◆◆◆RE_0850 detail◆◆◆

Code name	RE_0850
Locus	AT2G01760
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.50%一致
comment	0428_アミノ酸配列70%以上一致
sequence	>RE_0850_1146bp ATGCCGATCAACGATCAGTTTCCTAGTGGGTTAAGAATACTCGTTGTAGACGATGATACTTCATGCTTGTTCATTCTCGAGAAAATGCTTCCCCGTCTCA TGTACCAAGTTACAATTTGCTCACAAGCTGATGTTGCGTTAACCATTCTAAGAGAAAGAAAAGACAGTTTTGATTTGGTGCTAAGTGATGTTCATATGCC TGGTATGAATGGTTACAATCTTCTTCAACAAGTTGGTCTTCTTGAAATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAAGAACAACTACAGTCATG ACTGGAATCAACCATGGAGCTTGTGATTATCTAATCAAACCTATTCGTCCTGAAGAGCTTAAGAACATTTGGCAACATGTTGTTAGAAGGAAATGTGTGA TGAAGAAAGAGCTTCGAAGTTCTCAAGCTTTAGAGGATAACAAGAACAGTGGTAGCCTCGAGACTGTTGTTGTTTCGGTTAGTGAATGCTCAGAGGAAAG TTTGATGAAATGTAGGAATAAGAAGAAGAAGAAGAAGAGAAGTGTTGATAGAGATGATAATGAAGATGATCTTCTTCTTGATCCTGGAAACTCGAAGAAG TCACGCGTTGTTTGGTCTATTGAATTGCATCAACAATTCGTTAATGCCGTAAACAAACTTGGAATTGACAAAGCTGTACCAAGGCGGATTCTCGAGTTGA TGAATGTTCCTGGTTTAAGCAGAGAAAACGTGGCTAGTCATTTACAGAAGTTCCGATTGTATTTGAAGAGATTAAGCGGTGAAGCTTCGCAGAGTAATGA CTCTGAGTCTACCAAAAGATATGAAAACATTCAAGCTCTGGTTTCCTCAGGACAATTACATCCACAGACATTAGCTGCATTGTTTGGTCAACCAATAGAC AATCATCACTCTGCTAGTTTTGGAGTTTGGATTCCTAATGACAATCTTGGTAGATCTCAAAATGAACACTTCTCGGTTGATGTATCATCCGCTTCTAACC GTCCTGTTTCTGTGGCGGTTCATGGTCTATCTTCCTCAGCAAATTTCAGACAGAGAGGTGACGTTAACAACAACAGAATCAGACAAGGGTATGGATCAAA TGTCAATGAAGAATCTTGGATCTTGGAAAGATCTTCAAGACAAAGA >RE_0850_translated MPINDQFPSGLRILVVDDDTSCLFILEKMLPRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVM TGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKK SRVVWSIELHQQFVNAVNKLGIDKAVPRRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQSNDSESTKRYENIQALVSSGQLHPQTLAALFGQPID NHHSASFGVWIPNDNLGRSQNEHFSVDVSSASNRPVSVAVHGLSSSANFRQRGDVNNNRIRQGYGSNVNEESWILERSSRQR
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1144/1146 (99.8%)（アミノ酸配列で380/382 (99.5%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G01 ATGCCGATCAACGATCAGTTTCCTAGTGGGTTAAGAATACTCGTTGTAGACGATGATACTTCATGCTTGTTCATTCTCGAGAAAATGCTTCTCCGTCTCA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: RE_085 ATGCCGATCAACGATCAGTTTCCTAGTGGGTTAAGAATACTCGTTGTAGACGATGATACTTCATGCTTGTTCATTCTCGAGAAAATGCTTCCCCGTCTCA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G01 TGTACCAAGTTACAATTTGCTCACAAGCTGATGTTGCGTTAACCATTCTAAGAGAAAGAAAAGACAGTTTTGATTTGGTGCTAAGTGATGTTCATATGCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGTACCAAGTTACAATTTGCTCACAAGCTGATGTTGCGTTAACCATTCTAAGAGAAAGAAAAGACAGTTTTGATTTGGTGCTAAGTGATGTTCATATGCC 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G01 TGGTATGAATGGTTACAATCTTCTTCAACAAGTTGGTCTTCTTGAAATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAAGAACAACTACAGTCATG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGGTATGAATGGTTACAATCTTCTTCAACAAGTTGGTCTTCTTGAAATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAAGAACAACTACAGTCATG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G01 ACTGGAATCAACCATGGAGCTTGTGATTATCTAATCAAACCTATTCGTCCTGAAGAGCTTAAGAACATTTGGCAACATGTTGTTAGAAGGAAATGTGTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ACTGGAATCAACCATGGAGCTTGTGATTATCTAATCAAACCTATTCGTCCTGAAGAGCTTAAGAACATTTGGCAACATGTTGTTAGAAGGAAATGTGTGA 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G01 