◆◆◆RE_0847 detail◆◆◆

Code name	RE_0847
Locus	AT1G69580
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列98.50%一致
comment	0115_アミノ酸配列70%以上一致
sequence	>RE_0847_996bp ATGGAGATCAACAATAATGCCAACAATACTAATACTACTATTGATAATCACAAGGCAAAGATGAGCCTTGTGTTGTCAACGGATGCTAAGCCAAGGTTGA AATGGACTTGTGATCTTCATCACAAATTCATCGAAGCCGTTAATCAACTTGGAGGACCTAACAAAGCAACACCTAAGGGTTTGATGAAGGTTATGGAGAT TCCTGGGCTTACCTTATACCATCTCAAGAGCCATTTACAGAAATATCGGTTAGGGAAGAGCATGAAGTTCGATGATAACAAGCTAGAAGTTTCCTCTGCA TCAGAGAATCAAGAAGTTGAGAGTAAAAACGATTCAAGAGATCTCCGAGGCTGCAGTGTCACCGAAGAAAACAGCAATCCAGCTAAAGAAGGGCTACAAA TCACAGAGGCTTTACAAATGCAGATGGAAGTTCAGAAGAAACTTCATGAACAAATCGAAGTTCAGAGGCATTTGCAGGTGAAGATTGAGGCACAAGGAAA GTATCTACAGTCCGTTTTAATGAAAGCTCAACAAACTCTCGCTGGCTACTCATCTTCAAATCTCGGCATGGATTTTGCGAGGACCGAGCTCTCTAGATTA GCTTCAATGGTGAACAGAGGCTGTCCAAGCACTTCGTTCTCAGAGCTAACGCAAGTAGAAGAAGAAGAAGAAGGTTTCTTGTGGTACAAGAAACCAGAAA ACAGAGGAATTAGTCAGCTGAGATGTTCAGTAGAGAGCTCGTTGACATCTTCAGAGACCTCAGAGACAAAACTGGATACTGACAATAACCTTAATAAATC GATTGAACTTCCGTTGATGGAGATCAACTCGGAAGTGATGAAGGGGAAGAAGAGAAGCATAAACGACGTCGTTTGCGTGGAGCAGCCTCTAATGAAGAGA GCTTTTGGAGTTGATGATGATGAGCATTTGAAGTTGAGTTTGAATACTTACAAGAAAGACATGGAGGCGTGTACGAACATAGGACTAAGGTTTAAT >RE_0847_translated MEINNNANNTNTTIDNHKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKYRLGKSMKFDDNKLEVSSA SENQEVESKNDSRDLRGCSVTEENSNPAKEGLQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFARTELSRL ASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSSETSETKLDTDNNLNKSIELPLMEINSEVMKGKKRSINDVVCVEQPLMKR AFGVDDDEHLKLSLNTYKKDMEACTNIGLRFN
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 995/1008 (98.7%)（アミノ酸配列で331/336 (98.5%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT1G69 ATGTGTTTATTAATGGAGATCAACAATAATGCCAACAATACTAATACTACTATTGATAATCACAAGGCAAAGATGAGCCTTGTGTTGTCAACGGATGCTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 ------------ATGGAGATCAACAATAATGCCAACAATACTAATACTACTATTGATAATCACAAGGCAAAGATGAGCCTTGTGTTGTCAACGGATGCTA 10 20 30 40 50 60 70 80 110 120 130 140 150 160 170 180 190 200 AT1G69 AGCCAAGGTTGAAATGGACTTGTGATCTTCATCACAAATTCATCGAAGCCGTTAATCAACTTGGAGGACCTAACAAAGCAACACCTAAGGGTTTGATGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 AGCCAAGGTTGAAATGGACTTGTGATCTTCATCACAAATTCATCGAAGCCGTTAATCAACTTGGAGGACCTAACAAAGCAACACCTAAGGGTTTGATGAA 90 100 110 120 130 140 150 160 170 180 210 220 230 240 250 260 270 280 290 300 AT1G69 GGTTATGGAGATTCCTGGGCTTACCTTATACCATCTCAAGAGCCATTTACAGAAATATCGGTTAGGGAAGAGCATGAAGTTCGATGATAACAAGCTAGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GGTTATGGAGATTCCTGGGCTTACCTTATACCATCTCAAGAGCCATTTACAGAAATATCGGTTAGGGAAGAGCATGAAGTTCGATGATAACAAGCTAGAA 190 200 210 220 230 240 250 260 270 280 310 320 330 340 350 360 370 380 390 400 AT1G69 GTTTCCTCTGCATCAGAGAATCAAGAAGTTGAGAGTAAAAACGATTCAAGAGATCTCCGAGGCTGCAGTGTCACCGAAGAAAACAGCAATCCAGCTAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GTTTCCTCTGCATCAGAGAATCAAGAAGTTGAGAGTAAAAACGATTCAAGAGATCTCCGAGGCTGCAGTGTCACCGAAGAAAACAGCAATCCAGCTAAAG 290 300 310 320 330 340 350 360 370 380 410 420 430 440 450 460 470 480 490 500 AT1G69 AAGGGCTACAAATCACAGAGGCTTTACAAATGCAGATGGAAGTTCAGAAGAAACTTCATGAACAAATCGAAGTTCAGAGGCATTTGCAGGTGAAGATTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 