◆◆◆RE_0776 detail◆◆◆

Code name	RE_0776
Locus	AT4G23810
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0776_972bp ATGGAAGGAAGAGATATGTTAAGTTGGGAGCAAAAGACATTGCTAAGCGAGCTTATCAATGGATTTGATGCGGCCAAAAAGCTTCAGGCACGACTTAGAG AAGCTCCGTCGCCGTCGTCATCATTTTCATCACCGGCGACGGCTGTTGCTGAGACTAACGAGATTCTGGTGAAGCAGATAGTTTCTTCCTACGAGAGATC TCTTCTTCTGCTAAACTGGTCATCCTCACCGAGCGTACAACTTATTCCGACGCCGGTTACTGTAGTCCCGGTGGCAAATCCCGGCAGTGTTCCAGAATCT CCGGCATCGATAAACGGAAGTCCGAGAAGTGAAGAGTTTGCCGATGGAGGAGGTTCTAGCGAGAGTCGTCATCGCCAAGATTACATTTTCAATTCAAAGA AAAGAAAGATGTTACCAAAGTGGTCAGAAAAAGTGAGAATAAGCCCAGAGAGAGGCTTAGAAGGACCTCAAGATGATGTCTTTAGCTGGAGAAAATATGG TCAAAAAGACATTTTAGGCGCCAAATTCCCAAGGAGTTATTACAGATGCACACATCGTAGCACACAAAACTGTTGGGCAACGAAACAGGTCCAGAGATCA GACGGGGATGCTACGGTTTTCGAAGTGACGTACAGAGGAACACACACTTGTTCGCAGGCGATCACAAGAACACCACCATTAGCCTCGCCGGAGAAGCGAC AAGACACCAGAGTCAAACCAGCCATTACCCAAAAGCCAAAGGATATTCTCGAGAGTCTTAAATCCAACTTAACCGTTCGAACCGATGGGCTTGATGATGG TAAAGACGTTTTCTCGTTCCCTGATACGCCGCCGTTTTACAATTACGGAACTATCAACGGCGAGTTCGGCCACGTGGAGAGTTCTCCGATCTTCGACGTT GTTGACTGGTTCAATCCAACGGTCGAGATTGACACAACTTTCCCCGCGTTTTTACACGAGTCGATTTATTTT >RE_0776_translated MEGRDMLSWEQKTLLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILVKQIVSSYERSLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPES PASINGSPRSEEFADGGGSSESRHRQDYIFNSKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRS DGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAITQKPKDILESLKSNLTVRTDGLDDGKDVFSFPDTPPFYNYGTINGEFGHVESSPIFDV VDWFNPTVEIDTTFPAFLHESIYF
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 969/972 (99.7%)（アミノ酸配列で322/324 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT4G23 ATGGAAGGAAGAGATATGTTAAGTTGGGAGCAAAAGACATTGCTAAGCGAGCTTATCAATGGATTTGATGCGGCCAAAAAGCTTCAGGCACGACTTAGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 ATGGAAGGAAGAGATATGTTAAGTTGGGAGCAAAAGACATTGCTAAGCGAGCTTATCAATGGATTTGATGCGGCCAAAAAGCTTCAGGCACGACTTAGAG 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G23 AAGCTCCGTCGCCGTCGTCATCATTTTCATCACCGGCGACGGCTGTTGCTGAGACTAACGAGATTCTGGTGAAGCAGATAGTTTCTTCCTACGAGAGATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 AAGCTCCGTCGCCGTCGTCATCATTTTCATCACCGGCGACGGCTGTTGCTGAGACTAACGAGATTCTGGTGAAGCAGATAGTTTCTTCCTACGAGAGATC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G23 TCTTCTTCTGCTAAACTGGTCATCCTCACCGAGCGTACAACTTATTCCGACGCCGGTTACTGTAGTCCCGGTGGCAAATCCCGGCAGTGTTCCAGAATCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 TCTTCTTCTGCTAAACTGGTCATCCTCACCGAGCGTACAACTTATTCCGACGCCGGTTACTGTAGTCCCGGTGGCAAATCCCGGCAGTGTTCCAGAATCT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT4G23 CCGGCATCGATAAACGGAAGTCCGAGAAGTGAAGAGTTTGCCGATGGAGGAGGTTCTAGCGAGAGTCATCATCGCCAAGATTACATTTTCAATTCAAAGA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: RE_077 CCGGCATCGATAAACGGAAGTCCGAGAAGTGAAGAGTTTGCCGATGGAGGAGGTTCTAGCGAGAGTCGTCATCGCCAAGATTACATTTTCAATTCAAAGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT4G23 