◆◆◆RE_0681 detail◆◆◆

Code name	RE_0681
Locus	AT5G63260
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0318_アミノ酸配列70%以上一致
sequence	>RE_0681_1305bp ATGAGCAAGCCCGAAGAAACTTCCGACCCGAACCCAACCGGACCCGATCCGTCTCGATCTTCCTCCGATGAGGTCACCGTCACCGTCGCCGATCGGGCTC CGTCTGATCTCAATCACGTTTCTGAGGAGCTAAGTGATCAATTGAGGAATGTGGGTTTGGATGATTCTGCGAAAGAGCTGAGTGTTCCGATTAGTGTCCC TCAAGGTAATGTAGAAACGGATTCGAGGGCATTATTCGGCAGCGATCAAAAGGAGGAAGAAGAAGGGAGCGAGAAGAGAATGATGATGGTGTATCCAGTG AGACCTGACTCAGAGGATTGTTCGTTTTATATGAGAACTGGAAGCTGCAAATACGGATCAAGTTGCAAGTTCAATCACCCTGTTCGCAGGAAACTTCAAA TTGGTAGGGAGAGAGTAAGGGAAAGAGACGAGGATGTGGAGAACCCAAAGCTGATGGAGTGTAAGTACTACTTTAGGACTGGAGGGTGCAAATATGGAGA GTCTTGTAGATTCAGCCACATGAAAGAACATAATTCTCCGGCCTCAGTACCAGAGCTTAACTTCCTTGGCCTTCCTATCAGACCGGGAGAGAAAGAATGC CCGTTCTACATGCGCAATGGCTCCTGCAAGTTTGGATCAGACTGCAAATTTAATCATCCTGATCCTACAGCTATCGGAGGAGTTGATTCTCCCTTGTACC GTGGTAATAACGGTGGATCCCTTTCCCCAAAGGCCCCATCCCAAGCAAGTTCAACTTCTTGGTCTTCAACGAGACATATGAATGGTACTGGTACTGCTCC TTTTATTCCATCCATGTTCCCCCATAGTCGTGGAGTTACACCTCAAGCTTCAGACTGGAATGGGTATCAGGCGTCTTCTGCCTATCCACCAGAAAGGAGT CCACTTGCTCCTTCCTCATACCAGGTGAACAATTCATTGGCTGAAACTAGTTCATTCTCACAATACCAACACCAGATGTCTGTTGAGGAATTCCCAGAAC GCCCGGATCAACCAGAGTGCACTTATTATCTTAAAACTGGGGACTGTAAGTTCAAATATAAATGCAAATACCATCATCCGAAAAATAGATTGCCGAAGCA AGCTGCATTCTCTTTCAATGACAAGGGCTTGCCCCTAAGACCTGATCAGAGCATGTGCACACACTACAGCCGATATGGCATCTGCAAATTTGGTCCAGCT TGTAGATTTGATCATTCCATACCGCCCACATTCTCGCCCAGCAGCTCCCAAACCGTAGAAGCTCGTCAAGTTGGCGCTAACGGAAATGAAGATGACAGCT GGCAT >RE_0681_translated MSKPEETSDPNPTGPDPSRSSSDEVTVTVADRAPSDLNHVSEELSDQLRNVGLDDSAKELSVPISVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPV RPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKEC PFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSLSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERS PLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPA CRFDHSIPPTFSPSSSQTVEARQVGANGNEDDSWH
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1303/1305 (99.8%)（アミノ酸配列で434/435 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT5G63 ATGAGCAAGCCCGAAGAAACTTCCGACCCGAACCCAACCGGACCCGATCCGTCTCGATCTTCCTCCGATGAGGTCACCGTCACCGTCGCCGATCGGGCTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 ATGAGCAAGCCCGAAGAAACTTCCGACCCGAACCCAACCGGACCCGATCCGTCTCGATCTTCCTCCGATGAGGTCACCGTCACCGTCGCCGATCGGGCTC 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G63 CGTCTGATCTCAATCACGTTTCTGAGGAGCTAAGTGATCAATTGAGGAATGTGGGTTTGGATGATTCTGCGAAAGAGCTGAGTGTTCCGATTAGTGTCCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 CGTCTGATCTCAATCACGTTTCTGAGGAGCTAAGTGATCAATTGAGGAATGTGGGTTTGGATGATTCTGCGAAAGAGCTGAGTGTTCCGATTAGTGTCCC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G63 TCAAGGTAATGTAGAAACGGATTCGAGGGCATTATTCGGCAGCGATCAAAAGGAGGAAGAAGAAGGGAGCGAGAAGAGAATGATGATGGTGTATCCAGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 TCAAGGTAATGTAGAAACGGATTCGAGGGCATTATTCGGCAGCGATCAAAAGGAGGAAGAAGAAGGGAGCGAGAAGAGAATGATGATGGTGTATCCAGTG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G63 AGACCTGATTCAGAGGATTGTTCGTTTTATATGAGAACTGGAAGCTGCAAATACGGATCAAGTTGCAAGTTCAATCACCCTGTTCGCAGGAAACTTCAAA :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 AGACCTGACTCAGAGGATTGTTCGTTTTATATGAGAACTGGAAGCTGCAAATACGGATCAAGTTGCAAGTTCAATCACCCTGTTCGCAGGAAACTTCAAA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT5G63 TTGGTAGGGAGAGAGTAAGGGAAAGAGACGAGGATGTGGAGAACCCAAAGCTGATGGAGTGTAAGTACTACTTTAGGACTGGAGGGTGCAAATATGGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 TTGGTAGGGAGAGAGTAAGGGAAAGAGACGAGGATGTGGAGAACCCAAAGCTGATGGAGTGTAAGTACTACTTTAGGACTGGAGGGTGCAAATATGGAGA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT5G63 