◆◆◆RE_0845 detail◆◆◆

Code name	RE_0845
Locus	AT1G67710
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.80%一致
comment	0422_アミノ酸配列70%以上一致, AT1G67710.2_by_RIKE読まれた配列に有N
sequence	>RE_0845_1563bp ATGGAGAAAAGCGGCTTCTCTCCCGTCGGTCTAAGGGTTCTTGTCGTAGACGATGATCCAACTTGGCTCAAGATTCTCGAGAAAATGCTCAAGAAGTGTT CTTACGAAGTAACGACCTGTGGATTAGCTAGAGAGGCTTTGAGGTTGCTGAGGGAGCGTAAAGATGGATATGATATCGTGATCAGCGATGTGAACATGCC TGACATGGATGGTTTCAAGCTTCTTGAGCATGTTGGTCTTGAATTAGACCTCCCTGTAATAATGATGTCGGTGGACGGCGAAACAAGCCGAGTGATGAAG GGAGTGCAACACGGAGCTTGTGATTACCTCTTGAAGCCGATAAGAATGAAGGAGTTAAAGATTATATGGCAACATGTTCTGAGAAAGAAGCTTCAAGAAG TGAGAGATATCGAAGGCTGTGGATACGAAGGAGGAGCGGATTGGATCACTCGATACGATGAAGCACATTTTCTTGGAGGTGGTGAAGATGTTTCTTTTGG GAAAAAGAGAAAAGACTTTGACTTTGAGAAGAAGCTTCTTCAAGATGAGAGTGATCCATCATCTTCTTCTTCCAAGAAAGCTAGAGTTGTTTGGTCTTTT GAGCTTCATCATAAGTTTGTCAACGCCGTTAACCAAATCGGATGCGATCACAAAGCTGGTCCCAAGAAGATATTGGATCTCATGAATGTTCCATGGCTCA CTAGAGAAAATGTTGCAAGCCACCTTCAGAAATATAGACTTTACCTGAGCAGATTAGAGAAAGGAAAGGAGCTCAAGTGTTATTCAGGTGGCGTGAAGAA TGCGGATTCATCTCCAAAAGATGTCGAAGTGAATTCAGGCTACCAGAGCCCTGGGAGGAGCAGCTATGTATTCTCTGGAGGAAATTCTCTGATCCAAAAA GCAACAGAGATTGATCCAAAGCCACTTGCTTCAGCTTCTTTGTCTGACCTCAACACCGATGTGATCATGCCTCCGAAAACAAAAAAGACGCGTATAGGAT TTGATCCTCCCATTTCCTCCTCTGCGTTTGACTCTCTGCTTCCTTGGAATGATGTTCCAGAGGTCCTTGAATCGAAGCCGGTTCTGTATGAGAATAGCTT TCTCCAGCAACAACCATTGCCAAGTCAAAGTTCCTATGTTGCAAATTCTGCACCATCTCTCATGGAGGAGGAAATGAAGCCTCCTTATGAGACACCAGGA GGAGGCAGTAGTGTGAATGCAGATGAGTTTCTCATGCCACAAGACAAGATCCCTACTGTAACCCTTCAAGACTTGGATCCCTCTGCCATGAAGCTGCAGG AGTTCAACACAGAGGCGATTCTGAGAAGCTTGAACTGGGAACTTCCAGAATCACATCATTCTGTTTCTTTAGACACTGACTTAGACTTGACTTGGCTTCA AGGCGAGCGTTTTCTTGCAAACACCGGACTCCAGTTTCAAGATTACAGTAGTAGCCCATCACTCCTATCTGAGCTCCCAGCCCACCTTAATTGGTATGGA AATGAGCGGCTGCCTGACCCTGACGAGTATTCCTTCATGGTAGACCAAGGTTTATTCATATCT >RE_0845_translated MEKSGFSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMK GVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSF ELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGRSSYVFSGGNSLIQK ATEIDPKPLASASLSDLNTDVIMPPKTKKTRIGFDPPISSSAFDSLLPWNDVPEVLESKPVLYENSFLQQQPLPSQSSYVANSAPSLMEEEMKPPYETPG GGSSVNADEFLMPQDKIPTVTLQDLDPSAMKLQEFNTEAILRSLNWELPESHHSVSLDTDLDLTWLQGERFLANTGLQFQDYSSSPSLLSELPAHLNWYG NERLPDPDEYSFMVDQGLFIS
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1560/1563 (99.8%)（アミノ酸配列で520/521 (99.8%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G67 ATGGAGAAAAGCGGCTTCTCTCCCGTCGGTCTAAGGGTTCTTGTCGTAGACGATGATCCAACTTGGCTCAAGATTCTCGAGAAAATGCTCAAGAAGTGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 ATGGAGAAAAGCGGCTTCTCTCCCGTCGGTCTAAGGGTTCTTGTCGTAGACGATGATCCAACTTGGCTCAAGATTCTCGAGAAAATGCTCAAGAAGTGTT 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G67 CTTACGAAGTAACGACCTGTGGATTAGCTAGAGAGGCTTTGAGGTTGCTGAGGGAGCGTAAAGATGGATATGATATCGTGATCAGCGATGTGAACATGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CTTACGAAGTAACGACCTGTGGATTAGCTAGAGAGGCTTTGAGGTTGCTGAGGGAGCGTAAAGATGGATATGATATCGTGATCAGCGATGTGAACATGCC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G67 