AAAGAAAGATGTTACCAAAGTGGTCAGAAAAAGTGAGAATAAGCCCAGAGAGAGGCTTAGAAGGACCTCAAGATGATGTCTTTAGCTGGAGAAAATATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 AAAGAAAGATGTTACCAAAGTGGTCAGAAAAAGTGAGAATAAGCCCAGAGAGAGGCTTAGAAGGACCTCAAGATGATGTCTTTAGCTGGAGAAAATATGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT4G23 TCAAAAAGACATTTTAGGCGCCAAATTCCCAAGGAGTTATTACAGATGCACACATCGTAGCACACAAAACTGTTGGGCAACGAAACAAGTCCAGAGATCA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: RE_077 TCAAAAAGACATTTTAGGCGCCAAATTCCCAAGGAGTTATTACAGATGCACACATCGTAGCACACAAAACTGTTGGGCAACGAAACAGGTCCAGAGATCA 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT4G23 GACGGGGATGCTACGGTTTTCGAAGTGACGTACAGAGGAACACACACTTGTTCGCAGGCGATCACAAGAACACCACCATTAGCCTCGCCGGAGAAGCGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 GACGGGGATGCTACGGTTTTCGAAGTGACGTACAGAGGAACACACACTTGTTCGCAGGCGATCACAAGAACACCACCATTAGCCTCGCCGGAGAAGCGAC 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT4G23 AAGACACCAGAGTCAAACCAGCCATTACCCAAAAGCCAAAGGATATTCTCGAGAGTCTTAAATCCAACTTAACCGTTCGAACCGATGGGCTTGATGATGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 AAGACACCAGAGTCAAACCAGCCATTACCCAAAAGCCAAAGGATATTCTCGAGAGTCTTAAATCCAACTTAACCGTTCGAACCGATGGGCTTGATGATGG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT4G23 TAAAGACGTTTTCTCGTTCCCTGATACGCCGCCGTTTTACAATTACGGAACTATCAACGGCGAGTTCGGCCACGTGGAGAGTTCTCCGATCTTCGACGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 TAAAGACGTTTTCTCGTTCCCTGATACGCCGCCGTTTTACAATTACGGAACTATCAACGGCGAGTTCGGCCACGTGGAGAGTTCTCCGATCTTCGACGTT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 AT4G23 GTTGACTGGTTCAATCCAACGGTCGAGATTGACACAACTTTCCCCGCGTTTTTACACGAGTCGATTTATTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : RE_077 GTTGACTGGTTCAATCCAACGGTCGAGATTGACACAACTTTCCCCGCGTTTTTACACGAGTCGATTTATTTT 910 920 930 940 950 960 970 10 20 30 40 50 60 70 80 90 100 AT4G23 MEGRDMLSWEQKTLLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILVKQIVSSYERSLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 MEGRDMLSWEQKTLLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILVKQIVSSYERSLLLLNWSSSPSVQLIPTPVTVVPVANPGSVPES 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT4G23 PASINGSPRSEEFADGGGSSESHHRQDYIFNSKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRS :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 PASINGSPRSEEFADGGGSSESRHRQDYIFNSKKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRS 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT4G23 DGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAITQKPKDILESLKSNLTVRTDGLDDGKDVFSFPDTPPFYNYGTINGEFGHVESSPIFDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_077 DGDATVFEVTYRGTHTCSQAITRTPPLASPEKRQDTRVKPAITQKPKDILESLKSNLTVRTDGLDDGKDVFSFPDTPPFYNYGTINGEFGHVESSPIFDV 210 220 230 240 250 260 270 280 290 300 310 320 AT4G23 VDWFNPTVEIDTTFPAFLHESIYY :::::::::::::::::::::::. RE_077 VDWFNPTVEIDTTFPAFLHESIYF 310 320

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