◆◆◆RE_0795 detail◆◆◆

Code name	RE_0795
Locus	AT2G16210
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列100%一致
comment	0520_20080229_0795_FR_55
sequence	>RE_0795_873bp ATGGCTACGAACGCTGGTTATCTTCGGTGCAAAGAAGAGCGCAAGAATGAAAGCTTCTTCAAGGTTGTTCAGAGTATAAATGTTTCTTCAGAAAACAAGA GAGCACTTCCACATGACTTTTCGAGAAGCTTCACCGACAAAGAGCTCTCACGTAAGATGAAGATAAGAGCGCAATGGGGAAACTCTTGGGAAGTAGGAAT TTCTAAAAACCCTAGATTTTACTTCATGGAGAAGTCTGGCTGGGAGAAGTTTGTGAGGGACAATGCTTTGGGAAACAGTGAGTTACTTACCTTCACTCAC AAAGGGAAAATGCACTTTACCGTGAACATCTTTAAGCTAGACGGGAAAGAGATGATGCAACCTCCACAATCCAGATCCTTCTTTGCTTCTTCAAGTCGTA TCAAAACAGAACAAGAGGAAAATGACATTAAGGAAGAGGTAGTGGTATCTTCTAACCGTGGCCAGACAACTGCAGCTGAATCTAAAGGAAGAAAGCTCAA CCTTGGGAAGAGGGCAGCTAAGGAATCCCAAAGTTCTAAAAGGACCGAGAAAGTGGTTAGAGCCCGAAGTGATTACGCTGGTGCCTCTTCATCTACTGCT GCAGCATTCACCATCTTGTTCAAGCAAGGATATCTCGTATTCCTGAGGATCCCGAATTCTGTATCGAAGGATCAAGTGCCGGATGAGAAAACAGTATTCA AGATCCATCACCCAAATGGGAAGAAATCATGGAATGTGGTTTATCTGGAGAGGTTTGGAGCTTTCTCTGGTGGATGGCGTCGTGTGGTTAAAGAGTATCC CCTTGCTGTTGGTGATACCTGCAAATTCACATTCATCAAACCAAAGGAGCTACTTCTAGTTGTCTCCAAACCC >RE_0795_translated MATNAGYLRCKEERKNESFFKVVQSINVSSENKRALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNSELLTFTH KGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTEQEENDIKEEVVVSSNRGQTTAAESKGRKLNLGKRAAKESQSSKRTEKVVRARSDYAGASSSTA AAFTILFKQGYLVFLRIPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGAFSGGWRRVVKEYPLAVGDTCKFTFIKPKELLLVVSKP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 872/873 (99.9%)（アミノ酸配列で100%）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G16 ATGGCTACGAACGCTGGTTATCTTCGGTGCAAAGAAGAGCGCAAGAATGAAAGCTTCTTCAAGGTTGTTCAGAGTATAAATGTTTCTTCAGAAAACAAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 ATGGCTACGAACGCTGGTTATCTTCGGTGCAAAGAAGAGCGCAAGAATGAAAGCTTCTTCAAGGTTGTTCAGAGTATAAATGTTTCTTCAGAAAACAAGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G16 GAGCACTTCCACATGACTTTTCGAGAAGCTTCACCGACAAAGAGCTCTCACGTAAGATGAAGATAAGAGCGCAATGGGGAAACTCTTGGGAAGTAGGAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 GAGCACTTCCACATGACTTTTCGAGAAGCTTCACCGACAAAGAGCTCTCACGTAAGATGAAGATAAGAGCGCAATGGGGAAACTCTTGGGAAGTAGGAAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G16 CTCTAAAAACCCTAGATTTTACTTCATGGAGAAGTCTGGCTGGGAGAAGTTTGTGAGGGACAATGCTTTGGGAAACAGTGAGTTACTTACCTTCACTCAC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 TTCTAAAAACCCTAGATTTTACTTCATGGAGAAGTCTGGCTGGGAGAAGTTTGTGAGGGACAATGCTTTGGGAAACAGTGAGTTACTTACCTTCACTCAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G16 AAAGGGAAAATGCACTTTACCGTGAACATCTTTAAGCTAGACGGGAAAGAGATGATGCAACCTCCACAATCCAGATCCTTCTTTGCTTCTTCAAGTCGTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 