◆◆◆RE_0840 detail◆◆◆

Code name	RE_0840
Locus	AT1G13300
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.10%一致
comment	0115_アミノ酸配列70%以上一致/0422_アミノ酸配列70%以上一致
sequence	>RE_0840_1032bp ATGATTAAAAAGTTCAGCAATATGGATTACAACCAGAAACGAGAGAGATGTGGGCAATACATCGAAGCCCTCGAAGAGGAACGTCGCAAGATTCATGTAT TTCAACGTGAACTTCCTCTTTGCTTAGACCTTGTAACTCAAGCGATCGAGGCATGTAAGAGGGAGTTACCGGAGATGACGACGGAGAATATGTACGGACA ACCAGAGTGCTCGGAGCAGACGACCGGAGAATGTGGGCCGGTCTTGGAGCAGTTTCTAACTATTAAAGATTCATCGACATCCAACGAAGAAGAAGATGAA GAATTCGACGATGAGCATGGAAATCACGATCCAGACAATGATTCCGAGGACAAGAACACGAAATCTGATTGGCTTAAGTCTGTTCAACTCTGGAATCAAC CCGACCACCCACTTCTTCCAAAAGAGGAAAGGTTGCAGCAGGAGACGATGACAAGAGATGAGAGTATGAGAAAAGATCCGATGGTGAACGGTGGCGAAGG GAGGAAGAGAGAGGCGGAGAAAGACGGAGGAGGAGGGAGAAAGCAAAGAAGGTGTTGGTCGTCGCAATTGCATAGACGCTTCTTGAACGCTCTTCAACAC TTAGGTGGACCTCATGTAGCTACGCCAAAGCAAATCAGGGAGTTTATGAAGGTTGATGGGTTAACCAATGATGAAGTTAAAAGCCATTTACAGAAATATA GACTGCATACAAGAAGGCCACGCCAAACAGTCCCTAACAACGGAAACTCTCGAACGCAACATTTCGTAGTCGTCGGTGGTTTATGGGTACCACAATTGGA CTACTCTACGGGCAAGACTACCGGAGGAGCCACCACCAGCGGTACCACCACAACCACCGGCATCTATGGAACCATGGCCGCACCGCCACCTCCACAATGG CCTAGCCATTCCAATTATAGACCGTCGATTATTGTGGACGAAGGATCGGGAAGTCATAGTGAAGGGGTCGTGGTCCGGTGTAGCTCGCCGGCGATGTCTT CTTCTACCCGTAATCATTACGTCAAGAATAAT >RE_0840_translated MIKKFSNMDYNQKRERCGQYIEALEEERRKIHVFQRELPLCLDLVTQAIEACKRELPEMTTENMYGQPECSEQTTGECGPVLEQFLTIKDSSTSNEEEDE EFDDEHGNHDPDNDSEDKNTKSDWLKSVQLWNQPDHPLLPKEERLQQETMTRDESMRKDPMVNGGEGRKREAEKDGGGGRKQRRCWSSQLHRRFLNALQH LGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRPRQTVPNNGNSRTQHFVVVGGLWVPQLDYSTGKTTGGATTSGTTTTTGIYGTMAAPPPPQW PSHSNYRPSIIVDEGSGSHSEGVVVRCSSPAMSSSTRNHYVKNN
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1029/1032 (99.7%)（アミノ酸配列で341/344 (99.1%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G13 ATGATTAAAAAGTTCAGCAATATGGATTACAACCAGAAACGAGAGAGATGTGGGCAATACATCGAAGCCCTCGAAGAGGAACGTCGCAAGATTCATGTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 ATGATTAAAAAGTTCAGCAATATGGATTACAACCAGAAACGAGAGAGATGTGGGCAATACATCGAAGCCCTCGAAGAGGAACGTCGCAAGATTCATGTAT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G13 TTCAACGTGAACTTCCTCTTTGCTTAGACCTTGTAACTCAAGCGATCGAGGCATGTAAGAGGGAGTTACCGGAGATGACGACGGAGAATATGTACGGACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 TTCAACGTGAACTTCCTCTTTGCTTAGACCTTGTAACTCAAGCGATCGAGGCATGTAAGAGGGAGTTACCGGAGATGACGACGGAGAATATGTACGGACA 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G13 ACCAGAGTGCTCGGAGCAGACGACCGGAGAATGTGGGCCGGTCTTGGAGCAGTTTCTAACTATTAAAGATTCATCGACATCCAACGAAGAAGAAGATGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 ACCAGAGTGCTCGGAGCAGACGACCGGAGAATGTGGGCCGGTCTTGGAGCAGTTTCTAACTATTAAAGATTCATCGACATCCAACGAAGAAGAAGATGAA 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G13 GAATTCGACGATGAGCATGGAAATCACGATCCAGACAATGATTCCGAGGACAAGAACACGAAATCTGATTGGCTTAAGTCTGTTCAACTCTGGAATCAAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GAATTCGACGATGAGCATGGAAATCACGATCCAGACAATGATTCCGAGGACAAGAACACGAAATCTGATTGGCTTAAGTCTGTTCAACTCTGGAATCAAC 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G13 