◆◆◆RE_0670 detail◆◆◆

Code name	RE_0670
Locus	AT3G12680
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0422_アミノ酸配列70%以上一致
sequence	>RE_0670_1572bp ATGGCACATCGTCAATTGTATAGCTACGCCCTTCAACCTTCTTATGCTGCTGCTGCCTCCACCGTATCTCCAGCTCCTCCTCCGCCGCAACAACCACTGC CGCCAAAAACCGGTCTTTCTTCTCTCTACGGTTCTTCTGCTGACCATTACTTTCCGGATACCACGTATCGTTTCTTAGCTCGTGATGGATCCGAAGCTTT GAGCAACTATTCAGGGACTCTTGCATCGTCTTCCTCTATGTACCATCATTTGCCTAACACGACGGCATCGCATTTGGCGTATCCTCAGCTGCTTCAGCAT CAGGAAGTTGCTTGGCCACCTGGTGTGGAGGTTCCCGGTGCTGCTTCCGCCGTCGAGCCACTTCCTCCTGGTGTCAAACGCACCTCTGAAGCGCTCTACT ATCCGACTCTGTTGGGTGCCCATAATACAATTGGTCAAACCGAAGCTTGGTATACTACAGACTATTTTACCAAGCGCCCTAAGTTGGAGAGTACAAGCCA TTTGCCTATATATCCACAGAGGGCAGGAGAGAAAGATTGTACCCACTATATGCAAACAAGAACATGTAAATTTGGAGAAAGCTGCAGGTTTGATCATCCT ATTTGGGTTCCTGAGGGCGGAATCCCAGATTGGAAAGAGGCACCAGTTGTTCCAAATGAAGAGTATCCTGAGAGACCAGGAGAACCAGATTGTCCTTACT ATATAAAAACACAACGCTGCAAATATGGTTCAAAGTGCAAATTTAATCATCCAAGAGAAGAGGCTGCAGTTAGTGTTGAAACTCAAGATTCATTGCCTGA GAGGCCTTCTGAACCTATGTGCACATTCTACATGAAGACTGGAAAATGTAAATTTGGTTTGTCATGCAAATTCCACCATCCAAAGGATATCCAGCTACCA TCATCGAGTCAAGATATTGGTAGCAGTGTGGGGTTAACCAGTGAGCCTGATGCCACAAACAATCCGCATGTCACATTTACCCCAGCATTGTATCACAACT CAAAAGGACTACCTGTTAGATCGGGTGAAGTGGACTGCCCATTCTATCTCAAAACGGGAAGCTGCAAGTATGGAGCCACTTGTCGCTACAATCATCCTGA GAGGACTGCATTCATTCTCCAAGCTGCTGGGGTAAACTATTCTCTAGTTTCATCGAACACTGCGAATTTGAACCTTGGGCTGGTTACACCAGCTACCTCT TTCTATCAGACTCTTACTCAACCCACGCTTGGAGTGATTTCAGCAACTTATCCCCAAAGACCTGGACAATCAGAATGTGACTACTACATGAAGACAGGGG AGTGCAAGTTTGGAGAGAGATGCAAATTCCATCACCCAGCAGATAGGTTAAGTGCAATGACCAAACAAGCTCCTCAACAACCAAATGTAAAGCTGAGTCT TGCAGGGTATCCCAGAAGAGAGGGTGCGCTTAATTGCCCTTATTACATGAAGACAGGAACTTGCAAATACGGGGCAACATGCAAGTTTGACCATCCTCCT CCAGGTGAGGTGATGGCTAAGACCACTTCAGAAGCCGATGCTGCTGGAGCAACCAACACCGACACTACTCAA >RE_0670_translated MAHRQLYSYALQPSYAAAASTVSPAPPPPQQPLPPKTGLSSLYGSSADHYFPDTTYRFLARDGSEALSNYSGTLASSSSMYHHLPNTTASHLAYPQLLQH QEVAWPPGVEVPGAASAVEPLPPGVKRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRPKLESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHP IWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLP SSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFILQAAGVNYSLVSSNTANLNLGLVTPATS FYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPP PGEVMAKTTSEADAAGATNTDTTQ
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1571/1572 (99.9%)（アミノ酸配列で523/524 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G12 ATGGCACATCGTCAATTGTATAGCTACGCCCTTCAACCTTCTTATGCTGCTGCTGCCTCCACCGTATCTCCAGCTCCTCCTCCGCCGCAACAACCACTGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 ATGGCACATCGTCAATTGTATAGCTACGCCCTTCAACCTTCTTATGCTGCTGCTGCCTCCACCGTATCTCCAGCTCCTCCTCCGCCGCAACAACCACTGC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G12 CGCCAAAAACCGGTCTTTCTTCTCTCTACGGTTCTTCTGCTGACCATTACTTTCCGGATACCACGTATCGTTTCTTAGCTCGTGATGGATCCGAAGCTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 