAGTCCCTCCAGGTTTCTATGAATCTACAGAGCCCGGTTCTCAC GCAAGAACACTCAGTTCTACATGCTATGATCGAGAACAACAGAAGACAAAGTCTCAAAACGATGAGTGTCTCACAAGAAACCGGAGTTTCAACTGACATG AACACTGATATCTCATCGGATTTTGAATTTGGTAAGAGACGGTTTGATTCTCAAGAAGATCCGTCTTCCTCTACTGGACCGGTTGATCTTGAACCTTTCT GGAATTAC >RE_0657_translated METFCGFQKEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKAT GKDKEIYRGKSLVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAENEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSLLPSLTDSS PYNDKTKTEPVYVPCFSNQTDQNQGTTLNCFSSPVLNSIQADIFHRIPLYQTQSLQVSMNLQSPVLTQEHSVLHAMIENNRRQSLKTMSVSQETGVSTDM NTDISSDFEFGKRRFDSQEDPSSSTGPVDLEPFWNY
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1007/1008 (99.9%)（アミノ酸配列で335/336 (99.7%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G61 ATGGAGACTTTTTGTGGGTTTCAAAAGGAGGAAGAGCAGATGGATTTACCTCCTGGGTTCAGGTTTCATCCAACAGATGAAGAACTCATAACTCACTATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 ATGGAGACTTTTTGTGGGTTTCAAAAGGAGGAAGAGCAGATGGATTTACCTCCTGGGTTCAGGTTTCATCCAACAGATGAAGAACTCATAACTCACTATC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G61 TCCATAAGAAGGTTCTTGACACCAGCTTCTCAGCTAAAGCTATCGGTGAAGTTGATTTAAACAAATCAGAGCCATGGGAGTTACCATGGATGGCAAAAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 TCCATAAGAAGGTTCTTGACACCAGCTTCTCAGCTAAAGCTATCGGTGAAGTTGATTTAAACAAATCAGAGCCATGGGAGTTACCATGGATGGCAAAAAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G61 GGGTGAGAAAGAATGGTATTTTTTCTGTGTGAGAGACAGAAAGTATCCCACCGGTTTAAGAACTAACCGAGCAACTGAAGCCGGTTATTGGAAGGCGACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 GGGTGAGAAAGAATGGTATTTTTTCTGTGTGAGAGACAGAAAGTATCCCACCGGTTTAAGAACTAACCGAGCAACTGAAGCCGGTTATTGGAAGGCGACC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G61 GGGAAGGATAAAGAGATATACCGAGGCAAATCACTTGTTGGGATGAAGAAGACACTTGTTTTCTATAGAGGAAGAGCTCCTAAAGGTCAGAAAACCAACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 GGGAAGGATAAAGAGATATACCGAGGCAAATCACTTGTTGGGATGAAGAAGACACTTGTTTTCTATAGAGGAAGAGCTCCTAAAGGTCAGAAAACCAACT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G61 GGGTGATGCATGAGTACAGGCTTGAAGGAAAATTCTCTGCCCATAACTTGCCGAAAACCGCAAAGAATGAATGGGTGATATGCAGGGTGTTCCAAAAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: RE_065 GGGTGATGCATGAGTACAGGCTTGAAGGAAAATTCTCTGCCCATAACTTGCCGAAAACCGCAGAGAATGAATGGGTGATATGCAGGGTGTTCCAAAAGAG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G61 TGCTGGAGGGAAGAAGATCCCGATTTCGAGTCTAATCCGAATCGGTTCACTCGGAACCGACTTTAACCCTTCGCTTTTGCCCTCTTTAACCGATTCTTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 TGCTGGAGGGAAGAAGATCCCGATTTCGAGTCTAATCCGAATCGGTTCACTCGGAACCGACTTTAACCCTTCGCTTTTGCCCTCTTTAACCGATTCTTCG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G61 CCTTACAACGATAAAACCAAAACAGAACCGGTCTACGTGCCCTGCTTCTCCAACCAAACGGATCAAAACCAAGGAACCACACTCAATTGCTTCAGCAGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 CCTTACAACGATAAAACCAAAACAGAACCGGTCTACGTGCCCTGCTTCTCCAACCAAACGGATCAAAACCAAGGAACCACACTCAATTGCTTCAGCAGCC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G61 CTGTTCTTAACTCGATCCAAGCCGACATTTTTCACAGGATTCCACTCTATCAAACTCAGTCCCTCCAGGTTTCTATGAATCTACAGAGCCCGGTTCTCAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 CTGTTCTTAACTCGATCCAAGCCGACATTTTTCACAGGATTCCACTCTATCAAACTCAGTCCCTCCAGGTTTCTATGAATCTACAGAGCCCGGTTCTCAC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G61 GCAAGAACACTCAGTTCTACATGCTATGATCGAGAACAACAGAAGACAAAGTCTCAAAACGATGAGTGTCTCACAAGAAACCGGAGTTTCAACTGACATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 GCAAGAACACTCAGTTCTACATGCTATGATCGAGAACAACAGAAGACAAAGTCTCAAAACGATGAGTGTCTCACAAGAAACCGGAGTTTCAACTGACATG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G61 AACACTGATATCTCATCGGATTTTGAATTTGGTAAGAGACGGTTTGATTCTCAAGAAGATCCGTCTTCCTCTACTGGACCGGTTGATCTTGAACCTTTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 AACACTGATATCTCATCGGATTTTGAATTTGGTAAGAGACGGTTTGATTCTCAAGAAGATCCGTCTTCCTCTACTGGACCGGTTGATCTTGAACCTTTCT 910 920 930 940 950 960 970 980 990 1000 AT5G61 GGAATTAC :::::::: RE_065 GGAATTAC 10 20 30 40 50 60 70 80 90 100 AT5G61 METFCGFQKEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 METFCGFQKEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G61 GKDKEIYRGKSLVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSLLPSLTDSS ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: RE_065 GKDKEIYRGKSLVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKFSAHNLPKTAENEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSLLPSLTDSS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G61 PYNDKTKTEPVYVPCFSNQTDQNQGTTLNCFSSPVLNSIQADIFHRIPLYQTQSLQVSMNLQSPVLTQEHSVLHAMIENNRRQSLKTMSVSQETGVSTDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 PYNDKTKTEPVYVPCFSNQTDQNQGTTLNCFSSPVLNSIQADIFHRIPLYQTQSLQVSMNLQSPVLTQEHSVLHAMIENNRRQSLKTMSVSQETGVSTDM 210 220 230 240 250 260 270 280 290 300 310 320 330 AT5G61 NTDISSDFEFGKRRFDSQEDPSSSTGPVDLEPFWNY :::::::::::::::::::::::::::::::::::: RE_065 NTDISSDFEFGKRRFDSQEDPSSSTGPVDLEPFWNY 310 320 330

このページのTOPに戻る