◆◆◆RE_0854 detail◆◆◆

Code name	RE_0854
Locus	AT2G38300
Forward primer
Reverse primer
Alignment with TAIR7CDS	アミノ酸配列99.40%一致
comment	0229_アミノ酸配列70%以上一致
sequence	>RE_0854_1020bp ATGATTCCAAGTATGGAGGGAGGCGGGAAGACTAACAGAGAAGAAGAGGAGGAGGAAGAGGAAGAAGAAGAAGAAGGTGAAGAGAGTAAGGTTTCAAGCA ATAGTACAGTGGAAGAGAGCGACAAGAAGACTAAGGTTAGGCCTTATGTGAGATCTAAAGTCCCTCGACTCCGGTGGACTCCTGATCTTCATCTTCGCTT TGTCCGCGCCGTTGAGAGGCTTGGAGGTCAAGAAAGAGCAACTCCAAAGTTGGTTCGTCAGATGATGAACATCAAAGGGCTTAGTATTGCTCATGTCAAG AGCCATCTACAGATGTACAGAAGCAAGAAGATAGATGATCAAGGTCAAGCTATAGCTGGTCACAAACATCTCTTCGAGACTTCCACAGATCGAAATATTT ATAAACTAAGTCAGCTACCGATGTTCCGAGGCTATAATCATAACCATGATTCTCCATTCAGATATGGAAGTAAAATTTCAAATGCTTCTTTGTGGAACTC TAGCTCTCAAGGAACAGAAAGGAGTTTGATAGACCAAATTAGGCCCGGTTTAATCCGCAACGCGTCGGTTAGCAATAACATCCGTGGTAGTGATTATTGG ACTAACAACAAGTCTTTCCAAAACATCTACTCTTCTTCAATTCCTAATCACTTTCCGAAACTACGACACGATCATCACGAACGGACCAATTCAGTCACAT TCAACAGCATTCAAGGACACTCAAGAACTTTTCAAAAGTTCCATAACGGTGTTGAGGAGAACACTAATCATTCTTATTGTAGCAAGACAAATGGCAAAAG AGACGCAAGTAGGAGCATTGATCTTGATCTATCTCTTAAGCTAAGACAACCGGAGAAGACAATTTTGGAAGAGACAGAAACAGCAGCAACAACAACGGAT CAAACGTTGTCCTTGTCGCTATGTCCAGGGTCGTCTTCGTGGAAAAAGAGCCGACTGATGGAAGATGAAGAGGATCGGACGGTTAAGATTGGTCAGGAGA GTACTCTGGATCTGACTCTA >RE_0854_translated MIPSMEGGGKTNREEEEEEEEEEEEGEESKVSSNSTVEESDKKTKVRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVK SHLQMYRSKKIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMFRGYNHNHDSPFRYGSKISNASLWNSSSQGTERSLIDQIRPGLIRNASVSNNIRGSDYW TNNKSFQNIYSSSIPNHFPKLRHDHHERTNSVTFNSIQGHSRTFQKFHNGVEENTNHSYCSKTNGKRDASRSIDLDLSLKLRQPEKTILEETETAATTTD QTLSLSLCPGSSSWKKSRLMEDEEDRTVKIGQESTLDLTL
Alignment	◆CDS（TAIRver.9）_without_stop_codonとのalignment◆ 1018/1020 (99.8%)（アミノ酸配列で338/340 (99.4%)）一致しました。 10 20 30 40 50 60 70 80 90 100 AT2G38 ATGATTCCAAGTATGGAGGGAGGCGGGAAGACTAACAGAGAAGAAGAGGAGGAGGAAGAGGAAGAAGAAGAAGAAGGTGAAGAGAGTAAGGTTTCAAGCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ATGATTCCAAGTATGGAGGGAGGCGGGAAGACTAACAGAGAAGAAGAGGAGGAGGAAGAGGAAGAAGAAGAAGAAGGTGAAGAGAGTAAGGTTTCAAGCA 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G38 ATAGTACAGTGGAAGAGAGCGACAAGAAGACTAAGGTTAGGCCTTATGTGAGATCTAAAGTCCCTCGACTCCGGTGGACTCCTGATCTTCATCTTCGCTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ATAGTACAGTGGAAGAGAGCGACAAGAAGACTAAGGTTAGGCCTTATGTGAGATCTAAAGTCCCTCGACTCCGGTGGACTCCTGATCTTCATCTTCGCTT 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G38 TGTCCGCGCCGTTGAGAGGCTTGGAGGTCAAGAAAGAGCAACTCCAAAGTTGGTTCGTCAGATGATGAACATCAAAGGGCTTAGTATTGCTCATGTCAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TGTCCGCGCCGTTGAGAGGCTTGGAGGTCAAGAAAGAGCAACTCCAAAGTTGGTTCGTCAGATGATGAACATCAAAGGGCTTAGTATTGCTCATGTCAAG 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 AT2G38 AGCCATCTACAGATGTACAGAAGCAAGAAGATAGATGATCAAGGTCAAGCTATAGCTGGTCACAAACATCTCTTCGAGACTTCCACAGATCGAAATATTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 AGCCATCTACAGATGTACAGAAGCAAGAAGATAGATGATCAAGGTCAAGCTATAGCTGGTCACAAACATCTCTTCGAGACTTCCACAGATCGAAATATTT 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 AT2G38 