CGCCAAAAACCGGTCTTTCTTCTCTCTACGGTTCTTCTGCTGACCATTACTTTCCGGATACCACGTATCGTTTCTTAGCTCGTGATGGATCCGAAGCTTT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G12 GAGCAACTATTCAGGGACTCTTGCATCGTCTTCCTCTATGTACCATCATTTGCCTAACACGACGGCATCGCATTTGGCGTATCCTCAGCTGCTTCAGCAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 GAGCAACTATTCAGGGACTCTTGCATCGTCTTCCTCTATGTACCATCATTTGCCTAACACGACGGCATCGCATTTGGCGTATCCTCAGCTGCTTCAGCAT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G12 CAGGAAGTTGCTTGGCCACCTGGTGTGGAGGTTCCCGGTGCTGCTTCCGCCGTCGAGCCACTTCCTCCTGGTGTCAAACGCACCTCTGAAGCGCTCTACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 CAGGAAGTTGCTTGGCCACCTGGTGTGGAGGTTCCCGGTGCTGCTTCCGCCGTCGAGCCACTTCCTCCTGGTGTCAAACGCACCTCTGAAGCGCTCTACT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G12 ATCCGACTCTGTTGGGTGCCCATAATACAATTGGTCAAACCGAAGCTTGGTATACTACAGACTATTTTACCAAGCGCCCTAAGTTGGAGAGTACAAGCCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 ATCCGACTCTGTTGGGTGCCCATAATACAATTGGTCAAACCGAAGCTTGGTATACTACAGACTATTTTACCAAGCGCCCTAAGTTGGAGAGTACAAGCCA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT3G12 TTTGCCTATATATCCACAGAGGGCAGGAGAGAAAGATTGTACCCACTATATGCAAACAAGAACATGTAAATTTGGAGAAAGCTGCAGGTTTGATCATCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 TTTGCCTATATATCCACAGAGGGCAGGAGAGAAAGATTGTACCCACTATATGCAAACAAGAACATGTAAATTTGGAGAAAGCTGCAGGTTTGATCATCCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT3G12 ATTTGGGTTCCTGAGGGCGGAATCCCAGATTGGAAAGAGGCACCAGTTGTTCCAAATGAAGAGTATCCTGAGAGACCAGGAGAACCAGATTGTCCTTACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 ATTTGGGTTCCTGAGGGCGGAATCCCAGATTGGAAAGAGGCACCAGTTGTTCCAAATGAAGAGTATCCTGAGAGACCAGGAGAACCAGATTGTCCTTACT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT3G12 ATATAAAAACACAACGCTGCAAATATGGTTCAAAGTGCAAATTTAATCATCCAAGAGAAGAGGCTGCAGTTAGTGTTGAAACTCAAGATTCATTGCCTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 ATATAAAAACACAACGCTGCAAATATGGTTCAAAGTGCAAATTTAATCATCCAAGAGAAGAGGCTGCAGTTAGTGTTGAAACTCAAGATTCATTGCCTGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT3G12 GAGGCCTTCTGAACCTATGTGCACATTCTACATGAAGACTGGAAAATGTAAATTTGGTTTGTCATGCAAATTCCACCATCCAAAGGATATCCAGCTACCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 GAGGCCTTCTGAACCTATGTGCACATTCTACATGAAGACTGGAAAATGTAAATTTGGTTTGTCATGCAAATTCCACCATCCAAAGGATATCCAGCTACCA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT3G12 TCATCGAGTCAAGATATTGGTAGCAGTGTGGGGTTAACCAGTGAGCCTGATGCCACAAACAATCCGCATGTCACATTTACCCCAGCATTGTATCACAACT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 TCATCGAGTCAAGATATTGGTAGCAGTGTGGGGTTAACCAGTGAGCCTGATGCCACAAACAATCCGCATGTCACATTTACCCCAGCATTGTATCACAACT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT3G12 CAAAAGGACTACCTGTTAGATCGGGTGAAGTGGACTGCCCATTCTATCTCAAAACGGGAAGCTGCAAGTATGGAGCCACTTGTCGCTACAATCATCCTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 CAAAAGGACTACCTGTTAGATCGGGTGAAGTGGACTGCCCATTCTATCTCAAAACGGGAAGCTGCAAGTATGGAGCCACTTGTCGCTACAATCATCCTGA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT3G12 