TGAAGAAAGAGCTTCGAAGTTCTCAAGCTTTAGAGGATAACAAGAACAGTGGTAGCCTCGAGACTGTTGTTGTTTCGGTTAGTGAATGCTCAGAGGAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGAAGAAAGAGCTTCGAAGTTCTCAAGCTTTAGAGGATAACAAGAACAGTGGTAGCCTCGAGACTGTTGTTGTTTCGGTTAGTGAATGCTCAGAGGAAAG 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G01 TTTGATGAAATGTAGGAATAAGAAGAAGAAGAAGAAGAGAAGTGTTGATAGAGATGATAATGAAGATGATCTTCTTCTTGATCCTGGAAACTCGAAGAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TTTGATGAAATGTAGGAATAAGAAGAAGAAGAAGAAGAGAAGTGTTGATAGAGATGATAATGAAGATGATCTTCTTCTTGATCCTGGAAACTCGAAGAAG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G01 TCACGCGTTGTTTGGTCTATTGAATTGCATCAACAATTCGTTAATGCCGTAAACAAACTTGGAATTGACAAAGCTGTACCAAAGCGGATTCTCGAGTTGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: RE_085 TCACGCGTTGTTTGGTCTATTGAATTGCATCAACAATTCGTTAATGCCGTAAACAAACTTGGAATTGACAAAGCTGTACCAAGGCGGATTCTCGAGTTGA 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G01 TGAATGTTCCTGGTTTAAGCAGAGAAAACGTGGCTAGTCATTTACAGAAGTTCCGATTGTATTTGAAGAGATTAAGCGGTGAAGCTTCGCAGAGTAATGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGAATGTTCCTGGTTTAAGCAGAGAAAACGTGGCTAGTCATTTACAGAAGTTCCGATTGTATTTGAAGAGATTAAGCGGTGAAGCTTCGCAGAGTAATGA 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G01 CTCTGAGTCTACCAAAAGATATGAAAACATTCAAGCTCTGGTTTCCTCAGGACAATTACATCCACAGACATTAGCTGCATTGTTTGGTCAACCAATAGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 CTCTGAGTCTACCAAAAGATATGAAAACATTCAAGCTCTGGTTTCCTCAGGACAATTACATCCACAGACATTAGCTGCATTGTTTGGTCAACCAATAGAC 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G01 AATCATCACTCTGCTAGTTTTGGAGTTTGGATTCCTAATGACAATCTTGGTAGATCTCAAAATGAACACTTCTCGGTTGATGTATCATCCGCTTCTAACC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 AATCATCACTCTGCTAGTTTTGGAGTTTGGATTCCTAATGACAATCTTGGTAGATCTCAAAATGAACACTTCTCGGTTGATGTATCATCCGCTTCTAACC 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 AT2G01 GTCCTGTTTCTGTGGCGGTTCATGGTCTATCTTCCTCAGCAAATTTCAGACAGAGAGGTGACGTTAACAACAACAGAATCAGACAAGGGTATGGATCAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 GTCCTGTTTCTGTGGCGGTTCATGGTCTATCTTCCTCAGCAAATTTCAGACAGAGAGGTGACGTTAACAACAACAGAATCAGACAAGGGTATGGATCAAA 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 AT2G01 TGTCAATGAAGAATCTTGGATCTTGGAAAGATCTTCAAGACAAAGA :::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGTCAATGAAGAATCTTGGATCTTGGAAAGATCTTCAAGACAAAGA 1110 1120 1130 1140 10 20 30 40 50 60 70 80 90 100 AT2G01 MPINDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVM :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 MPINDQFPSGLRILVVDDDTSCLFILEKMLPRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVM 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G01 TGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKK 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G01 SRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQSNDSESTKRYENIQALVSSGQLHPQTLAALFGQPID :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 SRVVWSIELHQQFVNAVNKLGIDKAVPRRILELMNVPGLSRENVASHLQKFRLYLKRLSGEASQSNDSESTKRYENIQALVSSGQLHPQTLAALFGQPID 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 AT2G01 NHHSASFGVWIPNDNLGRSQNEHFSVDVSSASNRPVSVAVHGLSSSANFRQRGDVNNNRIRQGYGSNVNEESWILERSSRQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 NHHSASFGVWIPNDNLGRSQNEHFSVDVSSASNRPVSVAVHGLSSSANFRQRGDVNNNRIRQGYGSNVNEESWILERSSRQR 310 320 330 340 350 360 370 380

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