AAGGGCTACAAATCACAGAGGCTTTACAAATGCAGATGGAAGTTCAGAAGAAACTTCATGAACAAATCGAAGTTCAGAGGCATTTGCAGGTGAAGATTGA 390 400 410 420 430 440 450 460 470 480 510 520 530 540 550 560 570 580 590 600 AT1G69 GGCACAAGGAAAGTATCTACAGTCCGTTTTAATGAAAGCTCAACAAACTCTCGCTGGCTACTCATCTTCAAATCTCGGCATGGATTTTGCGAGGACCGAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 GGCACAAGGAAAGTATCTACAGTCCGTTTTAATGAAAGCTCAACAAACTCTCGCTGGCTACTCATCTTCAAATCTCGGCATGGATTTTGCGAGGACCGAG 490 500 510 520 530 540 550 560 570 580 610 620 630 640 650 660 670 680 690 700 AT1G69 CTCTCTAGATTAGCTTCAATGGTGAACAGAGGCTGTCCAAGCACTTCGTTCTCAGAGCTAACGCAAGTAGAAGAAGAAGAAGAAGGTTTCTTGTGGTACA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CTCTCTAGATTAGCTTCAATGGTGAACAGAGGCTGTCCAAGCACTTCGTTCTCAGAGCTAACGCAAGTAGAAGAAGAAGAAGAAGGTTTCTTGTGGTACA 590 600 610 620 630 640 650 660 670 680 710 720 730 740 750 760 770 780 790 800 AT1G69 AGAAACCAGAAAACAGAGGAATTAGTCAGCTGAGATGTTCAGTAGAGAGCTCGTTGACATCTTCAGAGACCTCAGAGACAAAACTGGATACTGACAATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 AGAAACCAGAAAACAGAGGAATTAGTCAGCTGAGATGTTCAGTAGAGAGCTCGTTGACATCTTCAGAGACCTCAGAGACAAAACTGGATACTGACAATAA 690 700 710 720 730 740 750 760 770 780 810 820 830 840 850 860 870 880 890 900 AT1G69 CCTTAATAAATCGATTGAACTTCCGTTGATGGAGATCAACTCGGAAGTGATGAAGGGGAAGAAGAGAAGCATAAACGACGTCGTTTGCGTGGAGCAGCCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CCTTAATAAATCGATTGAACTTCCGTTGATGGAGATCAACTCGGAAGTGATGAAGGGGAAGAAGAGAAGCATAAACGACGTCGTTTGCGTGGAGCAGCCT 790 800 810 820 830 840 850 860 870 880 910 920 930 940 950 960 970 980 990 1000 AT1G69 CTAATGAAGAGAGCTTTTGGAGTTGATGATGATGAGCATTTGAAGTTGAGTTTGAATACTTACAAGAAAGACATGGAGGCGTGTACGAACATAGGACTAG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 CTAATGAAGAGAGCTTTTGGAGTTGATGATGATGAGCATTTGAAGTTGAGTTTGAATACTTACAAGAAAGACATGGAGGCGTGTACGAACATAGGACTAA 890 900 910 920 930 940 950 960 970 980 AT1G69 GGTTTAAT :::::::: RE_084 GGTTTAAT 990 10 20 30 40 50 60 70 80 90 100 AT1G69 MCLLMEINNNANNTNTTIDNHKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKYRLGKSMKFDDNKLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 ----MEINNNANNTNTTIDNHKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKYRLGKSMKFDDNKLE 10 20 30 40 50 60 70 80 90 110 120 130 140 150 160 170 180 190 200 AT1G69 VSSASENQEVESKNDSRDLRGCSVTEENSNPAKEGLQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFARTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 VSSASENQEVESKNDSRDLRGCSVTEENSNPAKEGLQITEALQMQMEVQKKLHEQIEVQRHLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFARTE 100 110 120 130 140 150 160 170 180 190 210 220 230 240 250 260 270 280 290 300 AT1G69 LSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSSETSETKLDTDNNLNKSIELPLMEINSEVMKGKKRSINDVVCVEQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_084 LSRLASMVNRGCPSTSFSELTQVEEEEEGFLWYKKPENRGISQLRCSVESSLTSSETSETKLDTDNNLNKSIELPLMEINSEVMKGKKRSINDVVCVEQP 200 210 220 230 240 250 260 270 280 290 310 320 330 AT1G69 LMKRAFGVDDDEHLKLSLNTYKKDMEACTNIGLGFN ::::::::::::::::::::::::::::::::: :: RE_084 LMKRAFGVDDDEHLKLSLNTYKKDMEACTNIGLRFN 300 310 320 330

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