GAGGACTGCATTCATTCCCCAAGCTGCTGGGGTAAACTATTCTCTAGTTTCATCGAACACTGCGAATTTGAACCTTGGGCTGGTTACACCAGCTACCTCT ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 GAGGACTGCATTCATTCTCCAAGCTGCTGGGGTAAACTATTCTCTAGTTTCATCGAACACTGCGAATTTGAACCTTGGGCTGGTTACACCAGCTACCTCT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT3G12 TTCTATCAGACTCTTACTCAACCCACGCTTGGAGTGATTTCAGCAACTTATCCCCAAAGACCTGGACAATCAGAATGTGACTACTACATGAAGACAGGGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 TTCTATCAGACTCTTACTCAACCCACGCTTGGAGTGATTTCAGCAACTTATCCCCAAAGACCTGGACAATCAGAATGTGACTACTACATGAAGACAGGGG 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 AT3G12 AGTGCAAGTTTGGAGAGAGATGCAAATTCCATCACCCAGCAGATAGGTTAAGTGCAATGACCAAACAAGCTCCTCAACAACCAAATGTAAAGCTGAGTCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 AGTGCAAGTTTGGAGAGAGATGCAAATTCCATCACCCAGCAGATAGGTTAAGTGCAATGACCAAACAAGCTCCTCAACAACCAAATGTAAAGCTGAGTCT 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 AT3G12 TGCAGGGTATCCCAGAAGAGAGGGTGCGCTTAATTGCCCTTATTACATGAAGACAGGAACTTGCAAATACGGGGCAACATGCAAGTTTGACCATCCTCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 TGCAGGGTATCCCAGAAGAGAGGGTGCGCTTAATTGCCCTTATTACATGAAGACAGGAACTTGCAAATACGGGGCAACATGCAAGTTTGACCATCCTCCT 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 1570 AT3G12 CCAGGTGAGGTGATGGCTAAGACCACTTCAGAAGCCGATGCTGCTGGAGCAACCAACACCGACACTACTCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 CCAGGTGAGGTGATGGCTAAGACCACTTCAGAAGCCGATGCTGCTGGAGCAACCAACACCGACACTACTCAA 1510 1520 1530 1540 1550 1560 1570 10 20 30 40 50 60 70 80 90 100 AT3G12 MAHRQLYSYALQPSYAAAASTVSPAPPPPQQPLPPKTGLSSLYGSSADHYFPDTTYRFLARDGSEALSNYSGTLASSSSMYHHLPNTTASHLAYPQLLQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 MAHRQLYSYALQPSYAAAASTVSPAPPPPQQPLPPKTGLSSLYGSSADHYFPDTTYRFLARDGSEALSNYSGTLASSSSMYHHLPNTTASHLAYPQLLQH 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G12 QEVAWPPGVEVPGAASAVEPLPPGVKRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRPKLESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 QEVAWPPGVEVPGAASAVEPLPPGVKRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRPKLESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHP 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G12 IWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 IWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLP 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G12 SSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: RE_067 SSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFILQAAGVNYSLVSSNTANLNLGLVTPATS 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G12 FYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_067 FYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPP 410 420 430 440 450 460 470 480 490 500 510 520 AT3G12 PGEVMAKTTSEADAAGATNTDTTQ :::::::::::::::::::::::: RE_067 PGEVMAKTTSEADAAGATNTDTTQ 510 520

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