◆◆◆RE_0827 detail◆◆◆

Code name	RE_0827
Locus	AT3G14020
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0827_918bp ATGCAAGAGTTCCATAGTAGCAAAGATTCATTGCCTTGTCCTGCAACTTCTTGGGATAACTCTGTCTTCACCAACTCAAATGTCCAAGGATCATCATCCT TGACCGATAACAACACTTTAAGCTTGACAATGGAGATGAAACAAACTGGTTTTCAAATGCAGCACTATGATTCCTCCTCTACTCAATCCACTGGAGGAGA ATCATATAGTGAAGTTGCTAGCTTAAGTGAACCTACTAATCGTTATGGCCACAACATTGTTGTCACTCATCTCTCAGGTTACAAAGAAAACCCGGAAAAT CCTATTGGAAGTCATTCGATATCAAAGGTGTCTCAAGATTCAGTGGTTCTTCCTATTGAGGCGGCTTCTTGGCCTTTACACGGCAATGTAACGCCACATT TCAATGGTTTCTTGTCTTTTCCTTATGCATCACAACACACGCATCCTCAAATCAGAGGGTTGGTTCCGTCTAGAATGCCTTTGCCTCACAACATTCCAGA GAACGAACCAATTTTCGTCAATGCAAAACAGTACCAAGCCATTCTCCGCCGCAGAGAGCGCCGTGCAAAGCTTGAAGCTCAGAACAAGCTCATCAAAGTC CGCAAACCATATCTTCACGAGTCGCGGCACCTCCATGCACTAAAGAGAGTTAGAGGCTCTGGTGGACGTTTCCTCAACACAAAGAAGCATCAAGAATCAA ATTCCTCACTATCTCCTCCATTCTTGATTCCACCTCATGTCTTCAAGAACTCTCCAGGAAAGTTCCGGCAAATGGACATTTCAAGGGGTGGGGTTGTGTC TAGTGTCTCGACAACATCTTGCTCGGACATAACCGGGAACAACAACGACATGTTCCAGCAAAACCCACAATTCAGGTTCTCAGGTTATCCATCAAACCAC CATGTCTCAGTCCTCATG >RE_0827_translated MQEFHSSKDSLPCPATSWDNSVFTNSNVQGSSSLTDNNTLSLTMEMKQTGFQMQHYDSSSTQSTGGESYSEVASLSEPTNRYGHNIVVTHLSGYKENPEN PIGSHSISKVSQDSVVLPIEAASWPLHGNVTPHFNGFLSFPYASQHTHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKV RKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSPPFLIPPHVFKNSPGKFRQMDISRGGVVSSVSTTSCSDITGNNNDMFQQNPQFRFSGYPSNH HVSVLM
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 918/924 (99.4%)（アミノ酸配列で306/308 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT3G14 ATGCAAGAGTTCCATAGTAGCAAAGATTCATTGCCTTGTCCTGCAACTTCTTGGGATAACTCTGTCTTCACCAACTCAAATGTCCAAGGATCATCATCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 ATGCAAGAGTTCCATAGTAGCAAAGATTCATTGCCTTGTCCTGCAACTTCTTGGGATAACTCTGTCTTCACCAACTCAAATGTCCAAGGATCATCATCCT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G14 TGACCGATAACAACACTTTAAGCTTGACAATGGAGATGAAACAAACTGGTTTTCAAATGCAGCACTATGATTCCTCCTCTACTCAATCCACTGGAGGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 TGACCGATAACAACACTTTAAGCTTGACAATGGAGATGAAACAAACTGGTTTTCAAATGCAGCACTATGATTCCTCCTCTACTCAATCCACTGGAGGAGA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT3G14 ATCATATAGTGAAGTTGCTAGCTTAAGTGAACCTACTAATCGTTATGGCCACAACATTGTTGTCACTCATCTCTCAGGTTACAAAGAAAACCCGGAAAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 ATCATATAGTGAAGTTGCTAGCTTAAGTGAACCTACTAATCGTTATGGCCACAACATTGTTGTCACTCATCTCTCAGGTTACAAAGAAAACCCGGAAAAT 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT3G14 CCTATTGGAAGTCATTCGATATCAAAGGTGTCTCAAGATTCAGTGGTTCTTCCTATTGAGGCGGCTTCTTGGCCTTTACACGGCAATGTAACGCCACATT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 CCTATTGGAAGTCATTCGATATCAAAGGTGTCTCAAGATTCAGTGGTTCTTCCTATTGAGGCGGCTTCTTGGCCTTTACACGGCAATGTAACGCCACATT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT3G14 