◆◆◆RE_0658 detail◆◆◆

Code name	RE_0658
Locus	AT5G62380
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0520_20080115_0658_FRW1W2_5552
sequence	>RE_0658_1044bp ATGGAAAGTCTCGCACACATTCCTCCCGGTTATCGATTCCATCCGACCGATGAAGAACTCGTTGACTATTATCTCAAGAACAAAGTTGCATTCCCGGGAA TGCAAGTTGATGTTATCAAAGATGTTGATCTCTACAAAATCGAGCCATGGGACATCCAAGAGTTATGTGGAAGAGGGACAGGAGAAGAGAGGGAATGGTA CTTCTTTAGCCACAAGGACAAGAAATATCCAACTGGGACACGAACCAATAGAGCAACGGGCTCCGGATTTTGGAAAGCAACGGGTCGAGACAAGGCCATT TACTCAAAGCAAGAGCTTGTTGGGATGAGGAAGACTCTTGTCTTTTACAAAGGTAGGGCCCCAAATGGTCAGAAATCTGATTGGATAATGCACGAATACC GTCTTGAGACCGATGAAAATGGACCGCCTCATGAGGAAGGATGGGTGGTTTGTCGCGCTTTCAAGAAGAAGCTAACTACGATGAACTACAACAATCCAAG AACAATGATGGGATCATCATCAGGCCAAGAATCTAACTGGTTCACGCAGCAAATGGATGTGGGGAATGGTAATTACTATCATCTTCCTGACCTAGAGAGT CCGAGAATGTTTCAAGGCTCATCATCATCATCACTATCATCATTACATCAGAATGATCAAGACCCTTATGGTGTCGTACTCAGCACTATTAACGCAACCC CAACTACAATAATGCAACGAGATGATGGTCATGTGATTACCAATGATGATGATCATATGATCATGATGAACACAAGTACTGGTGATCATCATCAATCAGG ATTACTAGTCAATGATGATCATAATGATCAAGTAATGGATTGGCAAACGCTTGACAAGTTTGTTGCTTCTCAGCTAATCATGAGCCAAGAAGAGGAAGAA GTTAACAAAGATCCATCAGATAATTCTTCGAATGAAACATTTCATCATCTCTCTGAAGAGCAAGCTGCAACAATGGTTTCGATGAATGCTTCTTCCTCTT CTTCTCCATGTTCCTTCTACTCTTGGGCTCAAAATACACACACG >RE_0658_translated MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGTGEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAI YSKQELVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNWFTQQMDVGNGNYYHLPDLES PRMFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTTIMQRDDGHVITNDDDHMIMMNTSTGDHHQSGLLVNDDHNDQVMDWQTLDKFVASQLIMSQEEEE VNKDPSDNSSNETFHHLSEEQAATMVSMNASSSSSPCSFYSWAQNTHT
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1041/1044 (99.7%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G62 ATGGAAAGTCTCGCACACATTCCTCCCGGTTATCGATTCCATCCGACCGATGAAGAACTCGTTGACTATTATCTCAAGAACAAAGTTGCATTCCCGGGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 ATGGAAAGTCTCGCACACATTCCTCCCGGTTATCGATTCCATCCGACCGATGAAGAACTCGTTGACTATTATCTCAAGAACAAAGTTGCATTCCCGGGAA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G62 TGCAAGTTGATGTTATCAAAGATGTTGATCTCTACAAAATCGAGCCATGGGACATCCAAGAGTTATGTGGAAGAGGGACAGGAGAAGAGAGGGAATGGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 TGCAAGTTGATGTTATCAAAGATGTTGATCTCTACAAAATCGAGCCATGGGACATCCAAGAGTTATGTGGAAGAGGGACAGGAGAAGAGAGGGAATGGTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G62 TTTCTTTAGCCACAAGGACAAGAAATATCCAACTGGGACACGAACCAATAGAGCAACGGGCTCCGGATTTTGGAAAGCAACGGGTCGAGACAAGGCCATT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 CTTCTTTAGCCACAAGGACAAGAAATATCCAACTGGGACACGAACCAATAGAGCAACGGGCTCCGGATTTTGGAAAGCAACGGGTCGAGACAAGGCCATT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G62 TACTCAAAGCAAGAGCTTGTTGGGATGAGGAAGACTCTTGTCTTTTACAAAGGTAGGGCCCCAAATGGTCAGAAATCTGATTGGATAATGCACGAATACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 TACTCAAAGCAAGAGCTTGTTGGGATGAGGAAGACTCTTGTCTTTTACAAAGGTAGGGCCCCAAATGGTCAGAAATCTGATTGGATAATGCACGAATACC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G62 GTCTTGAGACCGATGAAAATGGACCGCCTCATGAGGAAGGATGGGTGGTTTGTCGCGCTTTCAAGAAGAAGCTAACCACGATGAACTACAACAATCCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: RE_065 GTCTTGAGACCGATGAAAATGGACCGCCTCATGAGGAAGGATGGGTGGTTTGTCGCGCTTTCAAGAAGAAGCTAACTACGATGAACTACAACAATCCAAG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G62 AACAATGATGGGATCATCATCAGGCCAAGAATCTAACTGGTTCACGCAGCAAATGGATGTGGGGAATGGTAATTACTATCATCTTCCTGATCTAGAGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: RE_065 AACAATGATGGGATCATCATCAGGCCAAGAATCTAACTGGTTCACGCAGCAAATGGATGTGGGGAATGGTAATTACTATCATCTTCCTGACCTAGAGAGT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G62 CCGAGAATGTTTCAAGGCTCATCATCATCATCACTATCATCATTACATCAGAATGATCAAGACCCTTATGGTGTCGTACTCAGCACTATTAACGCAACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 CCGAGAATGTTTCAAGGCTCATCATCATCATCACTATCATCATTACATCAGAATGATCAAGACCCTTATGGTGTCGTACTCAGCACTATTAACGCAACCC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G62 CAACTACAATAATGCAACGAGATGATGGTCATGTGATTACCAATGATGATGATCATATGATCATGATGAACACAAGTACTGGTGATCATCATCAATCAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 CAACTACAATAATGCAACGAGATGATGGTCATGTGATTACCAATGATGATGATCATATGATCATGATGAACACAAGTACTGGTGATCATCATCAATCAGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G62 ATTACTAGTCAATGATGATCATAATGATCAAGTAATGGATTGGCAAACGCTTGACAAGTTTGTTGCTTCTCAGCTAATCATGAGCCAAGAAGAGGAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 ATTACTAGTCAATGATGATCATAATGATCAAGTAATGGATTGGCAAACGCTTGACAAGTTTGTTGCTTCTCAGCTAATCATGAGCCAAGAAGAGGAAGAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G62 GTTAACAAAGATCCATCAGATAATTCTTCGAATGAAACATTTCATCATCTCTCTGAAGAGCAAGCTGCAACAATGGTTTCGATGAATGCTTCTTCCTCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 GTTAACAAAGATCCATCAGATAATTCTTCGAATGAAACATTTCATCATCTCTCTGAAGAGCAAGCTGCAACAATGGTTTCGATGAATGCTTCTTCCTCTT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 AT5G62 CTTCTCCATGTTCCTTCTACTCTTGGGCTCAAAATACACACACG :::::::::::::::::::::::::::::::::::::::::::: RE_065 CTTCTCCATGTTCCTTCTACTCTTGGGCTCAAAATACACACACG 1010 1020 1030 1040 10 20 30 40 50 60 70 80 90 100 AT5G62 MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGTGEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 MESLAHIPPGYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLYKIEPWDIQELCGRGTGEEREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAI 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G62 YSKQELVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNWFTQQMDVGNGNYYHLPDLES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 YSKQELVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGPPHEEGWVVCRAFKKKLTTMNYNNPRTMMGSSSGQESNWFTQQMDVGNGNYYHLPDLES 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G62 PRMFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTTIMQRDDGHVITNDDDHMIMMNTSTGDHHQSGLLVNDDHNDQVMDWQTLDKFVASQLIMSQEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_065 PRMFQGSSSSSLSSLHQNDQDPYGVVLSTINATPTTIMQRDDGHVITNDDDHMIMMNTSTGDHHQSGLLVNDDHNDQVMDWQTLDKFVASQLIMSQEEEE 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT5G62 VNKDPSDNSSNETFHHLSEEQAATMVSMNASSSSSPCSFYSWAQNTHT :::::::::::::::::::::::::::::::::::::::::::::::: RE_065 VNKDPSDNSSNETFHHLSEEQAATMVSMNASSSSSPCSFYSWAQNTHT 310 320 330 340

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