CCGACCACCCACTTCTTCCAAAAGAGGAAAGGTTGCAGCAGGAGACGATGACAAGAGATGAGAGTATGAGAAAAGATCCGATGGTGAACGGTGGCGAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CCGACCACCCACTTCTTCCAAAAGAGGAAAGGTTGCAGCAGGAGACGATGACAAGAGATGAGAGTATGAGAAAAGATCCGATGGTGAACGGTGGCGAAGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G13 GAGGAAGAGAGAGGCGGAGAAAGACGGAGGAGGAGGGAGAAAGCAAAGAAGGTGTTGGTCGTCGCAATTGCATAGACGCTTCTTGAACGCTCTTCAACAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GAGGAAGAGAGAGGCGGAGAAAGACGGAGGAGGAGGGAGAAAGCAAAGAAGGTGTTGGTCGTCGCAATTGCATAGACGCTTCTTGAACGCTCTTCAACAC 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G13 TTAGGTGGACCTCATGTAGCTACGCCAAAGCAAATCAGGGAGTTTATGAAGGTTGATGGGTTAACCAATGATGAAGTTAAAAGCCATTTACAGAAATATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 TTAGGTGGACCTCATGTAGCTACGCCAAAGCAAATCAGGGAGTTTATGAAGGTTGATGGGTTAACCAATGATGAAGTTAAAAGCCATTTACAGAAATATA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G13 GACTGCATACAAGAAGGCCACGCCAAACAGTCCCTAACAACGGAAACTCTCAAACGCAACATTTCGTAGTCGTCGGTGGTTTATGGGTACCACAATCGGA ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: ::: RE_084 GACTGCATACAAGAAGGCCACGCCAAACAGTCCCTAACAACGGAAACTCTCGAACGCAACATTTCGTAGTCGTCGGTGGTTTATGGGTACCACAATTGGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G13 CTACTCTACGGGCAAGACTACCGGAGGAGCCACCACCAGCAGTACCACCACAACCACCGGCATCTATGGAACCATGGCCGCACCGCCACCTCCACAATGG :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CTACTCTACGGGCAAGACTACCGGAGGAGCCACCACCAGCGGTACCACCACAACCACCGGCATCTATGGAACCATGGCCGCACCGCCACCTCCACAATGG 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G13 CCTAGCCATTCCAATTATAGACCGTCGATTATTGTGGACGAAGGATCGGGAAGTCATAGTGAAGGGGTCGTGGTCCGGTGTAGCTCGCCGGCGATGTCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CCTAGCCATTCCAATTATAGACCGTCGATTATTGTGGACGAAGGATCGGGAAGTCATAGTGAAGGGGTCGTGGTCCGGTGTAGCTCGCCGGCGATGTCTT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 AT1G13 CTTCTACCCGTAATCATTACGTCAAGAATAAT :::::::::::::::::::::::::::::::: RE_084 CTTCTACCCGTAATCATTACGTCAAGAATAAT 1010 1020 1030 10 20 30 40 50 60 70 80 90 100 AT1G13 MIKKFSNMDYNQKRERCGQYIEALEEERRKIHVFQRELPLCLDLVTQAIEACKRELPEMTTENMYGQPECSEQTTGECGPVLEQFLTIKDSSTSNEEEDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 MIKKFSNMDYNQKRERCGQYIEALEEERRKIHVFQRELPLCLDLVTQAIEACKRELPEMTTENMYGQPECSEQTTGECGPVLEQFLTIKDSSTSNEEEDE 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G13 EFDDEHGNHDPDNDSEDKNTKSDWLKSVQLWNQPDHPLLPKEERLQQETMTRDESMRKDPMVNGGEGRKREAEKDGGGGRKQRRCWSSQLHRRFLNALQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 EFDDEHGNHDPDNDSEDKNTKSDWLKSVQLWNQPDHPLLPKEERLQQETMTRDESMRKDPMVNGGEGRKREAEKDGGGGRKQRRCWSSQLHRRFLNALQH 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G13 LGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRPRQTVPNNGNSQTQHFVVVGGLWVPQSDYSTGKTTGGATTSSTTTTTGIYGTMAAPPPPQW ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: :::::::::::::: ::::::::::::::::::: RE_084 LGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRPRQTVPNNGNSRTQHFVVVGGLWVPQLDYSTGKTTGGATTSGTTTTTGIYGTMAAPPPPQW 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT1G13 PSHSNYRPSIIVDEGSGSHSEGVVVRCSSPAMSSSTRNHYVKNN :::::::::::::::::::::::::::::::::::::::::::: RE_084 PSHSNYRPSIIVDEGSGSHSEGVVVRCSSPAMSSSTRNHYVKNN 310 320 330 340

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