TGACATGGATGGTTTCAAGCTTCTTGAGCATGTTGGTCTTGAATTAGACCTCCCTGTAATAATGATGTCGGTGGACGGCGAAACAAGCCGAGTGATGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 TGACATGGATGGTTTCAAGCTTCTTGAGCATGTTGGTCTTGAATTAGACCTCCCTGTAATAATGATGTCGGTGGACGGCGAAACAAGCCGAGTGATGAAG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G67 GGAGTGCAACACGGAGCTTGTGATTACCTCTTGAAGCCGATAAGAATGAAGGAGTTAAAGATTATATGGCAACATGTTCTGAGAAAGAAGCTTCAAGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GGAGTGCAACACGGAGCTTGTGATTACCTCTTGAAGCCGATAAGAATGAAGGAGTTAAAGATTATATGGCAACATGTTCTGAGAAAGAAGCTTCAAGAAG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G67 TGAGAGATATCGAAGGCTGTGGATACGAAGGAGGAGCGGATTGGATCACTCGATACGATGAAGCACATTTTCTTGGAGGTGGTGAAGATGTTTCTTTTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 TGAGAGATATCGAAGGCTGTGGATACGAAGGAGGAGCGGATTGGATCACTCGATACGATGAAGCACATTTTCTTGGAGGTGGTGAAGATGTTTCTTTTGG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT1G67 GAAAAAGAGAAAAGACTTTGACTTTGAGAAGAAGCTTCTTCAAGATGAGAGTGATCCATCATCTTCTTCTTCCAAGAAAGCTAGAGTTGTTTGGTCTTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GAAAAAGAGAAAAGACTTTGACTTTGAGAAGAAGCTTCTTCAAGATGAGAGTGATCCATCATCTTCTTCTTCCAAGAAAGCTAGAGTTGTTTGGTCTTTT 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT1G67 GAGCTTCATCATAAGTTTGTCAACGCCGTTAACCAAATCGGATGCGATCACAAAGCTGGTCCCAAGAAGATATTGGATCTCATGAATGTTCCATGGCTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GAGCTTCATCATAAGTTTGTCAACGCCGTTAACCAAATCGGATGCGATCACAAAGCTGGTCCCAAGAAGATATTGGATCTCATGAATGTTCCATGGCTCA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT1G67 CTAGAGAAAATGTTGCAAGCCACCTTCAGAAATATAGACTTTACCTGAGCAGATTAGAGAAAGGAAAGGAGCTCAAGTGTTATTCAGGTGGCGTGAAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CTAGAGAAAATGTTGCAAGCCACCTTCAGAAATATAGACTTTACCTGAGCAGATTAGAGAAAGGAAAGGAGCTCAAGTGTTATTCAGGTGGCGTGAAGAA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT1G67 TGCGGATTCATCTCCAAAAGATGTCGAAGTGAATTCAGGCTACCAAAGCCCTGGGAGGAGCAGCTATGTATTCTCTGGAGGAAATTCTCTGATCCAAAAA ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 TGCGGATTCATCTCCAAAAGATGTCGAAGTGAATTCAGGCTACCAGAGCCCTGGGAGGAGCAGCTATGTATTCTCTGGAGGAAATTCTCTGATCCAAAAA 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT1G67 GCAACAGAGATTGATCCAAAGCCACTTGCTTCAGCTTCTTTGTCTGACCTCAACACCGATGTGATCATGCCTCCGAAAACAAAAAAGACGCGTATAGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GCAACAGAGATTGATCCAAAGCCACTTGCTTCAGCTTCTTTGTCTGACCTCAACACCGATGTGATCATGCCTCCGAAAACAAAAAAGACGCGTATAGGAT 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT1G67 TTGATCCTCCCATTTCCTCCTCTGCGTTTGACTCTCTGCTTCCTTGGAATGATGTTCCAGAGGTCCTTGAATCGAAGCCGGTTCTGTATGAGAATAGCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 TTGATCCTCCCATTTCCTCCTCTGCGTTTGACTCTCTGCTTCCTTGGAATGATGTTCCAGAGGTCCTTGAATCGAAGCCGGTTCTGTATGAGAATAGCTT 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 