AAAGGGAAAATGCACTTTACCGTGAACATCTTTAAGCTAGACGGGAAAGAGATGATGCAACCTCCACAATCCAGATCCTTCTTTGCTTCTTCAAGTCGTA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G16 TCAAAACAGAACAAGAGGAAAATGACATTAAGGAAGAGGTAGTGGTATCTTCTAACCGTGGCCAGACAACTGCAGCTGAATCTAAAGGAAGAAAGCTCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 TCAAAACAGAACAAGAGGAAAATGACATTAAGGAAGAGGTAGTGGTATCTTCTAACCGTGGCCAGACAACTGCAGCTGAATCTAAAGGAAGAAAGCTCAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G16 CCTTGGGAAGAGGGCAGCTAAGGAATCCCAAAGTTCTAAAAGGACCGAGAAAGTGGTTAGAGCCCGAAGTGATTACGCTGGTGCCTCTTCATCTACTGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 CCTTGGGAAGAGGGCAGCTAAGGAATCCCAAAGTTCTAAAAGGACCGAGAAAGTGGTTAGAGCCCGAAGTGATTACGCTGGTGCCTCTTCATCTACTGCT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G16 GCAGCATTCACCATCTTGTTCAAGCAAGGATATCTCGTATTCCTGAGGATCCCGAATTCTGTATCGAAGGATCAAGTGCCGGATGAGAAAACAGTATTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 GCAGCATTCACCATCTTGTTCAAGCAAGGATATCTCGTATTCCTGAGGATCCCGAATTCTGTATCGAAGGATCAAGTGCCGGATGAGAAAACAGTATTCA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G16 AGATCCATCACCCAAATGGGAAGAAATCATGGAATGTGGTTTATCTGGAGAGGTTTGGAGCTTTCTCTGGTGGATGGCGTCGTGTGGTTAAAGAGTATCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 AGATCCATCACCCAAATGGGAAGAAATCATGGAATGTGGTTTATCTGGAGAGGTTTGGAGCTTTCTCTGGTGGATGGCGTCGTGTGGTTAAAGAGTATCC 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 AT2G16 CCTTGCTGTTGGTGATACCTGCAAATTCACATTCATCAAACCAAAGGAGCTACTTCTAGTTGTCTCCAAACCC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 CCTTGCTGTTGGTGATACCTGCAAATTCACATTCATCAAACCAAAGGAGCTACTTCTAGTTGTCTCCAAACCC 810 820 830 840 850 860 870 10 20 30 40 50 60 70 80 90 100 AT2G16 MATNAGYLRCKEERKNESFFKVVQSINVSSENKRALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNSELLTFTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 MATNAGYLRCKEERKNESFFKVVQSINVSSENKRALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRFYFMEKSGWEKFVRDNALGNSELLTFTH 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G16 KGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTEQEENDIKEEVVVSSNRGQTTAAESKGRKLNLGKRAAKESQSSKRTEKVVRARSDYAGASSSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 KGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTEQEENDIKEEVVVSSNRGQTTAAESKGRKLNLGKRAAKESQSSKRTEKVVRARSDYAGASSSTA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 AT2G16 AAFTILFKQGYLVFLRIPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGAFSGGWRRVVKEYPLAVGDTCKFTFIKPKELLLVVSKP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 AAFTILFKQGYLVFLRIPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGAFSGGWRRVVKEYPLAVGDTCKFTFIKPKELLLVVSKP 210 220 230 240 250 260 270 280 290

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