◆◆◆RE_0796 detail◆◆◆

Code name	RE_0796
Locus	AT2G35310
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列96.90%一致
comment	0520_third_0796_FR_55
sequence	>RE_0796_864bp ATGGCTAGAAACAGTGACAATGATATGTGCAAAGAAGAACGGAAGAGAGAGAGCTTCTTCAAGGTTCTACAGAGAGTTGATATTTCTTCTGAGAACATGA GAGCCCTTCCTTACAACTTTGTGAGAAGCTTCTCCAACAATGAGCTCTCTCGTAAGATGAAGATAAAAGCTCGATGGGGAAGTTCTTGGGAAGTAGAAAT CTGCAAAAATCCTAGATTCTATTTCATGGAGAAATCCGGATGCGAGAAGTTTGTGAGTGATAATGCCTTGAGATCCAGGCAGTCGCTTACCCTAACTCAC AAAGGGAATATGCGTTTTACAGTGAACATCTTCATGCAAGATGGCAAGGAGGTGCTACAGCCTCCACAATCCATGTCCTTCATGGCTTCTTCTAGGCCAC CTAAAAGAGAACAAGGAATACCTTCTCTTGCCACGACAATAGCAGCTGAATCTAATGGAGGAGGGAACTACAAAAGGAAGCTCAACTTTGAGAAGAAGAA AGCTGAGGAATCTCACAATTCCAAGAGGACCGATAAAGTCTTTAGTGTCCAGAGAGAATCTGCAGGTGCCTCTTCATCTTCTGTTGCAGAATTCTCCATG TTTATCAAAAAATCATACCTCATCTACATGTGGTTCCCGAAATCTGTTCAAAGTATTCATATGCCGAAGCAGAGAACGATTTTCAAGATACATCACCCAA ATATGAAGAAGTCATGGAATGTGGTTTACGTGGTGTCAGGGACGAAATCAAGCTTCTCTGCTGGATGGAAAGGTTTGGCTCAAGAATATCCTCTAGCAGT TGGAGACACTTGCAAGTTTTCATTCATCAAACAACACGAGCTGATTCTCTTTGTCTCAAAACCC >RE_0796_translated MARNSDNDMCKEERKRESFFKVLQRVDISSENMRALPYNFVRSFSNNELSRKMKIKARWGSSWEVEICKNPRFYFMEKSGCEKFVSDNALRSRQSLTLTH KGNMRFTVNIFMQDGKEVLQPPQSMSFMASSRPPKREQGIPSLATTIAAESNGGGNYKRKLNFEKKKAEESHNSKRTDKVFSVQRESAGASSSSVAEFSM FIKKSYLIYMWFPKSVQSIHMPKQRTIFKIHHPNMKKSWNVVYVVSGTKSSFSAGWKGLAQEYPLAVGDTCKFSFIKQHELILFVSKP
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 850/864 (98.4%)（アミノ酸配列で279/288 (96.9%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G35 ATGGCTAGAAACAGTGACAATGATATGTGCAAAGAAGAACGGAAGAGAGAGAGCTTCTTCAAGGTTCTACAGAGAGTTGATATTTCTTCTGAGAACATGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 ATGGCTAGAAACAGTGACAATGATATGTGCAAAGAAGAACGGAAGAGAGAGAGCTTCTTCAAGGTTCTACAGAGAGTTGATATTTCTTCTGAGAACATGA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G35 GAGCACTTCCTTACGACTTTGTGAGAAGCTTCTCCAACAATGAGCTCTCTCGTAAGATGAAGATAAAAGCTCGATGGGGAAGTTCTTGGGAAGTAGAAAT :::: ::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 GAGCCCTTCCTTACAACTTTGTGAGAAGCTTCTCCAACAATGAGCTCTCTCGTAAGATGAAGATAAAAGCTCGATGGGGAAGTTCTTGGGAAGTAGAAAT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G35 CTGCAAAAATCCAAGATTCTATTTCATGGAGAAATCCGGATGGGAGAAGTTTGTGAGTGACAATGCCTTGGGAGCCAGTGAGTTTCTTACCTTCACTCAC :::::::::::: ::::::::::::::::::::::::::::: ::::::::::::::::: ::::::::: :: :::: ::: :::::: : :::::: RE_079 CTGCAAAAATCCTAGATTCTATTTCATGGAGAAATCCGGATGCGAGAAGTTTGTGAGTGATAATGCCTTGAGATCCAGGCAGTCGCTTACCCTAACTCAC 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G35 AAAGGGAATATGCGTTTTACAGTGAACATCTTCATGCAAGATGGCAAGGAGATGCTACAGCCTCCACAATCCATGTCCTTCATGGCTTCTTCTAGGCCAC ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: RE_079 AAAGGGAATATGCGTTTTACAGTGAACATCTTCATGCAAGATGGCAAGGAGGTGCTACAGCCTCCACAATCCATGTCCTTCATGGCTTCTTCTAGGCCAC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G35 CTAAAAGAGAACAAGGAATACCTTCTCTTGCCACGACAATAGCAGCTGAATCTAATGGAGGAGGGAACTACAAAAGGAAGCTCAACTTTGAGAAGAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 CTAAAAGAGAACAAGGAATACCTTCTCTTGCCACGACAATAGCAGCTGAATCTAATGGAGGAGGGAACTACAAAAGGAAGCTCAACTTTGAGAAGAAGAA 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G35 AGCTGAGGAATCTCACAATTCCAAGAGGACCGATAAAGTCTTTAGTGTCCAGAGAGAATCTGCAGGTGCCTCTTCATCTTCTGTTGCAGAATTCTCCATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 AGCTGAGGAATCTCACAATTCCAAGAGGACCGATAAAGTCTTTAGTGTCCAGAGAGAATCTGCAGGTGCCTCTTCATCTTCTGTTGCAGAATTCTCCATG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G35 TTTATCAAAAAATCATACCTCATCTACATGTGGTTCCCGAAATCTGTTCAAAGTATTCATATGCCGAAGCAGAGAACGATTTTCAAGATACATCACCCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 TTTATCAAAAAATCATACCTCATCTACATGTGGTTCCCGAAATCTGTTCAAAGTATTCATATGCCGAAGCAGAGAACGATTTTCAAGATACATCACCCAA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G35 ATATGAAGAAGTCATGGAATGTGGTTTACGTGGTGTCAGGGACGAAATCAAGCTTCTCTGCTGGATGGAAAGGTTTGGCTCAAGAATATCCTCTAGCAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 ATATGAAGAAGTCATGGAATGTGGTTTACGTGGTGTCAGGGACGAAATCAAGCTTCTCTGCTGGATGGAAAGGTTTGGCTCAAGAATATCCTCTAGCAGT 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 AT2G35 TGGAGACACTTGCAAGTTTTCATTCATCAAACAACACGAGCTGATTCTCTTTGTCTCAAAACCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 TGGAGACACTTGCAAGTTTTCATTCATCAAACAACACGAGCTGATTCTCTTTGTCTCAAAACCC 810 820 830 840 850 860 10 20 30 40 50 60 70 80 90 100 AT2G35 MARNSDNDMCKEERKRESFFKVLQRVDISSENMRALPYDFVRSFSNNELSRKMKIKARWGSSWEVEICKNPRFYFMEKSGWEKFVSDNALGASEFLTFTH ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: ::::::::: . . :: :: RE_079 MARNSDNDMCKEERKRESFFKVLQRVDISSENMRALPYNFVRSFSNNELSRKMKIKARWGSSWEVEICKNPRFYFMEKSGCEKFVSDNALRSRQSLTLTH 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G35 KGNMRFTVNIFMQDGKEMLQPPQSMSFMASSRPPKREQGIPSLATTIAAESNGGGNYKRKLNFEKKKAEESHNSKRTDKVFSVQRESAGASSSSVAEFSM :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 KGNMRFTVNIFMQDGKEVLQPPQSMSFMASSRPPKREQGIPSLATTIAAESNGGGNYKRKLNFEKKKAEESHNSKRTDKVFSVQRESAGASSSSVAEFSM 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 AT2G35 FIKKSYLIYMWFPKSVQSIHMPKQRTIFKIHHPNMKKSWNVVYVVSGTKSSFSAGWKGLAQEYPLAVGDTCKFSFIKQHELILFVSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_079 FIKKSYLIYMWFPKSVQSIHMPKQRTIFKIHHPNMKKSWNVVYVVSGTKSSFSAGWKGLAQEYPLAVGDTCKFSFIKQHELILFVSKP 210 220 230 240 250 260 270 280

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