TCAATGGTTTCTTGTCTTTTCCTTATGCATCACAACACACGGTGCAGCATCCTCAAATCAGAGGGTTGGTTCCGTCTAGAATGCCTTTGCCTCACAACAT :::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 TCAATGGTTTCTTGTCTTTTCCTTATGCATCACAACACAC------GCATCCTCAAATCAGAGGGTTGGTTCCGTCTAGAATGCCTTTGCCTCACAACAT 410 420 430 440 450 460 470 480 490 510 520 530 540 550 560 570 580 590 600 AT3G14 TCCAGAGAACGAACCAATTTTCGTCAATGCAAAACAGTACCAAGCCATTCTCCGCCGCAGAGAGCGCCGTGCAAAGCTTGAAGCTCAGAACAAGCTCATC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 TCCAGAGAACGAACCAATTTTCGTCAATGCAAAACAGTACCAAGCCATTCTCCGCCGCAGAGAGCGCCGTGCAAAGCTTGAAGCTCAGAACAAGCTCATC 500 510 520 530 540 550 560 570 580 590 610 620 630 640 650 660 670 680 690 700 AT3G14 AAAGTCCGCAAACCATATCTTCACGAGTCGCGGCACCTCCATGCACTAAAGAGAGTTAGAGGCTCTGGTGGACGTTTCCTCAACACAAAGAAGCATCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 AAAGTCCGCAAACCATATCTTCACGAGTCGCGGCACCTCCATGCACTAAAGAGAGTTAGAGGCTCTGGTGGACGTTTCCTCAACACAAAGAAGCATCAAG 600 610 620 630 640 650 660 670 680 690 710 720 730 740 750 760 770 780 790 800 AT3G14 AATCAAATTCCTCACTATCTCCTCCATTCTTGATTCCACCTCATGTCTTCAAGAACTCTCCAGGAAAGTTCCGGCAAATGGACATTTCAAGGGGTGGGGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 AATCAAATTCCTCACTATCTCCTCCATTCTTGATTCCACCTCATGTCTTCAAGAACTCTCCAGGAAAGTTCCGGCAAATGGACATTTCAAGGGGTGGGGT 700 710 720 730 740 750 760 770 780 790 810 820 830 840 850 860 870 880 890 900 AT3G14 TGTGTCTAGTGTCTCGACAACATCTTGCTCGGACATAACCGGGAACAACAACGACATGTTCCAGCAAAACCCACAATTCAGGTTCTCAGGTTATCCATCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 TGTGTCTAGTGTCTCGACAACATCTTGCTCGGACATAACCGGGAACAACAACGACATGTTCCAGCAAAACCCACAATTCAGGTTCTCAGGTTATCCATCA 800 810 820 830 840 850 860 870 880 890 910 920 AT3G14 AACCACCATGTCTCAGTCCTCATG :::::::::::::::::::::::: RE_082 AACCACCATGTCTCAGTCCTCATG 900 910 10 20 30 40 50 60 70 80 90 100 AT3G14 MQEFHSSKDSLPCPATSWDNSVFTNSNVQGSSSLTDNNTLSLTMEMKQTGFQMQHYDSSSTQSTGGESYSEVASLSEPTNRYGHNIVVTHLSGYKENPEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 MQEFHSSKDSLPCPATSWDNSVFTNSNVQGSSSLTDNNTLSLTMEMKQTGFQMQHYDSSSTQSTGGESYSEVASLSEPTNRYGHNIVVTHLSGYKENPEN 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT3G14 PIGSHSISKVSQDSVVLPIEAASWPLHGNVTPHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLI ::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 PIGSHSISKVSQDSVVLPIEAASWPLHGNVTPHFNGFLSFPYASQHT--HPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLI 110 120 130 140 150 160 170 180 190 210 220 230 240 250 260 270 280 290 300 AT3G14 KVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSPPFLIPPHVFKNSPGKFRQMDISRGGVVSSVSTTSCSDITGNNNDMFQQNPQFRFSGYPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_082 KVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSLSPPFLIPPHVFKNSPGKFRQMDISRGGVVSSVSTTSCSDITGNNNDMFQQNPQFRFSGYPS 200 210 220 230 240 250 260 270 280 290 AT3G14 NHHVSVLM :::::::: RE_082 NHHVSVLM 300

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