GTCTTGTAGATTCAGCCACATGAAAGAACATAATTCTCCGGCCTCAGTACCAGAGCTTAACTTCCTTGGCCTTCCTATCAGACCGGGAGAGAAAGAATGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 GTCTTGTAGATTCAGCCACATGAAAGAACATAATTCTCCGGCCTCAGTACCAGAGCTTAACTTCCTTGGCCTTCCTATCAGACCGGGAGAGAAAGAATGC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT5G63 CCGTTCTACATGCGCAATGGCTCCTGCAAGTTTGGATCAGACTGCAAATTTAATCATCCTGATCCTACAGCTATCGGAGGAGTTGATTCTCCCTTGTACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 CCGTTCTACATGCGCAATGGCTCCTGCAAGTTTGGATCAGACTGCAAATTTAATCATCCTGATCCTACAGCTATCGGAGGAGTTGATTCTCCCTTGTACC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT5G63 GTGGTAATAACGGTGGATCCTTTTCCCCAAAGGCCCCATCCCAAGCAAGTTCAACTTCTTGGTCTTCAACGAGACATATGAATGGTACTGGTACTGCTCC :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 GTGGTAATAACGGTGGATCCCTTTCCCCAAAGGCCCCATCCCAAGCAAGTTCAACTTCTTGGTCTTCAACGAGACATATGAATGGTACTGGTACTGCTCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT5G63 TTTTATTCCATCCATGTTCCCCCATAGTCGTGGAGTTACACCTCAAGCTTCAGACTGGAATGGGTATCAGGCGTCTTCTGCCTATCCACCAGAAAGGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 TTTTATTCCATCCATGTTCCCCCATAGTCGTGGAGTTACACCTCAAGCTTCAGACTGGAATGGGTATCAGGCGTCTTCTGCCTATCCACCAGAAAGGAGT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT5G63 CCACTTGCTCCTTCCTCATACCAGGTGAACAATTCATTGGCTGAAACTAGTTCATTCTCACAATACCAACACCAGATGTCTGTTGAGGAATTCCCAGAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 CCACTTGCTCCTTCCTCATACCAGGTGAACAATTCATTGGCTGAAACTAGTTCATTCTCACAATACCAACACCAGATGTCTGTTGAGGAATTCCCAGAAC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT5G63 GCCCGGATCAACCAGAGTGCACTTATTATCTTAAAACTGGGGACTGTAAGTTCAAATATAAATGCAAATACCATCATCCGAAAAATAGATTGCCGAAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 GCCCGGATCAACCAGAGTGCACTTATTATCTTAAAACTGGGGACTGTAAGTTCAAATATAAATGCAAATACCATCATCCGAAAAATAGATTGCCGAAGCA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT5G63 AGCTGCATTCTCTTTCAATGACAAGGGCTTGCCCCTAAGACCTGATCAGAGCATGTGCACACACTACAGCCGATATGGCATCTGCAAATTTGGTCCAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 AGCTGCATTCTCTTTCAATGACAAGGGCTTGCCCCTAAGACCTGATCAGAGCATGTGCACACACTACAGCCGATATGGCATCTGCAAATTTGGTCCAGCT 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT5G63 TGTAGATTTGATCATTCCATACCGCCCACATTCTCGCCCAGCAGCTCCCAAACCGTAGAAGCTCGTCAAGTTGGCGCTAACGGAAATGAAGATGACAGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 TGTAGATTTGATCATTCCATACCGCCCACATTCTCGCCCAGCAGCTCCCAAACCGTAGAAGCTCGTCAAGTTGGCGCTAACGGAAATGAAGATGACAGCT 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT5G63 GGCAT ::::: RE_068 GGCAT 10 20 30 40 50 60 70 80 90 100 AT5G63 MSKPEETSDPNPTGPDPSRSSSDEVTVTVADRAPSDLNHVSEELSDQLRNVGLDDSAKELSVPISVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 MSKPEETSDPNPTGPDPSRSSSDEVTVTVADRAPSDLNHVSEELSDQLRNVGLDDSAKELSVPISVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPV 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT5G63 RPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 RPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKEC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT5G63 PFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERS :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 PFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSLSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERS 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT5G63 PLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_068 PLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPA 310 320 330 340 350 360 370 380 390 400 410 420 430 AT5G63 CRFDHSIPPTFSPSSSQTVEARQVGANGNEDDSWH ::::::::::::::::::::::::::::::::::: RE_068 CRFDHSIPPTFSPSSSQTVEARQVGANGNEDDSWH 410 420 430

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