ATAAACTAAGTCAGCTACCGATGTTCCGAGGCTATAATCATAACCATGATTCTCCATTCAGATATGGAAGTAAAATTTCAAATGCTTCTTTGTGGAACTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ATAAACTAAGTCAGCTACCGATGTTCCGAGGCTATAATCATAACCATGATTCTCCATTCAGATATGGAAGTAAAATTTCAAATGCTTCTTTGTGGAACTC 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 AT2G38 TAGCTCTCAAGGAACAGAAAGGAGTTTGATAGACCAAATTAGGCCCGGTTTAATCCGCAACGCGTCGGTTAGCAATAACATCCGTGGTAGTGATTATTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TAGCTCTCAAGGAACAGAAAGGAGTTTGATAGACCAAATTAGGCCCGGTTTAATCCGCAACGCGTCGGTTAGCAATAACATCCGTGGTAGTGATTATTGG 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 AT2G38 ACTAACAACAAGTCTTTCCAAAACATCTACTCTTCTTCAATTTCTAATCACTTTCCGAAACTACGACACGATCATCACGAACGGACCAATTCAGTCACAT :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 ACTAACAACAAGTCTTTCCAAAACATCTACTCTTCTTCAATTCCTAATCACTTTCCGAAACTACGACACGATCATCACGAACGGACCAATTCAGTCACAT 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 AT2G38 TCAACAGCATTCAAGGACACTCAAGAACTTTTCAAAAGTTCCATAACGGTGTTGAGGAGAACACTAATCATTCTTATTGTAGCAAGACAAATGGCAAAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TCAACAGCATTCAAGGACACTCAAGAACTTTTCAAAAGTTCCATAACGGTGTTGAGGAGAACACTAATCATTCTTATTGTAGCAAGACAAATGGCAAAAG 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 AT2G38 AGACGCAAGTAGGAGCATTGATCTTGATCTATCTCTTAAGCTAAGACAACCGGAGAAGACAATTTTGGAAGAGACAGAAACAGCAGCAACAACAACGGAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 AGACGCAAGTAGGAGCATTGATCTTGATCTATCTCTTAAGCTAAGACAACCGGAGAAGACAATTTTGGAAGAGACAGAAACAGCAGCAACAACAACGGAT 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 AT2G38 CAAACGTTGTCCTTGTCGCTATGTCCAGGGTCGTCTTCGTGGAAAAAGAGCCGACTGATGAAAGATGAAGAGGATCGGACGGTTAAGATTGGTCAGGAGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: RE_085 CAAACGTTGTCCTTGTCGCTATGTCCAGGGTCGTCTTCGTGGAAAAAGAGCCGACTGATGGAAGATGAAGAGGATCGGACGGTTAAGATTGGTCAGGAGA 910 920 930 940 950 960 970 980 990 1000 1010 1020 AT2G38 GTACTCTGGATCTGACTCTA :::::::::::::::::::: RE_085 GTACTCTGGATCTGACTCTA 1010 1020 10 20 30 40 50 60 70 80 90 100 AT2G38 MIPSMEGGGKTNREEEEEEEEEEEEGEESKVSSNSTVEESDKKTKVRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 MIPSMEGGGKTNREEEEEEEEEEEEGEESKVSSNSTVEESDKKTKVRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVK 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 AT2G38 SHLQMYRSKKIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMFRGYNHNHDSPFRYGSKISNASLWNSSSQGTERSLIDQIRPGLIRNASVSNNIRGSDYW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 SHLQMYRSKKIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMFRGYNHNHDSPFRYGSKISNASLWNSSSQGTERSLIDQIRPGLIRNASVSNNIRGSDYW 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 AT2G38 TNNKSFQNIYSSSISNHFPKLRHDHHERTNSVTFNSIQGHSRTFQKFHNGVEENTNHSYCSKTNGKRDASRSIDLDLSLKLRQPEKTILEETETAATTTD :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: RE_085 TNNKSFQNIYSSSIPNHFPKLRHDHHERTNSVTFNSIQGHSRTFQKFHNGVEENTNHSYCSKTNGKRDASRSIDLDLSLKLRQPEKTILEETETAATTTD 210 220 230 240 250 260 270 280 290 300 310 320 330 340 AT2G38 QTLSLSLCPGSSSWKKSRLMKDEEDRTVKIGQESTLDLTL ::::::::::::::::::::.::::::::::::::::::: RE_085 QTLSLSLCPGSSSWKKSRLMEDEEDRTVKIGQESTLDLTL 310 320 330 340

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