AT1G67 TCTCCAGCAACAACCATTGCCAAGTCAAAGTTCCTATGTTGCAAATTCTGCACCATCTCTCATGGAGGAGGAAATGAAGCCTCCTTATGAGACACCAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : RE_084 TCTCCAGCAACAACCATTGCCAAGTCAAAGTTCCTATGTTGCAAATTCTGCACCATCTCTCATGGAGGAGGAAATGAAGCCTCCTTATGAGACACCAGGA 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 AT1G67 GGAGGCAGTAGTGTGAATGCAGATGAGTTTCTCATGCCACAAGACAAGATCCCTACTGTAACCCTTCAAGATTTGGATCCCTCTGCCATGAAGCTGCAGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: RE_084 GGAGGCAGTAGTGTGAATGCAGATGAGTTTCTCATGCCACAAGACAAGATCCCTACTGTAACCCTTCAAGACTTGGATCCCTCTGCCATGAAGCTGCAGG 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 AT1G67 AGTTCAACACAGAGGCGATTCTGAGAAGCTTGAACTGGGAACTTCCAGAATCACATCATTCTGTTTCTTTAGACACTGACTTAGACTTGACTTGGCTTCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 AGTTCAACACAGAGGCGATTCTGAGAAGCTTGAACTGGGAACTTCCAGAATCACATCATTCTGTTTCTTTAGACACTGACTTAGACTTGACTTGGCTTCA 1310 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 AT1G67 AGGCGAGCGTTTTCTTGCAAACACCGGACTCCAGTTTCAAGATTACAGTAGTAGCCCATCACTCCTATCTGAGCTCCCAGCCCACCTTAATTGGTATGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 AGGCGAGCGTTTTCTTGCAAACACCGGACTCCAGTTTCAAGATTACAGTAGTAGCCCATCACTCCTATCTGAGCTCCCAGCCCACCTTAATTGGTATGGA 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 AT1G67 AATGAGCGGCTGCCTGACCCTGACGAGTATTCCTTCATGGTAGACCAAGGTTTATTCATATCT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 AATGAGCGGCTGCCTGACCCTGACGAGTATTCCTTCATGGTAGACCAAGGTTTATTCATATCT 1510 1520 1530 1540 1550 1560 10 20 30 40 50 60 70 80 90 100 AT1G67 MEKSGFSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 MEKSGFSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMK 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT1G67 GVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSF 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT1G67 ELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGRSSYVFSGGNSLIQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 ELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGRSSYVFSGGNSLIQK 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT1G67 ATEIDPKPLASASLSDLNTDVIMPPKTKKTRIGFDPPISSSAFDSLLPWNDVPEVLESKPVLYENSFLQQQPLPSQSSYVANSAPSLMEEEMKPPYETPA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 ATEIDPKPLASASLSDLNTDVIMPPKTKKTRIGFDPPISSSAFDSLLPWNDVPEVLESKPVLYENSFLQQQPLPSQSSYVANSAPSLMEEEMKPPYETPG 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT1G67 GGSSVNADEFLMPQDKIPTVTLQDLDPSAMKLQEFNTEAILRSLNWELPESHHSVSLDTDLDLTWLQGERFLANTGLQFQDYSSSPSLLSELPAHLNWYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GGSSVNADEFLMPQDKIPTVTLQDLDPSAMKLQEFNTEAILRSLNWELPESHHSVSLDTDLDLTWLQGERFLANTGLQFQDYSSSPSLLSELPAHLNWYG 410 420 430 440 450 460 470 480 490 500 510 520 AT1G67 NERLPDPDEYSFMVDQGLFIS ::::::::::::::::::::: RE_084 NERLPDPDEYSFMVDQGLFIS 510 520

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